| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458322
Identifier: 77458322
GI number: 77458322
Start: 2379982
End: 2381358
Strand: Direct
Name: 77458322
Synonym: Pfl01_2095
Alternate gene names: NA
Gene position: 2379982-2381358 (Clockwise)
Preceding gene: 77458321
Following gene: 77458323
Centisome position: 36.97
GC content: 61.15
Gene sequence:
>1377_bases ATGACTGTCCTGACTCACCTGCAAGCTGCCCCCGCCCCATCGCGTCCGCTCGATTCTCTGGATGGGTTGCGGCGTATCCA TGAAGCACTTTTAGCCGACGAACATCCTCAGCCGCTGGCGCGCGCCTTTCTGGAAGATCAACTGCTGCAAGCCGCGCAGT TGAAGGATGAGCTGCCATCGGACCCCGCGCAGTGGCATGCCTGGGTGGCTGAGCACTGTGCCGATGTCGCCCGGCAATAC GCCGACTACCTGCAACAACGCAAGGCTGGAGGCGCACGGCAGTTCTTCAGTTGCAAGGCTCATGCGCTGTATTTCCTGCA AGCGGTGGCGCCGACCAAGCTGGTTGATGGCGCCTGGCTCTACGGCTTGCTCGGACAGTGGCGCGATCCGCGCTTCAGTA GCCTGATCAGCACTTATCTGGAAGAACTGGGCGAGGGCAATCCGGCGCAGAACCACGTCGTGATCTACCGCCAGCTGCTC GCCGAACAGGGCCTCGAGCCCAGCAGTCCGCTGCCCGACGAACGCTATCTGCAAGGCGCGCTGCAATTGGCCCTGGGTGC CGGCGGCATGGATTTTCTCCCGGAGGTGATCGGTTACAACCTTGGTTACGAACAGCTGCCCCTGCACCTGTTGATCAGCA GTTACGAGCTCAGTGAGTTGGGGATCGATCCTTACTACTTCACTCTGCACGTGACCATCGACAACGCCAGCACCGGCCAT GCGCAAAAAGCCGTTCAGGCCGTTCTCGATCTGCTGCCTCTGGAAGCCAATCGCAGCGATTTCCTGCGCCGGGTCTCGCT GGGTTATCGGCTCAATGATCTGGGGCAGGGCACCCGCGCAATCATCGAGGGGTTCGATCTGGAGCGCGAATTGTTGGCGA TGCTTGAACGCAAGTGTCCGTTCGCTCAACACATGCACTCCGACTATTGCCGCTTCGAAGGAAAGACCGTCAATCAATGG CTGGCCGACCCGCAGCAGTTGCCCGGCTTCCTGCAAGCCTTGCAGGACAAGGGCTGGATCAAGCGCAACGAAGATCCGCA GGGCAGCCGCTTCTGGCAATTGATCCATGGCGATGGTGCGGCGATGTTCGGCGTGTTCAGCGCCTATGAAAAACAACTGG TGCATGACTGGATTGCCGGTGACTGGATTTCTGAGGACAAACCCGTCGCGTTCCGCCGCCGCCCCTCGGTCCCCGCGCCG ATCGAGGTGCCCGAACAGGACACCGATGTGCAGCGCCTCAGTGCGGCGCTGCAAGGGCAGGACGCTCACACCCAAATCGC AACGTTGATCCCGTGGCTCGCACCGTCGCGCCATGCACATCCGGCCGGGCTGCTCGCCACTCGCCGATTCATCCAACTCA AATCCGGCCTGCGTTAA
Upstream 100 bases:
>100_bases GGGCAATTTTCAAGCCGATTGAATTTTTGACGCGCCAAGCCTCTCTGCTTCATTAGAGGCGAGTGACTGAGCGTCCTGCC AATCGATCGAGAATATTGCC
Downstream 100 bases:
>100_bases GGAATTCATCAATGAATCAGGAAGAACAACTGTCCGCCAACGATCTGGTGCTGGTGCAACTGGGGCGGCGCCTGCAGGCC GACGGCTATCGTTTCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTVLTHLQAAPAPSRPLDSLDGLRRIHEALLADEHPQPLARAFLEDQLLQAAQLKDELPSDPAQWHAWVAEHCADVARQY ADYLQQRKAGGARQFFSCKAHALYFLQAVAPTKLVDGAWLYGLLGQWRDPRFSSLISTYLEELGEGNPAQNHVVIYRQLL AEQGLEPSSPLPDERYLQGALQLALGAGGMDFLPEVIGYNLGYEQLPLHLLISSYELSELGIDPYYFTLHVTIDNASTGH AQKAVQAVLDLLPLEANRSDFLRRVSLGYRLNDLGQGTRAIIEGFDLERELLAMLERKCPFAQHMHSDYCRFEGKTVNQW LADPQQLPGFLQALQDKGWIKRNEDPQGSRFWQLIHGDGAAMFGVFSAYEKQLVHDWIAGDWISEDKPVAFRRRPSVPAP IEVPEQDTDVQRLSAALQGQDAHTQIATLIPWLAPSRHAHPAGLLATRRFIQLKSGLR
Sequences:
>Translated_458_residues MTVLTHLQAAPAPSRPLDSLDGLRRIHEALLADEHPQPLARAFLEDQLLQAAQLKDELPSDPAQWHAWVAEHCADVARQY ADYLQQRKAGGARQFFSCKAHALYFLQAVAPTKLVDGAWLYGLLGQWRDPRFSSLISTYLEELGEGNPAQNHVVIYRQLL AEQGLEPSSPLPDERYLQGALQLALGAGGMDFLPEVIGYNLGYEQLPLHLLISSYELSELGIDPYYFTLHVTIDNASTGH AQKAVQAVLDLLPLEANRSDFLRRVSLGYRLNDLGQGTRAIIEGFDLERELLAMLERKCPFAQHMHSDYCRFEGKTVNQW LADPQQLPGFLQALQDKGWIKRNEDPQGSRFWQLIHGDGAAMFGVFSAYEKQLVHDWIAGDWISEDKPVAFRRRPSVPAP IEVPEQDTDVQRLSAALQGQDAHTQIATLIPWLAPSRHAHPAGLLATRRFIQLKSGLR >Mature_457_residues TVLTHLQAAPAPSRPLDSLDGLRRIHEALLADEHPQPLARAFLEDQLLQAAQLKDELPSDPAQWHAWVAEHCADVARQYA DYLQQRKAGGARQFFSCKAHALYFLQAVAPTKLVDGAWLYGLLGQWRDPRFSSLISTYLEELGEGNPAQNHVVIYRQLLA EQGLEPSSPLPDERYLQGALQLALGAGGMDFLPEVIGYNLGYEQLPLHLLISSYELSELGIDPYYFTLHVTIDNASTGHA QKAVQAVLDLLPLEANRSDFLRRVSLGYRLNDLGQGTRAIIEGFDLERELLAMLERKCPFAQHMHSDYCRFEGKTVNQWL ADPQQLPGFLQALQDKGWIKRNEDPQGSRFWQLIHGDGAAMFGVFSAYEKQLVHDWIAGDWISEDKPVAFRRRPSVPAPI EVPEQDTDVQRLSAALQGQDAHTQIATLIPWLAPSRHAHPAGLLATRRFIQLKSGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51378; Mature: 51247
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLTHLQAAPAPSRPLDSLDGLRRIHEALLADEHPQPLARAFLEDQLLQAAQLKDELPS CCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DPAQWHAWVAEHCADVARQYADYLQQRKAGGARQFFSCKAHALYFLQAVAPTKLVDGAWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH YGLLGQWRDPRFSSLISTYLEELGEGNPAQNHVVIYRQLLAEQGLEPSSPLPDERYLQGA HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LQLALGAGGMDFLPEVIGYNLGYEQLPLHLLISSYELSELGIDPYYFTLHVTIDNASTGH HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCH AQKAVQAVLDLLPLEANRSDFLRRVSLGYRLNDLGQGTRAIIEGFDLERELLAMLERKCP HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHCCC FAQHMHSDYCRFEGKTVNQWLADPQQLPGFLQALQDKGWIKRNEDPQGSRFWQLIHGDGA HHHHHHHHHHHCCCCCHHHHHCCHHHCHHHHHHHHHCCCCCCCCCCCCCCEEEEHCCCCH AMFGVFSAYEKQLVHDWIAGDWISEDKPVAFRRRPSVPAPIEVPEQDTDVQRLSAALQGQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC DAHTQIATLIPWLAPSRHAHPAGLLATRRFIQLKSGLR CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVLTHLQAAPAPSRPLDSLDGLRRIHEALLADEHPQPLARAFLEDQLLQAAQLKDELPS CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DPAQWHAWVAEHCADVARQYADYLQQRKAGGARQFFSCKAHALYFLQAVAPTKLVDGAWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH YGLLGQWRDPRFSSLISTYLEELGEGNPAQNHVVIYRQLLAEQGLEPSSPLPDERYLQGA HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LQLALGAGGMDFLPEVIGYNLGYEQLPLHLLISSYELSELGIDPYYFTLHVTIDNASTGH HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCH AQKAVQAVLDLLPLEANRSDFLRRVSLGYRLNDLGQGTRAIIEGFDLERELLAMLERKCP HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHCCC FAQHMHSDYCRFEGKTVNQWLADPQQLPGFLQALQDKGWIKRNEDPQGSRFWQLIHGDGA HHHHHHHHHHHCCCCCHHHHHCCHHHCHHHHHHHHHCCCCCCCCCCCCCCEEEEHCCCCH AMFGVFSAYEKQLVHDWIAGDWISEDKPVAFRRRPSVPAPIEVPEQDTDVQRLSAALQGQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC DAHTQIATLIPWLAPSRHAHPAGLLATRRFIQLKSGLR CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA