Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77458354

Identifier: 77458354

GI number: 77458354

Start: 2413820

End: 2414104

Strand: Reverse

Name: 77458354

Synonym: Pfl01_2127

Alternate gene names: NA

Gene position: 2414104-2413820 (Counterclockwise)

Preceding gene: 77458362

Following gene: 77458353

Centisome position: 37.5

GC content: 56.49

Gene sequence:

>285_bases
ATGACAAGTAAGTCACCGCAGTGCAACTACGCCCCAATGTCCCACCCCGCCACTGACCACCCCGTTCTGTTCATCGATGC
CGACGCGCCACTGAGTGACCTCCACGCCTGCGCCAGCGAACGCTTGAGCGCAGTGCTCAAATACCTCGACCTCATGGCCT
GCATCCACCTCCCAGACCACGCCGAACAAGACATCAACATAGTTACCACTACAGCCAGAATCCTGGTTCAGGACGTGCGC
GATGTATTTAGAGTGATTGAACGACGCAGGGTAGCGATCACGTAA

Upstream 100 bases:

>100_bases
GGGTCTTAGCTCCTCGGTCTGCGAACCCGCGCATAACTGCCACCCAACTCGTTTCGCAGCGAGCAGTGATTATTAATTTC
TGAGCTAAGGATTTTTACCC

Downstream 100 bases:

>100_bases
TCAACTACGAAACTCATCATTTAGATAGTTTAAAACCCAAACTTTCCCGCATAGATCCAAACCCAATATGCAGCTGACCA
AAAACAATTCCGATTCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTSKSPQCNYAPMSHPATDHPVLFIDADAPLSDLHACASERLSAVLKYLDLMACIHLPDHAEQDINIVTTTARILVQDVR
DVFRVIERRRVAIT

Sequences:

>Translated_94_residues
MTSKSPQCNYAPMSHPATDHPVLFIDADAPLSDLHACASERLSAVLKYLDLMACIHLPDHAEQDINIVTTTARILVQDVR
DVFRVIERRRVAIT
>Mature_93_residues
TSKSPQCNYAPMSHPATDHPVLFIDADAPLSDLHACASERLSAVLKYLDLMACIHLPDHAEQDINIVTTTARILVQDVRD
VFRVIERRRVAIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10510; Mature: 10379

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKSPQCNYAPMSHPATDHPVLFIDADAPLSDLHACASERLSAVLKYLDLMACIHLPDH
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AEQDINIVTTTARILVQDVRDVFRVIERRRVAIT
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSKSPQCNYAPMSHPATDHPVLFIDADAPLSDLHACASERLSAVLKYLDLMACIHLPDH
CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AEQDINIVTTTARILVQDVRDVFRVIERRRVAIT
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA