| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fhuA [H]
Identifier: 77458459
GI number: 77458459
Start: 2560811
End: 2562937
Strand: Direct
Name: fhuA [H]
Synonym: Pfl01_2232
Alternate gene names: 77458459
Gene position: 2560811-2562937 (Clockwise)
Preceding gene: 77458458
Following gene: 77458464
Centisome position: 39.77
GC content: 60.79
Gene sequence:
>2127_bases ATGCGTCGAACTCTGCTGTCCATCTGCGTGTTGCAAACGTTGTCTCCCTTGGCGTGGGCCGAGCCATCCGATTCAACGGT GTCAGCGCTGGAGCTGGAGGCAACCGATGTGGTCGGTACCGCGGATTACGAAAGAGCGGACGGCCCGGTACAGGGATATC GCGCGACCCGTTCGGCCAGCGCTACCCGAACCGATACCTCGATCCATGAAACCCCGCAGTCGATCAGCGTCGTCACCAAA GATGCGGTCGAAGACATCGGTGCTACCCGGCTGCAGGACGCACTGGATTACGCGGGCGGAGTAGGGCGAGCCAACAATTT CGGCGGCCAGGGACTGACCACGTTCACCGTGCGCGGATTTACCACTGGCGAGTTCTACCGCAATGGTTTCCCGATCAACC GCGGTTATCCGAACATGCCGGATGCCAACACCATCGAGCGACTTGAGGTCCTGCGCGGTCCGGCGACCATGCTCTACGGC CGGGGCGATCCGGGCGGTACCTTCAATGTCGTTTCCAAACAACCGTTGCCCGAGCGTACGGTCACACTCGGCAGCCAGCT GAATGACCAAGGCATGCGCCGCGGCACCCTGGATGCTTCCGGTCCGCTCGATGAAGAGGGGCGTCTGGCCTATCGCCTGA ACGTGGTGGGCGAGGGCGGCGATACCTTCCGCGATCACGTCGAAACCGAACGCTACGGCGTGACCCCCGTGCTGACCTGG CAAGCCAGCGATGACACCCGAGTGATCTTCGAGGGTGACTTCATGCGCAACAACCATCCGCTGGACCGGGGCGCGACGCG TTATCCCCGGCAGATCGGCACTGCCTCCCGCGACACCTTCTTCGGTGAACCGGACGCTGGCAAGTTGCACAACGACAACA ACATGGCGCAATTGCGCTTCGAGCATGTGCTCAATGAGGACTGGACGCTCGGCGGTGGCTTCCAGTGGCTCGACGGTACC TTGCAGGGCAATGCCATTGAAGCCAACGGCATTGCCGCCGACGGCCGGACTCTGGGACGAAATTTCAACTACCGCAAGCT GGAGTGGACGGACAAGGACACCCAACTCAACCTGACCGGTCACTTCTCCACCGGCGGCCTGCAGCACACATTGCTGACCG GTATCGAATACGAAGATTACGACTACCAGTCGATCATCCAGCGCTCCAGCGGCGCGGTGAGTGCCTATCCGATCGATATC TTCAATCCGGTCTATGGGCAGCCCCGTCCGGCACTGACACGCACCCCGACCCACGACAAGGAAAACCTCAAGACCTACGC CGCGTTCGTACAGGACCAGGTGGCCCTGACCGATCGGCTGAAAGTCCTGGCCGGGGCACGTTTTGAACGCTTTGAACACG ACTACGAAACCTACGTGCCCGGCGGCAAGAACTGGCAGGCCAGTGACAATGCCGTCACGCCCCGCGTCGGTGTGACCTAT GACCTAACCGACACCCTCGCGATTTACGCGGACACCGCGCGTTCCTTCAAGCCCAATACCGGCGCAAGCCGACAGGGCGG CGGCTTCGAACCGGAGAAAGGCAAGTCCTGGGAGATGGGCGTCAAATGGGAAGCGCTGGATCATCAGCTGAGCGTTGACG CGGCGATCTATCAGATTGAAAAGCGCAATGTCCTGACCACTGACCCGGTGGACTCGACGTTCAGCGTGGCTGCCGGGGAA GTGCGCAGCCGGGGATTCGACCTCAATGTCGCCGGCAACCTGACCCCCGAGTGGCGTGTCATCGGGGGGTACGCCTACGT CGATGCCGAGGTGACCAAGGACAACGTGATCCGCTCCGGCACGCGACTGATGAACATCCCGAAAAACAGCTTCAGCCTGC TCAACGTCTATGAGTTCCAGGACGGTGCCCTCAGTGGTCTGGGTCTGGGGACAGGCGTCAAATATGTCGATGAGCGCGCG GGTCAAACGGCCAACACTGCATTTTCGATGGGGAGCTACACCGTTGTCGACCTGCTCAGCTACTACAAGGTCAATGACAA GTTACGTCTCAATCTCGACCTGAAGAACCTGTTTGACCGGGACTACGACGAGGGCGCATTCGGTAACGTCTACGCCTATC CGGGGGCACCGAGAACGGTGCAGGTCGGCATTTCCTACACGTTGTAG
Upstream 100 bases:
>100_bases TGGGAATGCCTATCAATTGCGCGGCGGGTGGTATACCATCCGCCGCGTTTCGCTGGCAGTTATCCCCTTCGTTCTGGCTT ATCCGTAAGGTTCTCCCCTC
Downstream 100 bases:
>100_bases TCCGATCGGGTCTGAAATCCATCATCGGGGGCAGCGGCCCCCGATGACTGTGAGGCTCAGCCGGTCACACATCCTTGCGG AGTCTTTCCGGCAAAACTGT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 708; Mature: 708
Protein sequence:
>708_residues MRRTLLSICVLQTLSPLAWAEPSDSTVSALELEATDVVGTADYERADGPVQGYRATRSASATRTDTSIHETPQSISVVTK DAVEDIGATRLQDALDYAGGVGRANNFGGQGLTTFTVRGFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATMLYG RGDPGGTFNVVSKQPLPERTVTLGSQLNDQGMRRGTLDASGPLDEEGRLAYRLNVVGEGGDTFRDHVETERYGVTPVLTW QASDDTRVIFEGDFMRNNHPLDRGATRYPRQIGTASRDTFFGEPDAGKLHNDNNMAQLRFEHVLNEDWTLGGGFQWLDGT LQGNAIEANGIAADGRTLGRNFNYRKLEWTDKDTQLNLTGHFSTGGLQHTLLTGIEYEDYDYQSIIQRSSGAVSAYPIDI FNPVYGQPRPALTRTPTHDKENLKTYAAFVQDQVALTDRLKVLAGARFERFEHDYETYVPGGKNWQASDNAVTPRVGVTY DLTDTLAIYADTARSFKPNTGASRQGGGFEPEKGKSWEMGVKWEALDHQLSVDAAIYQIEKRNVLTTDPVDSTFSVAAGE VRSRGFDLNVAGNLTPEWRVIGGYAYVDAEVTKDNVIRSGTRLMNIPKNSFSLLNVYEFQDGALSGLGLGTGVKYVDERA GQTANTAFSMGSYTVVDLLSYYKVNDKLRLNLDLKNLFDRDYDEGAFGNVYAYPGAPRTVQVGISYTL
Sequences:
>Translated_708_residues MRRTLLSICVLQTLSPLAWAEPSDSTVSALELEATDVVGTADYERADGPVQGYRATRSASATRTDTSIHETPQSISVVTK DAVEDIGATRLQDALDYAGGVGRANNFGGQGLTTFTVRGFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATMLYG RGDPGGTFNVVSKQPLPERTVTLGSQLNDQGMRRGTLDASGPLDEEGRLAYRLNVVGEGGDTFRDHVETERYGVTPVLTW QASDDTRVIFEGDFMRNNHPLDRGATRYPRQIGTASRDTFFGEPDAGKLHNDNNMAQLRFEHVLNEDWTLGGGFQWLDGT LQGNAIEANGIAADGRTLGRNFNYRKLEWTDKDTQLNLTGHFSTGGLQHTLLTGIEYEDYDYQSIIQRSSGAVSAYPIDI FNPVYGQPRPALTRTPTHDKENLKTYAAFVQDQVALTDRLKVLAGARFERFEHDYETYVPGGKNWQASDNAVTPRVGVTY DLTDTLAIYADTARSFKPNTGASRQGGGFEPEKGKSWEMGVKWEALDHQLSVDAAIYQIEKRNVLTTDPVDSTFSVAAGE VRSRGFDLNVAGNLTPEWRVIGGYAYVDAEVTKDNVIRSGTRLMNIPKNSFSLLNVYEFQDGALSGLGLGTGVKYVDERA GQTANTAFSMGSYTVVDLLSYYKVNDKLRLNLDLKNLFDRDYDEGAFGNVYAYPGAPRTVQVGISYTL >Mature_708_residues MRRTLLSICVLQTLSPLAWAEPSDSTVSALELEATDVVGTADYERADGPVQGYRATRSASATRTDTSIHETPQSISVVTK DAVEDIGATRLQDALDYAGGVGRANNFGGQGLTTFTVRGFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATMLYG RGDPGGTFNVVSKQPLPERTVTLGSQLNDQGMRRGTLDASGPLDEEGRLAYRLNVVGEGGDTFRDHVETERYGVTPVLTW QASDDTRVIFEGDFMRNNHPLDRGATRYPRQIGTASRDTFFGEPDAGKLHNDNNMAQLRFEHVLNEDWTLGGGFQWLDGT LQGNAIEANGIAADGRTLGRNFNYRKLEWTDKDTQLNLTGHFSTGGLQHTLLTGIEYEDYDYQSIIQRSSGAVSAYPIDI FNPVYGQPRPALTRTPTHDKENLKTYAAFVQDQVALTDRLKVLAGARFERFEHDYETYVPGGKNWQASDNAVTPRVGVTY DLTDTLAIYADTARSFKPNTGASRQGGGFEPEKGKSWEMGVKWEALDHQLSVDAAIYQIEKRNVLTTDPVDSTFSVAAGE VRSRGFDLNVAGNLTPEWRVIGGYAYVDAEVTKDNVIRSGTRLMNIPKNSFSLLNVYEFQDGALSGLGLGTGVKYVDERA GQTANTAFSMGSYTVVDLLSYYKVNDKLRLNLDLKNLFDRDYDEGAFGNVYAYPGAPRTVQVGISYTL
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=744, Percent_Identity=29.9731182795699, Blast_Score=265, Evalue=1e-71, Organism=Escherichia coli, GI1787024, Length=705, Percent_Identity=26.9503546099291, Blast_Score=198, Evalue=8e-52, Organism=Escherichia coli, GI1787344, Length=755, Percent_Identity=23.1788079470199, Blast_Score=146, Evalue=5e-36, Organism=Escherichia coli, GI1787723, Length=683, Percent_Identity=23.5724743777452, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI1790743, Length=302, Percent_Identity=26.4900662251656, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77938; Mature: 77938
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTLLSICVLQTLSPLAWAEPSDSTVSALELEATDVVGTADYERADGPVQGYRATRSAS CCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECEEEECCCCCCCCCCCCCHHHHCCCC ATRTDTSIHETPQSISVVTKDAVEDIGATRLQDALDYAGGVGRANNFGGQGLTTFTVRGF CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC TTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATMLYGRGDPGGTFNVVSKQPLPERT CCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCHHH VTLGSQLNDQGMRRGTLDASGPLDEEGRLAYRLNVVGEGGDTFRDHVETERYGVTPVLTW HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEE QASDDTRVIFEGDFMRNNHPLDRGATRYPRQIGTASRDTFFGEPDAGKLHNDNNMAQLRF ECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEH EHVLNEDWTLGGGFQWLDGTLQGNAIEANGIAADGRTLGRNFNYRKLEWTDKDTQLNLTG HHHCCCCCEECCCCEEECCEECCCEEECCCEECCCHHHCCCCCEEEEEECCCCCEEEEEE HFSTGGLQHTLLTGIEYEDYDYQSIIQRSSGAVSAYPIDIFNPVYGQPRPALTRTPTHDK ECCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCH ENLKTYAAFVQDQVALTDRLKVLAGARFERFEHDYETYVPGGKNWQASDNAVTPRVGVTY HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEE DLTDTLAIYADTARSFKPNTGASRQGGGFEPEKGKSWEMGVKWEALDHQLSVDAAIYQIE ECCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCEEEEEEE KRNVLTTDPVDSTFSVAAGEVRSRGFDLNVAGNLTPEWRVIGGYAYVDAEVTKDNVIRSG CCCEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEEEECCCCHHHHCC TRLMNIPKNSFSLLNVYEFQDGALSGLGLGTGVKYVDERAGQTANTAFSMGSYTVVDLLS CEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHH YYKVNDKLRLNLDLKNLFDRDYDEGAFGNVYAYPGAPRTVQVGISYTL HHCCCCEEEEEEEHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEEECC >Mature Secondary Structure MRRTLLSICVLQTLSPLAWAEPSDSTVSALELEATDVVGTADYERADGPVQGYRATRSAS CCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECEEEECCCCCCCCCCCCCHHHHCCCC ATRTDTSIHETPQSISVVTKDAVEDIGATRLQDALDYAGGVGRANNFGGQGLTTFTVRGF CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC TTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATMLYGRGDPGGTFNVVSKQPLPERT CCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCHHH VTLGSQLNDQGMRRGTLDASGPLDEEGRLAYRLNVVGEGGDTFRDHVETERYGVTPVLTW HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEE QASDDTRVIFEGDFMRNNHPLDRGATRYPRQIGTASRDTFFGEPDAGKLHNDNNMAQLRF ECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEH EHVLNEDWTLGGGFQWLDGTLQGNAIEANGIAADGRTLGRNFNYRKLEWTDKDTQLNLTG HHHCCCCCEECCCCEEECCEECCCEEECCCEECCCHHHCCCCCEEEEEECCCCCEEEEEE HFSTGGLQHTLLTGIEYEDYDYQSIIQRSSGAVSAYPIDIFNPVYGQPRPALTRTPTHDK ECCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCH ENLKTYAAFVQDQVALTDRLKVLAGARFERFEHDYETYVPGGKNWQASDNAVTPRVGVTY HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEE DLTDTLAIYADTARSFKPNTGASRQGGGFEPEKGKSWEMGVKWEALDHQLSVDAAIYQIE ECCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCEEEEEEE KRNVLTTDPVDSTFSVAAGEVRSRGFDLNVAGNLTPEWRVIGGYAYVDAEVTKDNVIRSG CCCEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEEEECCCCHHHHCC TRLMNIPKNSFSLLNVYEFQDGALSGLGLGTGVKYVDERAGQTANTAFSMGSYTVVDLLS CEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHH YYKVNDKLRLNLDLKNLFDRDYDEGAFGNVYAYPGAPRTVQVGISYTL HHCCCCEEEEEEEHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]