| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458292
Identifier: 77458292
GI number: 77458292
Start: 2351789
End: 2352901
Strand: Direct
Name: 77458292
Synonym: Pfl01_2065
Alternate gene names: NA
Gene position: 2351789-2352901 (Clockwise)
Preceding gene: 77458291
Following gene: 77458293
Centisome position: 36.53
GC content: 64.24
Gene sequence:
>1113_bases ATGCAACGCATCGACCATCTTCTGCCCTGGAGCCACCTGGGCAGCGAACGTTCTCTGAGCGTGTTCCGTTACGGCGCCGG CCCGCGCAAGGTCTACATCCAGGCCAGCCTGCACGCCGATGAACTGCCAGGCATGCGCACCGCGTGGGAACTGAAAAAGC GCCTGGCCGAACTGGAAAGCAACGGCCAGTTGCAAGGCGTGATCGAACTGGTGCCGGTGGCCAACCCGATCGGCCTCGAT CAGCATCTGCAAGGCAGCCACATGGGCCGTTTCGAACTGGGCAGCGGCAAGAACTTCAACCGCTCCTTCGTCGAACTCAG TGCGCCGGTGGCCGAGCGCATCGGGAGTCAGTTGGGCGGTGATGCCCAAGCCAACATCGCGCTGATCCGCCAGACAATGG GCCAGATACTCGACGAACTGCCGGACCCGGCCTCGCAACTGGAAGCACTGCACCGTCTGTTGCTGCGCCACGCCTGTGAG GCCGACATCACCCTCGATCTGCATTGCGACTTCGACGCCGCAATTCATATTTACGCACTGCCGCAGCACTGGCCACAGTG GCAGTCCCTCGCCGCACGCCTGAAGGCTGGCGTGGCGCTGTTGTGTGAAGACTCCGGCGGCAGTTCGTTCGATGAATCCT GCTCCTCGCCGTGGTTGCGCCTGGCCCGGGCCTTCCCGAACGCGGCGATTCCACCGGCCAACCTCGCCACCACCCTGGAG CTGGGCAGCATGGGCGACACCCGCGTCGATCAGGCTCAGGCCAACTGCGAGGCGATCCTGGGCTTTCTCGCCGAACAGGG CTTCATCAGCGGTGAATGGCCAACAGCGCCGGAAGAATGCTGCGAAGGCATGCCGTTCGAAGGCACCGAATACCTGTTCG CCCCGCATCACGGCGTGGTGAGTTTCCTGCGTGATGCCGGCGAGTGGGTCGAGCGCGGCGATGCGCTGTTCGAAGTGGTC GATCCGTTGAACGACCGCGTGACCACCGTGCGCGCGGGCACCAGCGGCGTGTTGTTCGCCATCGATCGCGGACGCTACAC CCAGCCGGGCATCTGGCAGGCGAAGGTGGCGGGGCGTGAGCCGATTCGAGTCGGGAAACTGATCAACGACTGA
Upstream 100 bases:
>100_bases GACGCGGTGGCCACTTTTTTTTCGCCCGTGATTTATCCTGTCAGCACATTTTCAATGCGGTCACTGGGTAGCAGCGACCA CAGAATTTCCGGAGTTCCCC
Downstream 100 bases:
>100_bases CACCCTATCCTCCGGATCACAGTGTTAGGCTCTCCCCCGAACCCTGCACTGTGTGAAGGAAGGCTTATGTTGAAGGTGTT TGCGCTGTTGACGCTGCTGG
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Deacylase; Arginine Catabolism Protein; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein; Arginine/Ornithine Transport Operon(AotO) Protein
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MQRIDHLLPWSHLGSERSLSVFRYGAGPRKVYIQASLHADELPGMRTAWELKKRLAELESNGQLQGVIELVPVANPIGLD QHLQGSHMGRFELGSGKNFNRSFVELSAPVAERIGSQLGGDAQANIALIRQTMGQILDELPDPASQLEALHRLLLRHACE ADITLDLHCDFDAAIHIYALPQHWPQWQSLAARLKAGVALLCEDSGGSSFDESCSSPWLRLARAFPNAAIPPANLATTLE LGSMGDTRVDQAQANCEAILGFLAEQGFISGEWPTAPEECCEGMPFEGTEYLFAPHHGVVSFLRDAGEWVERGDALFEVV DPLNDRVTTVRAGTSGVLFAIDRGRYTQPGIWQAKVAGREPIRVGKLIND
Sequences:
>Translated_370_residues MQRIDHLLPWSHLGSERSLSVFRYGAGPRKVYIQASLHADELPGMRTAWELKKRLAELESNGQLQGVIELVPVANPIGLD QHLQGSHMGRFELGSGKNFNRSFVELSAPVAERIGSQLGGDAQANIALIRQTMGQILDELPDPASQLEALHRLLLRHACE ADITLDLHCDFDAAIHIYALPQHWPQWQSLAARLKAGVALLCEDSGGSSFDESCSSPWLRLARAFPNAAIPPANLATTLE LGSMGDTRVDQAQANCEAILGFLAEQGFISGEWPTAPEECCEGMPFEGTEYLFAPHHGVVSFLRDAGEWVERGDALFEVV DPLNDRVTTVRAGTSGVLFAIDRGRYTQPGIWQAKVAGREPIRVGKLIND >Mature_370_residues MQRIDHLLPWSHLGSERSLSVFRYGAGPRKVYIQASLHADELPGMRTAWELKKRLAELESNGQLQGVIELVPVANPIGLD QHLQGSHMGRFELGSGKNFNRSFVELSAPVAERIGSQLGGDAQANIALIRQTMGQILDELPDPASQLEALHRLLLRHACE ADITLDLHCDFDAAIHIYALPQHWPQWQSLAARLKAGVALLCEDSGGSSFDESCSSPWLRLARAFPNAAIPPANLATTLE LGSMGDTRVDQAQANCEAILGFLAEQGFISGEWPTAPEECCEGMPFEGTEYLFAPHHGVVSFLRDAGEWVERGDALFEVV DPLNDRVTTVRAGTSGVLFAIDRGRYTQPGIWQAKVAGREPIRVGKLIND
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40486; Mature: 40486
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRIDHLLPWSHLGSERSLSVFRYGAGPRKVYIQASLHADELPGMRTAWELKKRLAELES CCHHHHHCCHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHC NGQLQGVIELVPVANPIGLDQHLQGSHMGRFELGSGKNFNRSFVELSAPVAERIGSQLGG CCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHCCC DAQANIALIRQTMGQILDELPDPASQLEALHRLLLRHACEADITLDLHCDFDAAIHIYAL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEC PQHWPQWQSLAARLKAGVALLCEDSGGSSFDESCSSPWLRLARAFPNAAIPPANLATTLE CCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEE LGSMGDTRVDQAQANCEAILGFLAEQGFISGEWPTAPEECCEGMPFEGTEYLFAPHHGVV ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCHHHH SFLRDAGEWVERGDALFEVVDPLNDRVTTVRAGTSGVLFAIDRGRYTQPGIWQAKVAGRE HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCC PIRVGKLIND CCCCCCCCCC >Mature Secondary Structure MQRIDHLLPWSHLGSERSLSVFRYGAGPRKVYIQASLHADELPGMRTAWELKKRLAELES CCHHHHHCCHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHC NGQLQGVIELVPVANPIGLDQHLQGSHMGRFELGSGKNFNRSFVELSAPVAERIGSQLGG CCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHCCC DAQANIALIRQTMGQILDELPDPASQLEALHRLLLRHACEADITLDLHCDFDAAIHIYAL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEC PQHWPQWQSLAARLKAGVALLCEDSGGSSFDESCSSPWLRLARAFPNAAIPPANLATTLE CCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEE LGSMGDTRVDQAQANCEAILGFLAEQGFISGEWPTAPEECCEGMPFEGTEYLFAPHHGVV ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCHHHH SFLRDAGEWVERGDALFEVVDPLNDRVTTVRAGTSGVLFAIDRGRYTQPGIWQAKVAGRE HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCC PIRVGKLIND CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA