| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458468
Identifier: 77458468
GI number: 77458468
Start: 2571289
End: 2571714
Strand: Direct
Name: 77458468
Synonym: Pfl01_2241
Alternate gene names: NA
Gene position: 2571289-2571714 (Clockwise)
Preceding gene: 77458466
Following gene: 77458469
Centisome position: 39.94
GC content: 54.23
Gene sequence:
>426_bases ATGAGCCTTTCGCCATTCCACCTCGCCATCCCCGTTTACAACCTGGCTGCAGCCCGCACTTTTTACGGTGAGGTCTTCGG CCTGGAAGAGGGTCGTTCCAGTAACCAATGGGTCGACTTCAACTTTTACGGGCATCAACTGGTGATTCACGAACACCCGA AAACCGCGTCTCAGGAAAGCGTTCACAGCAACCCGGTCGACGGGCACGATGTTCCTGTTCCTCACTTCGGCATCATCCTG GGATGGGAAGAGTGGGAAGCGCTGGCAGAGCGCCTCAAGTCTTTCGGTACCGAATTTGTGATCGAACCTTACATTCGATT CAAAGGACAGGTTGGCGAGCAAGCCACGATGTTCCTGTTCGACCCTTGCGGCAATGCCCTCGAATTCAAGGCCTTCAAGG ATATGAGCCAGCTCTTCGCCAAGTAA
Upstream 100 bases:
>100_bases AAATATTAGTTGTGTTTCTGAGAAATATATATTGATTTTTTTGCTGTCAGTGTCGCCCTACGATGTGCTCACCAACCACA AAAACCGTATCGGAGTCCTG
Downstream 100 bases:
>100_bases GAAACGCAATGGCACAACGGCGTTGTGCCATTTGATCTCAAGTGAGCTGGAAGCTCATGACTCTAGCAACTGCCGAATTG ATGCAGTCCTTTCATTCCAA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase Domain Protein; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Extradiol Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLSPFHLAIPVYNLAAARTFYGEVFGLEEGRSSNQWVDFNFYGHQLVIHEHPKTASQESVHSNPVDGHDVPVPHFGIIL GWEEWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLFDPCGNALEFKAFKDMSQLFAK
Sequences:
>Translated_141_residues MSLSPFHLAIPVYNLAAARTFYGEVFGLEEGRSSNQWVDFNFYGHQLVIHEHPKTASQESVHSNPVDGHDVPVPHFGIIL GWEEWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLFDPCGNALEFKAFKDMSQLFAK >Mature_140_residues SLSPFHLAIPVYNLAAARTFYGEVFGLEEGRSSNQWVDFNFYGHQLVIHEHPKTASQESVHSNPVDGHDVPVPHFGIILG WEEWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLFDPCGNALEFKAFKDMSQLFAK
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16023; Mature: 15892
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSPFHLAIPVYNLAAARTFYGEVFGLEEGRSSNQWVDFNFYGHQLVIHEHPKTASQES CCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCC VHSNPVDGHDVPVPHFGIILGWEEWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLF CCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFKDMSQLFAK CCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLSPFHLAIPVYNLAAARTFYGEVFGLEEGRSSNQWVDFNFYGHQLVIHEHPKTASQES CCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCC VHSNPVDGHDVPVPHFGIILGWEEWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLF CCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFKDMSQLFAK CCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA