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The map label for this gene is araC [C]

Identifier: 77458464

GI number: 77458464

Start: 2567516

End: 2568448

Strand: Direct

Name: araC [C]

Synonym: Pfl01_2237

Alternate gene names: 77458464

Gene position: 2567516-2568448 (Clockwise)

Preceding gene: 77458459

Following gene: 77458466

Centisome position: 39.88

GC content: 58.63

Gene sequence:

>933_bases
ATGACGTCACAATGCCGTGTGCCCACCTACGTCATGCAGCAACGCAGCGAGATGATGGACTTCTATATTCGTGACAAGAA
AGGTCGCCGCGCCGAGACCAGCCCGCATCGACACGAATACTTCCAGATCCAGATCAACCTCGGCGGCGACACGGTGCAGC
ATATTGGCAACGCGGTTCGTCCATTTCCGCGTAACGCGCTGGCATTCATCCTGCCGCACCGCGTGCACGTGATCCCGCAT
CCGGCGGACAGCAACTTCATGGTGATCAACTTTTCCCAGACCTTTCTGCTGCCGCATTTGCAGTGCGACCCGATGGATCT
GGAGGAGGTATCAATTCTCCTGGCGCCCGAACTGTCGCCGTTCCGCTTTCAGGAGCATCTGGATTTCATACTGGGGGATG
AGGACTTCAACGAGGTCTGTGGCTTGATCGAACAGATGCGCGGCCTGGACGAGAATCGTCAGTTCGGTACACGCGAAGTG
CTCAAGGGATTGCTGCTGCAACTGGTAGGCAAGGTGTGCGTCCTGTATGCCGAACCGCTCAAGCGCCTGGCAGAAGAGAA
TGCCGCGCAAGCCAGTCGGCGGGATGCGCTGAGCCGGATGTTCGAGTATCTGCGCAAGAACATTGCCGACCCCGATCTCA
ATCTGATCAAGGTCGCGGCGGCGACCTATCTGTCACCGACCTATCTCACGCACTGGCTGCGCAAGGAAATCGGCAAGACC
TTCACCGAGCTGGTGCTGGAACGCAGAATGCACGCGGCACGCAATTACCTGCTCAATGGAACCCGGCCGGTGGGCGAGGT
GGCGAGGTTGTGTGGGTTTGCGGATGAAGCTTATTTCTCACGACGGTTTCGCCAGATCCACGGACAGCCACCTGGACAGT
TCCGCCGTCGGCAGCTGGACCCGGACACTCCGCAGTCACCTGTAGATGCCTGA

Upstream 100 bases:

>100_bases
CTGCTTGAAGGGCTGGCGCCGAACCTTCAAGATGAGCCACGCCGATTACTCGGCAACGCCAGGAAAACCTGCCTGAGTAC
CTGTCGAGGATTCTCAAGAA

Downstream 100 bases:

>100_bases
TCGGCTAATGCGACGAAACATAAACCGAGGTCGAGGTCGGCGCAGGCAACGCATACGTTGCCTTCATCCACTCGATCTCC
GCCAGCGGTGTCCTGCCAAA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Two Component AraC Family Transcriptional Regulator; Response Regulator Receiver Protein; Two-Component Response Regulator; Regulatory Helix-Turn-Helix Protein AraC Family Protein; Response Regulator; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTSQCRVPTYVMQQRSEMMDFYIRDKKGRRAETSPHRHEYFQIQINLGGDTVQHIGNAVRPFPRNALAFILPHRVHVIPH
PADSNFMVINFSQTFLLPHLQCDPMDLEEVSILLAPELSPFRFQEHLDFILGDEDFNEVCGLIEQMRGLDENRQFGTREV
LKGLLLQLVGKVCVLYAEPLKRLAEENAAQASRRDALSRMFEYLRKNIADPDLNLIKVAAATYLSPTYLTHWLRKEIGKT
FTELVLERRMHAARNYLLNGTRPVGEVARLCGFADEAYFSRRFRQIHGQPPGQFRRRQLDPDTPQSPVDA

Sequences:

>Translated_310_residues
MTSQCRVPTYVMQQRSEMMDFYIRDKKGRRAETSPHRHEYFQIQINLGGDTVQHIGNAVRPFPRNALAFILPHRVHVIPH
PADSNFMVINFSQTFLLPHLQCDPMDLEEVSILLAPELSPFRFQEHLDFILGDEDFNEVCGLIEQMRGLDENRQFGTREV
LKGLLLQLVGKVCVLYAEPLKRLAEENAAQASRRDALSRMFEYLRKNIADPDLNLIKVAAATYLSPTYLTHWLRKEIGKT
FTELVLERRMHAARNYLLNGTRPVGEVARLCGFADEAYFSRRFRQIHGQPPGQFRRRQLDPDTPQSPVDA
>Mature_309_residues
TSQCRVPTYVMQQRSEMMDFYIRDKKGRRAETSPHRHEYFQIQINLGGDTVQHIGNAVRPFPRNALAFILPHRVHVIPHP
ADSNFMVINFSQTFLLPHLQCDPMDLEEVSILLAPELSPFRFQEHLDFILGDEDFNEVCGLIEQMRGLDENRQFGTREVL
KGLLLQLVGKVCVLYAEPLKRLAEENAAQASRRDALSRMFEYLRKNIADPDLNLIKVAAATYLSPTYLTHWLRKEIGKTF
TELVLERRMHAARNYLLNGTRPVGEVARLCGFADEAYFSRRFRQIHGQPPGQFRRRQLDPDTPQSPVDA

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35818; Mature: 35686

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQCRVPTYVMQQRSEMMDFYIRDKKGRRAETSPHRHEYFQIQINLGGDTVQHIGNAVR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCC
PFPRNALAFILPHRVHVIPHPADSNFMVINFSQTFLLPHLQCDPMDLEEVSILLAPELSP
CCCCCHHHHCCCCEEEEEECCCCCCEEEEEECHHHHCCCCCCCCCCHHHHHEEECCCCCH
FRFQEHLDFILGDEDFNEVCGLIEQMRGLDENRQFGTREVLKGLLLQLVGKVCVLYAEPL
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRLAEENAAQASRRDALSRMFEYLRKNIADPDLNLIKVAAATYLSPTYLTHWLRKEIGKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FTELVLERRMHAARNYLLNGTRPVGEVARLCGFADEAYFSRRFRQIHGQPPGQFRRRQLD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDTPQSPVDA
CCCCCCCCCC
>Mature Secondary Structure 
TSQCRVPTYVMQQRSEMMDFYIRDKKGRRAETSPHRHEYFQIQINLGGDTVQHIGNAVR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCC
PFPRNALAFILPHRVHVIPHPADSNFMVINFSQTFLLPHLQCDPMDLEEVSILLAPELSP
CCCCCHHHHCCCCEEEEEECCCCCCEEEEEECHHHHCCCCCCCCCCHHHHHEEECCCCCH
FRFQEHLDFILGDEDFNEVCGLIEQMRGLDENRQFGTREVLKGLLLQLVGKVCVLYAEPL
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRLAEENAAQASRRDALSRMFEYLRKNIADPDLNLIKVAAATYLSPTYLTHWLRKEIGKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FTELVLERRMHAARNYLLNGTRPVGEVARLCGFADEAYFSRRFRQIHGQPPGQFRRRQLD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDTPQSPVDA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA