Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458254

Identifier: 77458254

GI number: 77458254

Start: 2311467

End: 2313914

Strand: Direct

Name: 77458254

Synonym: Pfl01_2027

Alternate gene names: NA

Gene position: 2311467-2313914 (Clockwise)

Preceding gene: 77458253

Following gene: 77458255

Centisome position: 35.9

GC content: 65.24

Gene sequence:

>2448_bases
ATGGCGCTGCTCAGTCACTGGCGACGCCATCCGGTGCAGTTTTTCAGTGTGCTGACCGGGTTGTGGCTGGCCACCAGCCT
GTTGACCGGAGTCGAAGCCCTCAACAGTCAGGCGCGGGACAGTTACGCCCGGGCCAGCCAGTTGATCGGCGGCGAACCCC
AGGCCAGTCTGAGCACGCCGAACGGCGCGACGTTCCCGCAACAATGGTTCATCGACCTGCGGCGACAAGGCTGGCCGGTG
TCGCCGATGCTGCAAGGGCGCTTGATACTCAAGGGCCACGAAAACCAGCGCCTGCAATTGATGGGCATCGAGCCTGTGTC
GTTGCCCGGCGACAGCGCGGTGGCCGGGCAGGCGATGCCAATCGAGCGCATCGTCGAGTTCTTTAGCCCGCCGGGCAGCA
CCTGGATTTCTCCCGAGACGTTGCGTGCGCTGAACCTCGCCGAGGGCGCGACCCCGGCCACCGAAACCGGCCAGACGTTG
CCGCCGCTGCGAGCGCAAACCGACATGGCCCCCGGCGTGCTGCTGGTGGACATTGGCGTCGCTCAGCGCGTGCTCGAACA
GTCCGATCAACTGTCACGTCTGCTGTTGCCGAAGGATTTTCACGCCGACGTCCCGGCCGCGTTCAAGGGCCAGTTGCAGC
TCAAGAGCAGTGGCGAGGAAAACAACCTTGCGCGACTGACCGAAAGCTTCCACCTCAACCTCGATGCGCTCGGGTTTCTC
TCGTTCATCGTCGGCTTGTTCATTGTTCACGCGGCCATCGGTCTGGCGCTGGAACAGCGCCGGGGATTGCTGCGCACGTT
GAGGGCCTGCGGGGTCAGCGCGCGGATGCTGATCGCTTGCCTGATCGTCGAACTCGGCGCGCTGGCGTTGATCGGCGGGT
TGTTCGGCGTGGTCAGCGGTTACTGGCTGGCAAGCGTGCTGTTACCGGACGTCGCGGCCAGCCTGCGCGGTCTGTACGGC
GCGGAAGTGGCGGGGCAGTTGCGCCTGAGTCCTTGGTGGTGGTTCAGCGGCATCGGCTTGAGCCTGCTCGGCGCGTTGCT
GGCCGGGGCCAACAGTCTGCTGCGTGCAGCGCGACTGCCATTGCTGGCGGTGGCGGATCCGCAGGCCTGGCATCAGCAAC
ATGCGCGCTGGTTGCGGCGTCAGGGTTGGGTCGCGGGTATCTGTGCAGTGATTGCGCTGGCGGCGTTGGTGTGGGGCAAC
AGCCTGGGCAGCGGTTTTGTGTTGATGGCGGGGCTTTTGCTCGGCGCCGCGCTGGCGCTGCCGGTGTTGCTCAGTGCGTT
GCTCAACGGTTTGCTCGGTCGCAGCCGCTCGGTGCTCGGGCAGTGGTTTCTCGCCGATTGCCGCCAGCAATTGCCGGCGC
TGAGTCTGGCGTTGATGGCGCTGCTGCTGGCGATGGCGGCAAACATCGGTGCCGGCAGCATGACCGCCGGTTTCCGCCAG
ACCTTCAACGACTGGCTCGAACAACGGCTCACCGCCGAGCTTTATCTGAACCCGAGCAACCCGGCGCAGGCGCGGGAGCT
GTACACCTGGCTCAAACAGCAAGCGAATGTCACCGCGATCATGCCCAACTGGCAGGTCTCTGTGACGCTGCAAGGCTGGC
CGGCGGACGTGTTCGGGATCATCGATCATCCGCACTATCGCCAGCACTGGCCGTTGCTCGAATCTCGAGGAGACGACCCG
TGGGCGGCGCTGGCCAAGGACGATGCGGTGATGCTCAGCGAACAACTGGCGCGGCGCTTGAAAGTGACGCCGGGCGATCA
CCTGTCGATTCCCACGCCGGGCGGGTCGTGGTCGCCGCGCATCGTCGGCATCTACGCCGACTACGGCAATCCCAAGGGCC
ATGTGCTGGTCAACAGCAATCACCTGTTGCGCGGCTGGCCACAGCTGACGCCAAACCGCTTCAACCTGCGCATCGACCCG
CCGAACATCCCGGCGTTGCTCACGGCCTTGCAGGCACGCTTCCAGCTTGATGACAGCCGGATCGTCGATCAGGCGCGGCT
CAAGGGCTGGTCGGTGCAAGTCTTCGAACGCACCTTCGCCGCGACCGCCGCGCTGAATAGCCTGACGCTTGCCGTCGCCG
GCGTGGCGCTGTTCATCAGCCTGCTGACCCAGAGTCAGAGCCGTCTCGGCCAGCTCGCACCGTTGTGGGCGTTGGGCGTG
ACGCGACGGCAGTTGATGCTGCTCAACCTCGGGGAAACGTGGCTGTTGGCGCTGCTGACGCTGGTGCTGGCGTTGCCTTT
GGGCATCGGCCTGGCGTGGTGCCTGGACGCTGTGATCAACGTGCAGGCTTTTGGCTGGCGTCTGCCGCTGCGGGTGTTTC
CATGGCAGTTGCTGCAACTGATGGGGCTGGCGCTGCTGGCGACGTTGCTGGCCTCGGCGTGGCCGCTGTATTCGCTGTAC
CGCACGCAACCGGCGGACCTGCTGAGGACGTTTGCTCATGAAGACTAG

Upstream 100 bases:

>100_bases
TGCTGATGGTCACCCACAGTCAGCGCGTGGCGGCGCGGCTGGCGGAGCGCGTGGTGCTGTCCAGCGGTCGGTTGACGTGA
AGGTTTTCCGGCACGCGCTG

Downstream 100 bases:

>100_bases
GTTTGCGCTGGTGTTTTTGGCGTTGTTGCTCAGTGGTTGCGATAACTCCGCACCGGAGCAGAAGGGCTTTGCCGGGATGG
GCGCTCAGGCGCAGGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 815; Mature: 814

Protein sequence:

>815_residues
MALLSHWRRHPVQFFSVLTGLWLATSLLTGVEALNSQARDSYARASQLIGGEPQASLSTPNGATFPQQWFIDLRRQGWPV
SPMLQGRLILKGHENQRLQLMGIEPVSLPGDSAVAGQAMPIERIVEFFSPPGSTWISPETLRALNLAEGATPATETGQTL
PPLRAQTDMAPGVLLVDIGVAQRVLEQSDQLSRLLLPKDFHADVPAAFKGQLQLKSSGEENNLARLTESFHLNLDALGFL
SFIVGLFIVHAAIGLALEQRRGLLRTLRACGVSARMLIACLIVELGALALIGGLFGVVSGYWLASVLLPDVAASLRGLYG
AEVAGQLRLSPWWWFSGIGLSLLGALLAGANSLLRAARLPLLAVADPQAWHQQHARWLRRQGWVAGICAVIALAALVWGN
SLGSGFVLMAGLLLGAALALPVLLSALLNGLLGRSRSVLGQWFLADCRQQLPALSLALMALLLAMAANIGAGSMTAGFRQ
TFNDWLEQRLTAELYLNPSNPAQARELYTWLKQQANVTAIMPNWQVSVTLQGWPADVFGIIDHPHYRQHWPLLESRGDDP
WAALAKDDAVMLSEQLARRLKVTPGDHLSIPTPGGSWSPRIVGIYADYGNPKGHVLVNSNHLLRGWPQLTPNRFNLRIDP
PNIPALLTALQARFQLDDSRIVDQARLKGWSVQVFERTFAATAALNSLTLAVAGVALFISLLTQSQSRLGQLAPLWALGV
TRRQLMLLNLGETWLLALLTLVLALPLGIGLAWCLDAVINVQAFGWRLPLRVFPWQLLQLMGLALLATLLASAWPLYSLY
RTQPADLLRTFAHED

Sequences:

>Translated_815_residues
MALLSHWRRHPVQFFSVLTGLWLATSLLTGVEALNSQARDSYARASQLIGGEPQASLSTPNGATFPQQWFIDLRRQGWPV
SPMLQGRLILKGHENQRLQLMGIEPVSLPGDSAVAGQAMPIERIVEFFSPPGSTWISPETLRALNLAEGATPATETGQTL
PPLRAQTDMAPGVLLVDIGVAQRVLEQSDQLSRLLLPKDFHADVPAAFKGQLQLKSSGEENNLARLTESFHLNLDALGFL
SFIVGLFIVHAAIGLALEQRRGLLRTLRACGVSARMLIACLIVELGALALIGGLFGVVSGYWLASVLLPDVAASLRGLYG
AEVAGQLRLSPWWWFSGIGLSLLGALLAGANSLLRAARLPLLAVADPQAWHQQHARWLRRQGWVAGICAVIALAALVWGN
SLGSGFVLMAGLLLGAALALPVLLSALLNGLLGRSRSVLGQWFLADCRQQLPALSLALMALLLAMAANIGAGSMTAGFRQ
TFNDWLEQRLTAELYLNPSNPAQARELYTWLKQQANVTAIMPNWQVSVTLQGWPADVFGIIDHPHYRQHWPLLESRGDDP
WAALAKDDAVMLSEQLARRLKVTPGDHLSIPTPGGSWSPRIVGIYADYGNPKGHVLVNSNHLLRGWPQLTPNRFNLRIDP
PNIPALLTALQARFQLDDSRIVDQARLKGWSVQVFERTFAATAALNSLTLAVAGVALFISLLTQSQSRLGQLAPLWALGV
TRRQLMLLNLGETWLLALLTLVLALPLGIGLAWCLDAVINVQAFGWRLPLRVFPWQLLQLMGLALLATLLASAWPLYSLY
RTQPADLLRTFAHED
>Mature_814_residues
ALLSHWRRHPVQFFSVLTGLWLATSLLTGVEALNSQARDSYARASQLIGGEPQASLSTPNGATFPQQWFIDLRRQGWPVS
PMLQGRLILKGHENQRLQLMGIEPVSLPGDSAVAGQAMPIERIVEFFSPPGSTWISPETLRALNLAEGATPATETGQTLP
PLRAQTDMAPGVLLVDIGVAQRVLEQSDQLSRLLLPKDFHADVPAAFKGQLQLKSSGEENNLARLTESFHLNLDALGFLS
FIVGLFIVHAAIGLALEQRRGLLRTLRACGVSARMLIACLIVELGALALIGGLFGVVSGYWLASVLLPDVAASLRGLYGA
EVAGQLRLSPWWWFSGIGLSLLGALLAGANSLLRAARLPLLAVADPQAWHQQHARWLRRQGWVAGICAVIALAALVWGNS
LGSGFVLMAGLLLGAALALPVLLSALLNGLLGRSRSVLGQWFLADCRQQLPALSLALMALLLAMAANIGAGSMTAGFRQT
FNDWLEQRLTAELYLNPSNPAQARELYTWLKQQANVTAIMPNWQVSVTLQGWPADVFGIIDHPHYRQHWPLLESRGDDPW
AALAKDDAVMLSEQLARRLKVTPGDHLSIPTPGGSWSPRIVGIYADYGNPKGHVLVNSNHLLRGWPQLTPNRFNLRIDPP
NIPALLTALQARFQLDDSRIVDQARLKGWSVQVFERTFAATAALNSLTLAVAGVALFISLLTQSQSRLGQLAPLWALGVT
RRQLMLLNLGETWLLALLTLVLALPLGIGLAWCLDAVINVQAFGWRLPLRVFPWQLLQLMGLALLATLLASAWPLYSLYR
TQPADLLRTFAHED

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88747; Mature: 88615

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLSHWRRHPVQFFSVLTGLWLATSLLTGVEALNSQARDSYARASQLIGGEPQASLSTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NGATFPQQWFIDLRRQGWPVSPMLQGRLILKGHENQRLQLMGIEPVSLPGDSAVAGQAMP
CCCCCCHHHHHHHHHCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
IERIVEFFSPPGSTWISPETLRALNLAEGATPATETGQTLPPLRAQTDMAPGVLLVDIGV
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
AQRVLEQSDQLSRLLLPKDFHADVPAAFKGQLQLKSSGEENNLARLTESFHLNLDALGFL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHH
SFIVGLFIVHAAIGLALEQRRGLLRTLRACGVSARMLIACLIVELGALALIGGLFGVVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWLASVLLPDVAASLRGLYGAEVAGQLRLSPWWWFSGIGLSLLGALLAGANSLLRAARLP
HHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCC
LLAVADPQAWHQQHARWLRRQGWVAGICAVIALAALVWGNSLGSGFVLMAGLLLGAALAL
EEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
PVLLSALLNGLLGRSRSVLGQWFLADCRQQLPALSLALMALLLAMAANIGAGSMTAGFRQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TFNDWLEQRLTAELYLNPSNPAQARELYTWLKQQANVTAIMPNWQVSVTLQGWPADVFGI
HHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHH
IDHPHYRQHWPLLESRGDDPWAALAKDDAVMLSEQLARRLKVTPGDHLSIPTPGGSWSPR
CCCCCCHHCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCE
IVGIYADYGNPKGHVLVNSNHLLRGWPQLTPNRFNLRIDPPNIPALLTALQARFQLDDSR
EEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHH
IVDQARLKGWSVQVFERTFAATAALNSLTLAVAGVALFISLLTQSQSRLGQLAPLWALGV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRRQLMLLNLGETWLLALLTLVLALPLGIGLAWCLDAVINVQAFGWRLPLRVFPWQLLQL
HHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHCCHHHHHH
MGLALLATLLASAWPLYSLYRTQPADLLRTFAHED
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
ALLSHWRRHPVQFFSVLTGLWLATSLLTGVEALNSQARDSYARASQLIGGEPQASLSTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NGATFPQQWFIDLRRQGWPVSPMLQGRLILKGHENQRLQLMGIEPVSLPGDSAVAGQAMP
CCCCCCHHHHHHHHHCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
IERIVEFFSPPGSTWISPETLRALNLAEGATPATETGQTLPPLRAQTDMAPGVLLVDIGV
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
AQRVLEQSDQLSRLLLPKDFHADVPAAFKGQLQLKSSGEENNLARLTESFHLNLDALGFL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHH
SFIVGLFIVHAAIGLALEQRRGLLRTLRACGVSARMLIACLIVELGALALIGGLFGVVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWLASVLLPDVAASLRGLYGAEVAGQLRLSPWWWFSGIGLSLLGALLAGANSLLRAARLP
HHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCC
LLAVADPQAWHQQHARWLRRQGWVAGICAVIALAALVWGNSLGSGFVLMAGLLLGAALAL
EEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
PVLLSALLNGLLGRSRSVLGQWFLADCRQQLPALSLALMALLLAMAANIGAGSMTAGFRQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TFNDWLEQRLTAELYLNPSNPAQARELYTWLKQQANVTAIMPNWQVSVTLQGWPADVFGI
HHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHH
IDHPHYRQHWPLLESRGDDPWAALAKDDAVMLSEQLARRLKVTPGDHLSIPTPGGSWSPR
CCCCCCHHCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCE
IVGIYADYGNPKGHVLVNSNHLLRGWPQLTPNRFNLRIDPPNIPALLTALQARFQLDDSR
EEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHH
IVDQARLKGWSVQVFERTFAATAALNSLTLAVAGVALFISLLTQSQSRLGQLAPLWALGV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRRQLMLLNLGETWLLALLTLVLALPLGIGLAWCLDAVINVQAFGWRLPLRVFPWQLLQL
HHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHCCHHHHHH
MGLALLATLLASAWPLYSLYRTQPADLLRTFAHED
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA