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The map label for this gene is silC [H]

Identifier: 77458366

GI number: 77458366

Start: 2422163

End: 2423716

Strand: Reverse

Name: silC [H]

Synonym: Pfl01_2139

Alternate gene names: 77458366

Gene position: 2423716-2422163 (Counterclockwise)

Preceding gene: 77458369

Following gene: 77458365

Centisome position: 37.64

GC content: 65.77

Gene sequence:

>1554_bases
ATGCCTGAAACGCCAGCCCTGCTGATCCGTCCCGGCCACCTGCTGTTGCTCGGTGCGCTGAGCCTTGGCGGCTGCCTGCG
GCTGGGCCCGGATTTCCAGCCGCCGGCGGAGGACTGGAGCAAGCAATGGCAAAGTCCGGCACTGGAGCAGGCCAGCGAAC
GCGGCACAGTGCCGGACCTGCGCCAGTGGTGGCAGGTGTTTGCCGATCCAGTGCTCGACCGCTTGATCAGCGACGCCGAA
GCCCGCAACAGCAGCCTGAAGATCGCCGGCCTGCGGGTCCTCGAAGCCCGCGCGCAACTGGGCATCGCCGACAGCGGTCG
CTACCCGCAACTGCAACAGGCCAGCGCCGACAGCCTGTACATCGACCGCCACCAGTCCGGCGGCACCAACCCGCAGGACT
TGCACTTCTGGCAGCACAGCGCCGCGTTCGATGTCGGCTGGGAACTGGATTTCTGGGGTCGCTTCAGCCGCGCCATCGAA
TCCGCCGACGCCAGCTACTTCGCCGCCCAGGCCAACTACGAAGACGCCCTCGTTCTATTACGCGCCCAAGTGGCCGACAC
CTACTTTGCCCTGCGCACCACCGAAGCCCGGCTGCGGGTCGCCCGGGAAAACGCCGCCCAGCAAAAACGCAATTTCGAAA
TCACCGAAAAACTCTTTCGCAGCGGCCAGACCGCCGAACTCGACCTGCAACAGGCCAGGACCCAATACCTCGGCACCCTG
AGCAGCATTCCGGCGTTCGAAGATCAATTGCTGCGTACCCGCAACGCGCTGGCGGTGCTGGTCGGCCAGCCGCCCGGTGG
CGCGGCGTTTCTGGCGGAACAACCGGGGCTGATTCCACTGGTGGATCGCGCGGTGTTGCAGGATGTCCCGGCCAACCTGT
TGCTGCGCCGTCCCGATGTGCGCGCGGCGGAGCTGAACGTGGCCGCGCAATCGGCGCTGGTCGGCGTGGCGGAAACCGAC
CTTTATCCCTCGCTGACCTTGCTCGGCAGCATCGTCTGGTCCAGCGACACCCTCGGCGCCACTCCGCGCAGCCTCGACCT
GATCGGTGGCCCGAGCCTGCGCTGGAACCTGTTCGACTACGGCCGCATCCACAACAACATCCGCGTGCAGGATGCGCGGT
TGCAGCAACTGATCGAAGCCTATCGCGACAAAGTCCGCCAGGCTGCCCGCGAGGCCGACGACGCTGCCAGCGGCCTGACC
AAAGCGCTGGAACGCGAACGCATTCTCGGCGAGGCCGAAGGCGCGGCGCGACGTTCGCTGGTGCTGGCCAACACTCAATA
TCGCGAAGGCTATTCAGACTTTCAGCGGGTGCTCGATGCCCAGCGTGCGTTGCTGGAGCTACAGGACAACTATCTGGTCA
GCCGCAGCAACGCCGTGAGCAATCTGATCGCTTTGTACCGCGCCGTCGGTGGTGGCTGGCAAAGCGCCGGACCGCAGATT
GATTCAGCGACCCGACAGCAGATGCAGCAACGCACCGACTGGGGCGATCTGCTGAGCGCCCCGCCGCCCCGACCGACCTA
TCCGATTCCCTCGCAGGTAGACCGCCATGAGTGA

Upstream 100 bases:

>100_bases
CGGTGGCGTTCGCCTGAAAAAGCGTAGCAGCTGATTGCTTCCAACAACCCGCAATCTGCGGTCTATGCTCCAGTGACATT
TCCCGCTGGGGTCGCCCGGT

Downstream 100 bases:

>100_bases
TGAAGCGCCGCCGGATCCGGCGAAAAAAGGCATCCGCTGGGTGCTGCTGGTGATTGTGCTGAGCCTGGTCTGGTATCTGC
TGGCCGACCGTTTTACGCCC

Product: RND efflux system outer membrane lipoprotein NodT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MPETPALLIRPGHLLLLGALSLGGCLRLGPDFQPPAEDWSKQWQSPALEQASERGTVPDLRQWWQVFADPVLDRLISDAE
ARNSSLKIAGLRVLEARAQLGIADSGRYPQLQQASADSLYIDRHQSGGTNPQDLHFWQHSAAFDVGWELDFWGRFSRAIE
SADASYFAAQANYEDALVLLRAQVADTYFALRTTEARLRVARENAAQQKRNFEITEKLFRSGQTAELDLQQARTQYLGTL
SSIPAFEDQLLRTRNALAVLVGQPPGGAAFLAEQPGLIPLVDRAVLQDVPANLLLRRPDVRAAELNVAAQSALVGVAETD
LYPSLTLLGSIVWSSDTLGATPRSLDLIGGPSLRWNLFDYGRIHNNIRVQDARLQQLIEAYRDKVRQAAREADDAASGLT
KALERERILGEAEGAARRSLVLANTQYREGYSDFQRVLDAQRALLELQDNYLVSRSNAVSNLIALYRAVGGGWQSAGPQI
DSATRQQMQQRTDWGDLLSAPPPRPTYPIPSQVDRHE

Sequences:

>Translated_517_residues
MPETPALLIRPGHLLLLGALSLGGCLRLGPDFQPPAEDWSKQWQSPALEQASERGTVPDLRQWWQVFADPVLDRLISDAE
ARNSSLKIAGLRVLEARAQLGIADSGRYPQLQQASADSLYIDRHQSGGTNPQDLHFWQHSAAFDVGWELDFWGRFSRAIE
SADASYFAAQANYEDALVLLRAQVADTYFALRTTEARLRVARENAAQQKRNFEITEKLFRSGQTAELDLQQARTQYLGTL
SSIPAFEDQLLRTRNALAVLVGQPPGGAAFLAEQPGLIPLVDRAVLQDVPANLLLRRPDVRAAELNVAAQSALVGVAETD
LYPSLTLLGSIVWSSDTLGATPRSLDLIGGPSLRWNLFDYGRIHNNIRVQDARLQQLIEAYRDKVRQAAREADDAASGLT
KALERERILGEAEGAARRSLVLANTQYREGYSDFQRVLDAQRALLELQDNYLVSRSNAVSNLIALYRAVGGGWQSAGPQI
DSATRQQMQQRTDWGDLLSAPPPRPTYPIPSQVDRHE
>Mature_516_residues
PETPALLIRPGHLLLLGALSLGGCLRLGPDFQPPAEDWSKQWQSPALEQASERGTVPDLRQWWQVFADPVLDRLISDAEA
RNSSLKIAGLRVLEARAQLGIADSGRYPQLQQASADSLYIDRHQSGGTNPQDLHFWQHSAAFDVGWELDFWGRFSRAIES
ADASYFAAQANYEDALVLLRAQVADTYFALRTTEARLRVARENAAQQKRNFEITEKLFRSGQTAELDLQQARTQYLGTLS
SIPAFEDQLLRTRNALAVLVGQPPGGAAFLAEQPGLIPLVDRAVLQDVPANLLLRRPDVRAAELNVAAQSALVGVAETDL
YPSLTLLGSIVWSSDTLGATPRSLDLIGGPSLRWNLFDYGRIHNNIRVQDARLQQLIEAYRDKVRQAAREADDAASGLTK
ALERERILGEAEGAARRSLVLANTQYREGYSDFQRVLDAQRALLELQDNYLVSRSNAVSNLIALYRAVGGGWQSAGPQID
SATRQQMQQRTDWGDLLSAPPPRPTYPIPSQVDRHE

Specific function: Component of the sil cation-efflux system that confers resistance to silver. May be part of a three-component cation/proton antiporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=489, Percent_Identity=29.6523517382413, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI2367348, Length=437, Percent_Identity=26.5446224256293, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 57216; Mature: 57085

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETPALLIRPGHLLLLGALSLGGCLRLGPDFQPPAEDWSKQWQSPALEQASERGTVPDL
CCCCCEEEEECCCEEEEHHHHHCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHH
RQWWQVFADPVLDRLISDAEARNSSLKIAGLRVLEARAQLGIADSGRYPQLQQASADSLY
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEE
IDRHQSGGTNPQDLHFWQHSAAFDVGWELDFWGRFSRAIESADASYFAAQANYEDALVLL
EECCCCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCHHEEECCCCCHHHHHH
RAQVADTYFALRTTEARLRVARENAAQQKRNFEITEKLFRSGQTAELDLQQARTQYLGTL
HHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SSIPAFEDQLLRTRNALAVLVGQPPGGAAFLAEQPGLIPLVDRAVLQDVPANLLLRRPDV
HCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHCCHHHEEECCCC
RAAELNVAAQSALVGVAETDLYPSLTLLGSIVWSSDTLGATPRSLDLIGGPSLRWNLFDY
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCHH
GRIHNNIRVQDARLQQLIEAYRDKVRQAAREADDAASGLTKALERERILGEAEGAARRSL
HHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEE
VLANTQYREGYSDFQRVLDAQRALLELQDNYLVSRSNAVSNLIALYRAVGGGWQSAGPQI
EEECCHHHCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCC
DSATRQQMQQRTDWGDLLSAPPPRPTYPIPSQVDRHE
CHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PETPALLIRPGHLLLLGALSLGGCLRLGPDFQPPAEDWSKQWQSPALEQASERGTVPDL
CCCCEEEEECCCEEEEHHHHHCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHH
RQWWQVFADPVLDRLISDAEARNSSLKIAGLRVLEARAQLGIADSGRYPQLQQASADSLY
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEE
IDRHQSGGTNPQDLHFWQHSAAFDVGWELDFWGRFSRAIESADASYFAAQANYEDALVLL
EECCCCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCHHEEECCCCCHHHHHH
RAQVADTYFALRTTEARLRVARENAAQQKRNFEITEKLFRSGQTAELDLQQARTQYLGTL
HHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SSIPAFEDQLLRTRNALAVLVGQPPGGAAFLAEQPGLIPLVDRAVLQDVPANLLLRRPDV
HCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHCCHHHEEECCCC
RAAELNVAAQSALVGVAETDLYPSLTLLGSIVWSSDTLGATPRSLDLIGGPSLRWNLFDY
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCHH
GRIHNNIRVQDARLQQLIEAYRDKVRQAAREADDAASGLTKALERERILGEAEGAARRSL
HHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEE
VLANTQYREGYSDFQRVLDAQRALLELQDNYLVSRSNAVSNLIALYRAVGGGWQSAGPQI
EEECCHHHCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCC
DSATRQQMQQRTDWGDLLSAPPPRPTYPIPSQVDRHE
CHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9930866 [H]