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The map label for this gene is yafS [H]

Identifier: 77458412

GI number: 77458412

Start: 2469243

End: 2470001

Strand: Direct

Name: yafS [H]

Synonym: Pfl01_2185

Alternate gene names: 77458412

Gene position: 2469243-2470001 (Clockwise)

Preceding gene: 77458403

Following gene: 77458413

Centisome position: 38.35

GC content: 66.27

Gene sequence:

>759_bases
ATGATCGATAAAGCGTTCGCTCAGGCCGATCCTGACTGGCTCGCGCTGATCGGTGCAGCCCGTGAATGGCTGTCCGGCCC
CCTCGGGCAATTTCTGCTGGACGAAGAACGGCGCATGCTCGAAGACGAGCTGGGCCGGTTCTTCGGCGGCTATCTGGTGC
ACTACGGCCCGTCCGCCGAAACACCGCCGTCGGCGCCGCAGGTGCAGCGCAACGTGCGGCTCGGTGCGCCGTTGCCGGGC
GTGGAAATCGTCTGCGAAGAACAAGCCTGGCCGTTGAGCGAGCACGCCGCCGATGTGGTGGTGTTGCAGCACGGCCTGGA
TTTCTGCCTGTCGCCCCACGGCTTGCTGCGCGAAGCGGCCAGCAGCGTGCGCCCCGGCGGGCATCTGCTGATCGTTGGCA
TCAACCCCTGGAGCACCTGGGGGCTGCGCCACGTGTTCGCCCATGACGCCTTGCATCAGGCGCGCTGCATCTCGCCATCG
CGGGTGGCGGACTGGCTCAATCTGCTGGGCTTCGCGCTGGAGAAACGCCGCTTCGGGTGCTATCGTCCGCCGCTCGCTTC
ACCCAAGTGGCAGGCCCGTCTGGCCGGTTGGGAGCGCAAGGCCGGTGACTGGCAATTGTCCGGCGGCGGTTTCTATTTAC
TGGTCGCACGCAAGATTGTGGTCGGCCTGCGTCCGGTGCGTCAGGAACGCCGCGAGCCGATGGGCAAGCTGATTCCGCTG
CCGATGGCCAAGGTCAACCGCCGACGCATCGAACCGTAA

Upstream 100 bases:

>100_bases
TCGGTGAAGGCGGGCAGGGCACTGATCTGTATCATCGTCGAATTCGCCAAGCGGGTAACATTGGCGCATCTTAGAGGTTC
CTGGCGTGTTGGAGAATGCA

Downstream 100 bases:

>100_bases
ACCTTCTTTTATTCATGGCCGGGTATATCCCGGCCTTGGCCATCGTCGATCCGTGATCGGCGAGGCCACGCATTTTTTCT
GGATAGACTGGCATGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIDKAFAQADPDWLALIGAAREWLSGPLGQFLLDEERRMLEDELGRFFGGYLVHYGPSAETPPSAPQVQRNVRLGAPLPG
VEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAASSVRPGGHLLIVGINPWSTWGLRHVFAHDALHQARCISPS
RVADWLNLLGFALEKRRFGCYRPPLASPKWQARLAGWERKAGDWQLSGGGFYLLVARKIVVGLRPVRQERREPMGKLIPL
PMAKVNRRRIEP

Sequences:

>Translated_252_residues
MIDKAFAQADPDWLALIGAAREWLSGPLGQFLLDEERRMLEDELGRFFGGYLVHYGPSAETPPSAPQVQRNVRLGAPLPG
VEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAASSVRPGGHLLIVGINPWSTWGLRHVFAHDALHQARCISPS
RVADWLNLLGFALEKRRFGCYRPPLASPKWQARLAGWERKAGDWQLSGGGFYLLVARKIVVGLRPVRQERREPMGKLIPL
PMAKVNRRRIEP
>Mature_252_residues
MIDKAFAQADPDWLALIGAAREWLSGPLGQFLLDEERRMLEDELGRFFGGYLVHYGPSAETPPSAPQVQRNVRLGAPLPG
VEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAASSVRPGGHLLIVGINPWSTWGLRHVFAHDALHQARCISPS
RVADWLNLLGFALEKRRFGCYRPPLASPKWQARLAGWERKAGDWQLSGGGFYLLVARKIVVGLRPVRQERREPMGKLIPL
PMAKVNRRRIEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=222, Percent_Identity=29.2792792792793, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28177; Mature: 28177

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKAFAQADPDWLALIGAAREWLSGPLGQFLLDEERRMLEDELGRFFGGYLVHYGPSAE
CCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
TPPSAPQVQRNVRLGAPLPGVEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAA
CCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHH
SSVRPGGHLLIVGINPWSTWGLRHVFAHDALHQARCISPSRVADWLNLLGFALEKRRFGC
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
YRPPLASPKWQARLAGWERKAGDWQLSGGGFYLLVARKIVVGLRPVRQERREPMGKLIPL
CCCCCCCCCHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHCCHHHHHHHHCHHHCCCCC
PMAKVNRRRIEP
CHHHHHHHCCCC
>Mature Secondary Structure
MIDKAFAQADPDWLALIGAAREWLSGPLGQFLLDEERRMLEDELGRFFGGYLVHYGPSAE
CCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
TPPSAPQVQRNVRLGAPLPGVEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAA
CCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHH
SSVRPGGHLLIVGINPWSTWGLRHVFAHDALHQARCISPSRVADWLNLLGFALEKRRFGC
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
YRPPLASPKWQARLAGWERKAGDWQLSGGGFYLLVARKIVVGLRPVRQERREPMGKLIPL
CCCCCCCCCHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHCCHHHHHHHHCHHHCCCCC
PMAKVNRRRIEP
CHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]