| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458293
Identifier: 77458293
GI number: 77458293
Start: 2352968
End: 2353684
Strand: Direct
Name: 77458293
Synonym: Pfl01_2066
Alternate gene names: NA
Gene position: 2352968-2353684 (Clockwise)
Preceding gene: 77458292
Following gene: 77458295
Centisome position: 36.55
GC content: 58.86
Gene sequence:
>717_bases ATGTTGAAGGTGTTTGCGCTGTTGACGCTGCTGGCGTCCACTGCCGTTCAGGCTCAGACCTCGCTGCAAAACGATCTGCC ACTCAACTACCTGGCTCAGGTGCACCCGGACGCCGAACAGCGTCCGCTGGTGATTTTCCTGCATGGCTATGGCAGCAACG AAGCAGACTTGATCGGTCTGAAATTTCAGCTGCCCAAGCAGTACAACTACCTGTCGGTGCAGGCACCGATGGCATTGGGC GAAGGACGTTATCAGTGGTTTCGCAAGAAAGGTGAAGGTGCCTACAACGGCGAGACTGATGATCTGAAGGCCAGCAGCCA GAAACTGCGGGCCTTTATCGCCGCAGCGGCGCAGAAATATCACGCGCAACCGGAGAAGGTGTACCTGATCGGTTTCAGTC AGGGCGCGATGATGACTTACGAGGTCGGGTTGCGGCAGCCTGCGGCGGTGGGGGGCATTGCGGCGTTGAGCGGGCGGGTA TTGCCGGTGCTCAAGAGCGAGCTGAAGTCAGAGCAACAGCATCCGCCGCTGGACATCTTCATCGGCCACGGCACGGCGGA TGACCGGGTGCCTTACAGCGGTGGCACCGAAGCCGATGCGTTGTTGCAGAAGCTGTCGTACAAACCGCAATTTCATGCCT ATCCCGGCGTCGGCCACAGCATCAGCACGGCCGAGCTTCGGGATTTGAACGACTGGTTGCAGCAACTCAACCCGTAA
Upstream 100 bases:
>100_bases GCCGATTCGAGTCGGGAAACTGATCAACGACTGACACCCTATCCTCCGGATCACAGTGTTAGGCTCTCCCCCGAACCCTG CACTGTGTGAAGGAAGGCTT
Downstream 100 bases:
>100_bases AGATCATTTTTCCTTGAGGATGGTTTTCACCAGCGCTTCGTGACCGCTCTTGTCGCTGGCCCGGGAAATCACCTGGACCA GCGCCATGCGCGTGCCGGAT
Product: phospholipase/carboxylesterase
Products: NA
Alternate protein names: Phospholipase/Carboxylesterase Family Protein; Carboxylesterase; Serine Esterase; Esterase; Phospholipase/Carboxylesterase Superfamily; Carboxylesterase Protein; Phospholipase/Carboxylesterase Superfamily Protein; Phospholipase / Carboxylesterase; COBF Protein
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MLKVFALLTLLASTAVQAQTSLQNDLPLNYLAQVHPDAEQRPLVIFLHGYGSNEADLIGLKFQLPKQYNYLSVQAPMALG EGRYQWFRKKGEGAYNGETDDLKASSQKLRAFIAAAAQKYHAQPEKVYLIGFSQGAMMTYEVGLRQPAAVGGIAALSGRV LPVLKSELKSEQQHPPLDIFIGHGTADDRVPYSGGTEADALLQKLSYKPQFHAYPGVGHSISTAELRDLNDWLQQLNP
Sequences:
>Translated_238_residues MLKVFALLTLLASTAVQAQTSLQNDLPLNYLAQVHPDAEQRPLVIFLHGYGSNEADLIGLKFQLPKQYNYLSVQAPMALG EGRYQWFRKKGEGAYNGETDDLKASSQKLRAFIAAAAQKYHAQPEKVYLIGFSQGAMMTYEVGLRQPAAVGGIAALSGRV LPVLKSELKSEQQHPPLDIFIGHGTADDRVPYSGGTEADALLQKLSYKPQFHAYPGVGHSISTAELRDLNDWLQQLNP >Mature_238_residues MLKVFALLTLLASTAVQAQTSLQNDLPLNYLAQVHPDAEQRPLVIFLHGYGSNEADLIGLKFQLPKQYNYLSVQAPMALG EGRYQWFRKKGEGAYNGETDDLKASSQKLRAFIAAAAQKYHAQPEKVYLIGFSQGAMMTYEVGLRQPAAVGGIAALSGRV LPVLKSELKSEQQHPPLDIFIGHGTADDRVPYSGGTEADALLQKLSYKPQFHAYPGVGHSISTAELRDLNDWLQQLNP
Specific function: Unknown
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17508057, Length=216, Percent_Identity=28.7037037037037, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26138; Mature: 26138
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVFALLTLLASTAVQAQTSLQNDLPLNYLAQVHPDAEQRPLVIFLHGYGSNEADLIGL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEE KFQLPKQYNYLSVQAPMALGEGRYQWFRKKGEGAYNGETDDLKASSQKLRAFIAAAAQKY EEECCCCCCEEEEECCHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HAQPEKVYLIGFSQGAMMTYEVGLRQPAAVGGIAALSGRVLPVLKSELKSEQQHPPLDIF CCCCCEEEEEEECCCCEEEEECCCCCCCHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEE IGHGTADDRVPYSGGTEADALLQKLSYKPQFHAYPGVGHSISTAELRDLNDWLQQLNP EECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKVFALLTLLASTAVQAQTSLQNDLPLNYLAQVHPDAEQRPLVIFLHGYGSNEADLIGL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEE KFQLPKQYNYLSVQAPMALGEGRYQWFRKKGEGAYNGETDDLKASSQKLRAFIAAAAQKY EEECCCCCCEEEEECCHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH HAQPEKVYLIGFSQGAMMTYEVGLRQPAAVGGIAALSGRVLPVLKSELKSEQQHPPLDIF CCCCCEEEEEEECCCCEEEEECCCCCCCHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEE IGHGTADDRVPYSGGTEADALLQKLSYKPQFHAYPGVGHSISTAELRDLNDWLQQLNP EECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA