| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458353
Identifier: 77458353
GI number: 77458353
Start: 2413006
End: 2413752
Strand: Reverse
Name: 77458353
Synonym: Pfl01_2126
Alternate gene names: NA
Gene position: 2413752-2413006 (Counterclockwise)
Preceding gene: 77458354
Following gene: 77458348
Centisome position: 37.49
GC content: 44.18
Gene sequence:
>747_bases ATGCAGCTGACCAAAAACAATTCCGATTCAAACATCATGAATACTATTTCCTTAAACCTGGCAACCTCCATACTGACTGC GATAGTCGCAGCATCCCTGGGCGCGTATTACACTGCGTCAGAATCAGCGAAAGCCAACGAACGATCTGATCGGCAACGGT TTGTAGATGGTGCTCAGCAAACTGCACAAGAAACGACACAACTTCTTATAAAAAGCTATGAAGAGCTTCAACGTTTTAAT GATGCGGCGAGAAAATCCGAGAAAGGCTGGGATGATTTCCTGGCCTCCGAGGCCTTCACAAAATTCTCGACCTTTGAACG AGACTGGCACAAAAACCTTATAGTCCTTTACTTCAAAGTTAGTCGGTATTATGGAAAAGCAACAGCACAACAACTTTTAT TGCTTGCAAATTTCGAACTTAACCCAACTGACAGCCAATCAAAAGAGAGTCGCGGTCAAGAAAGCAGCTTGATGCTAGCC TGGGGCGAAGCCTTTAGAGCAAATGCGTCAACCGTTGTACTACAAGGGGAAGCAACCAAGTTCTTCAATAACAAAAGCAG CGTATTTGATAATCTTGGCTCAGTCATGAAAGAAACTAACGAGGCAAAAACAAACTCACAGAGAGCGACTGAAATCTATG GGCAGCACGTTATCAACTTTCTTGGAATACTCGACTCAAACCTGACGCAGTTAGGAGCTCTTGAAGTCAAAGTAGTCTCC ACTCCCTCCACCACAGTCGAAAAATAG
Upstream 100 bases:
>100_bases GTGATTGAACGACGCAGGGTAGCGATCACGTAATCAACTACGAAACTCATCATTTAGATAGTTTAAAACCCAAACTTTCC CGCATAGATCCAAACCCAAT
Downstream 100 bases:
>100_bases CGCTCACAACTGGAAGGCGTTTCACTCGAGAAACGCCTTCCATTAAAAATACTGAATCAACTACGGCTGCACGCTAAAAA TTCGCCGGCGTATTCGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MQLTKNNSDSNIMNTISLNLATSILTAIVAASLGAYYTASESAKANERSDRQRFVDGAQQTAQETTQLLIKSYEELQRFN DAARKSEKGWDDFLASEAFTKFSTFERDWHKNLIVLYFKVSRYYGKATAQQLLLLANFELNPTDSQSKESRGQESSLMLA WGEAFRANASTVVLQGEATKFFNNKSSVFDNLGSVMKETNEAKTNSQRATEIYGQHVINFLGILDSNLTQLGALEVKVVS TPSTTVEK
Sequences:
>Translated_248_residues MQLTKNNSDSNIMNTISLNLATSILTAIVAASLGAYYTASESAKANERSDRQRFVDGAQQTAQETTQLLIKSYEELQRFN DAARKSEKGWDDFLASEAFTKFSTFERDWHKNLIVLYFKVSRYYGKATAQQLLLLANFELNPTDSQSKESRGQESSLMLA WGEAFRANASTVVLQGEATKFFNNKSSVFDNLGSVMKETNEAKTNSQRATEIYGQHVINFLGILDSNLTQLGALEVKVVS TPSTTVEK >Mature_248_residues MQLTKNNSDSNIMNTISLNLATSILTAIVAASLGAYYTASESAKANERSDRQRFVDGAQQTAQETTQLLIKSYEELQRFN DAARKSEKGWDDFLASEAFTKFSTFERDWHKNLIVLYFKVSRYYGKATAQQLLLLANFELNPTDSQSKESRGQESSLMLA WGEAFRANASTVVLQGEATKFFNNKSSVFDNLGSVMKETNEAKTNSQRATEIYGQHVINFLGILDSNLTQLGALEVKVVS TPSTTVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27617; Mature: 27617
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTKNNSDSNIMNTISLNLATSILTAIVAASLGAYYTASESAKANERSDRQRFVDGAQQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHH TAQETTQLLIKSYEELQRFNDAARKSEKGWDDFLASEAFTKFSTFERDWHKNLIVLYFKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH SRYYGKATAQQLLLLANFELNPTDSQSKESRGQESSLMLAWGEAFRANASTVVLQGEATK HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEECHHHHCCCCEEEEECCHHH FFNNKSSVFDNLGSVMKETNEAKTNSQRATEIYGQHVINFLGILDSNLTQLGALEVKVVS HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEE TPSTTVEK CCCCCCCC >Mature Secondary Structure MQLTKNNSDSNIMNTISLNLATSILTAIVAASLGAYYTASESAKANERSDRQRFVDGAQQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHH TAQETTQLLIKSYEELQRFNDAARKSEKGWDDFLASEAFTKFSTFERDWHKNLIVLYFKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH SRYYGKATAQQLLLLANFELNPTDSQSKESRGQESSLMLAWGEAFRANASTVVLQGEATK HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEECHHHHCCCCEEEEECCHHH FFNNKSSVFDNLGSVMKETNEAKTNSQRATEIYGQHVINFLGILDSNLTQLGALEVKVVS HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEE TPSTTVEK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA