| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458255
Identifier: 77458255
GI number: 77458255
Start: 2313904
End: 2314971
Strand: Direct
Name: 77458255
Synonym: Pfl01_2028
Alternate gene names: NA
Gene position: 2313904-2314971 (Clockwise)
Preceding gene: 77458254
Following gene: 77458256
Centisome position: 35.94
GC content: 63.48
Gene sequence:
>1068_bases ATGAAGACTAGGTTTGCGCTGGTGTTTTTGGCGTTGTTGCTCAGTGGTTGCGATAACTCCGCACCGGAGCAGAAGGGCTT TGCCGGGATGGGCGCTCAGGCGCAGGCGTTTACGCCGGTGGTGCCGGGTCGGGTGTTCAGCTTCCCGGCGGATCACGGCG CCCATGACGGTTTTCGTATCGAATGGTGGTACGTGACGGCCAATCTCAAGGATGCGCAGGGCAACGATTTCGGCGTGCAG TGGACGTTGTTTCGCAGCGCTCTGAACGCCTCGCCGCCGCAGCCGGGATGGGCCAACCAGACGATCTGGCTCGGGCATGC GGCGGTCACCTCGGCCAGCGTCCACCATGCCGCCGAGCGTTACGCCCGTGGCGGCGTGGGGCAGGCCGGCGTGCGTGCGG CGCCGTTCGAGGCGTGGATCGATGACTGGCGTTTCGTCAGTCAGGCGAGCGATCCGCTGAGCGACATGCAACTCAGCGCA ATGGACAAAAATTTCAGCTACCAACTGCGCCTGACCTCCAGCCGCCCGCTGGTGCTGCAGGGCGACAAGGGTTTCAGTCA GAAATCCGAACAGGGCCAGGCGTCGTATTACTACAGCCAGCCGTTTTTCCAGGCCAGCGGAACCCTGCAGATCGACGGCC AGACCTACACCGTCAACGGCCCGGCCTGGCTCGACCGCGAATGGAGCAGCCAGCCGCTGACCGCCAACCAGACGGGCTGG GACTGGTTTTCCCTGCATCTGGACAGCGGCGAACACGTCATGCTGTACCGCATGCGCCAGAAGGAAGGGGCGCCGTACCT GACCGGCACGTGGATTGCCGCCGATGGCCAGACCGAAACCCTGCACGCCGAGCAGATCAAGCTGACCCCGCAAGGCACTG CGAAGGTCGCCGGCCGTTCGATGCCGGTGCGTTGGTCGATCGAGATTCCGCAAAAAAATCTGCAGATCACCCTCGATGCA ATCAACCCCGATGCCTGGATGAACCTGCGCATTCCGTATTGGGAAGGGCCGGTGCGCCTGAGCGGCAATCGGGGCGGGCA GGGCTATCTGGAGATGACCGGGTACTGA
Upstream 100 bases:
>100_bases CTGATGGGGCTGGCGCTGCTGGCGACGTTGCTGGCCTCGGCGTGGCCGCTGTATTCGCTGTACCGCACGCAACCGGCGGA CCTGCTGAGGACGTTTGCTC
Downstream 100 bases:
>100_bases TTTCGCGCGCCATGCGTGCGAATGGATCGATTGGAACTCTGTCGAGGATGCTCCCTCTACCGAGAAACATGGCCGAGGAT CCGATCCATGAGCGAGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKTRFALVFLALLLSGCDNSAPEQKGFAGMGAQAQAFTPVVPGRVFSFPADHGAHDGFRIEWWYVTANLKDAQGNDFGVQ WTLFRSALNASPPQPGWANQTIWLGHAAVTSASVHHAAERYARGGVGQAGVRAAPFEAWIDDWRFVSQASDPLSDMQLSA MDKNFSYQLRLTSSRPLVLQGDKGFSQKSEQGQASYYYSQPFFQASGTLQIDGQTYTVNGPAWLDREWSSQPLTANQTGW DWFSLHLDSGEHVMLYRMRQKEGAPYLTGTWIAADGQTETLHAEQIKLTPQGTAKVAGRSMPVRWSIEIPQKNLQITLDA INPDAWMNLRIPYWEGPVRLSGNRGGQGYLEMTGY
Sequences:
>Translated_355_residues MKTRFALVFLALLLSGCDNSAPEQKGFAGMGAQAQAFTPVVPGRVFSFPADHGAHDGFRIEWWYVTANLKDAQGNDFGVQ WTLFRSALNASPPQPGWANQTIWLGHAAVTSASVHHAAERYARGGVGQAGVRAAPFEAWIDDWRFVSQASDPLSDMQLSA MDKNFSYQLRLTSSRPLVLQGDKGFSQKSEQGQASYYYSQPFFQASGTLQIDGQTYTVNGPAWLDREWSSQPLTANQTGW DWFSLHLDSGEHVMLYRMRQKEGAPYLTGTWIAADGQTETLHAEQIKLTPQGTAKVAGRSMPVRWSIEIPQKNLQITLDA INPDAWMNLRIPYWEGPVRLSGNRGGQGYLEMTGY >Mature_355_residues MKTRFALVFLALLLSGCDNSAPEQKGFAGMGAQAQAFTPVVPGRVFSFPADHGAHDGFRIEWWYVTANLKDAQGNDFGVQ WTLFRSALNASPPQPGWANQTIWLGHAAVTSASVHHAAERYARGGVGQAGVRAAPFEAWIDDWRFVSQASDPLSDMQLSA MDKNFSYQLRLTSSRPLVLQGDKGFSQKSEQGQASYYYSQPFFQASGTLQIDGQTYTVNGPAWLDREWSSQPLTANQTGW DWFSLHLDSGEHVMLYRMRQKEGAPYLTGTWIAADGQTETLHAEQIKLTPQGTAKVAGRSMPVRWSIEIPQKNLQITLDA INPDAWMNLRIPYWEGPVRLSGNRGGQGYLEMTGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39386; Mature: 39386
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRFALVFLALLLSGCDNSAPEQKGFAGMGAQAQAFTPVVPGRVFSFPADHGAHDGFRI CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEE EWWYVTANLKDAQGNDFGVQWTLFRSALNASPPQPGWANQTIWLGHAAVTSASVHHAAER EEEEEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH YARGGVGQAGVRAAPFEAWIDDWRFVSQASDPLSDMQLSAMDKNFSYQLRLTSSRPLVLQ HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCEEEEECCCCEEEEEECCCCCEEEE GDKGFSQKSEQGQASYYYSQPFFQASGTLQIDGQTYTVNGPAWLDREWSSQPLTANQTGW CCCCCCCCCCCCCEEEEECCCEEECCCEEEECCEEEEECCCEEECCCCCCCCCCCCCCCC DWFSLHLDSGEHVMLYRMRQKEGAPYLTGTWIAADGQTETLHAEQIKLTPQGTAKVAGRS EEEEEEECCCCEEEEEEEEHHCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCHHHCCCC MPVRWSIEIPQKNLQITLDAINPDAWMNLRIPYWEGPVRLSGNRGGQGYLEMTGY CCEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEECCC >Mature Secondary Structure MKTRFALVFLALLLSGCDNSAPEQKGFAGMGAQAQAFTPVVPGRVFSFPADHGAHDGFRI CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEE EWWYVTANLKDAQGNDFGVQWTLFRSALNASPPQPGWANQTIWLGHAAVTSASVHHAAER EEEEEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH YARGGVGQAGVRAAPFEAWIDDWRFVSQASDPLSDMQLSAMDKNFSYQLRLTSSRPLVLQ HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCEEEEECCCCEEEEEECCCCCEEEE GDKGFSQKSEQGQASYYYSQPFFQASGTLQIDGQTYTVNGPAWLDREWSSQPLTANQTGW CCCCCCCCCCCCCEEEEECCCEEECCCEEEECCEEEEECCCEEECCCCCCCCCCCCCCCC DWFSLHLDSGEHVMLYRMRQKEGAPYLTGTWIAADGQTETLHAEQIKLTPQGTAKVAGRS EEEEEEECCCCEEEEEEEEHHCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCHHHCCCC MPVRWSIEIPQKNLQITLDAINPDAWMNLRIPYWEGPVRLSGNRGGQGYLEMTGY CCEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA