| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is phnB [H]
Identifier: 77458177
GI number: 77458177
Start: 2224638
End: 2225051
Strand: Reverse
Name: phnB [H]
Synonym: Pfl01_1950
Alternate gene names: 77458177
Gene position: 2225051-2224638 (Counterclockwise)
Preceding gene: 77458178
Following gene: 77458171
Centisome position: 34.56
GC content: 57.25
Gene sequence:
>414_bases ATGAAAATCAACCCGTACCTGATCTTCAACGGCGACTGCCGCGCAGCCTTTACGTTTTACGAGCAATGCCTGCAAGGCAA GCTCGAAGCGATGATGACCTTCGGCGAAACGCCAGCCGCCGAACATGTACCGAAAGAGCACCACAACCTGATCATTCACA CCTGCCTGAAAGTCGGTGATCAGATGCTCATGGCTTCGGACACCACCCCCGACCGCCCGACCCAAGGCATGAGCGGTTGC TCGATTTCGCTGAATGTCGACAGCATCGTCGAGGCCGAGCGGGTATTTAACGCCCTGGCCAGAGACGGTCGCGTCGACAT GCCGCTGGAAGCCACCTTCTGGGCCGCACGATTCGGCATGCTGGTGGATCGTTTTGGCGTGTCGTGGATGGTCAATTGCG AAAGTGACAAGTGA
Upstream 100 bases:
>100_bases AATTCGGCGATCTGACGCTTTGCTGGATGGAGTCAATCCATGACGCTGCTTCGGCACACCCGGCCGCGCAGCGTTCCACT GCCTATTCGGGAGCACCACC
Downstream 100 bases:
>100_bases CGCTGTCATTGCGCCGGACATGAAAAAGCCCGACCTTTTCAGGTCGGGCTTTTTCGTTCAACGCTGGGCCAATTCGTGGC GAATGCACTGTTCGTAATAG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKINPYLIFNGDCRAAFTFYEQCLQGKLEAMMTFGETPAAEHVPKEHHNLIIHTCLKVGDQMLMASDTTPDRPTQGMSGC SISLNVDSIVEAERVFNALARDGRVDMPLEATFWAARFGMLVDRFGVSWMVNCESDK
Sequences:
>Translated_137_residues MKINPYLIFNGDCRAAFTFYEQCLQGKLEAMMTFGETPAAEHVPKEHHNLIIHTCLKVGDQMLMASDTTPDRPTQGMSGC SISLNVDSIVEAERVFNALARDGRVDMPLEATFWAARFGMLVDRFGVSWMVNCESDK >Mature_137_residues MKINPYLIFNGDCRAAFTFYEQCLQGKLEAMMTFGETPAAEHVPKEHHNLIIHTCLKVGDQMLMASDTTPDRPTQGMSGC SISLNVDSIVEAERVFNALARDGRVDMPLEATFWAARFGMLVDRFGVSWMVNCESDK
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=141, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15339; Mature: 15339
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINPYLIFNGDCRAAFTFYEQCLQGKLEAMMTFGETPAAEHVPKEHHNLIIHTCLKVGD CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC QMLMASDTTPDRPTQGMSGCSISLNVDSIVEAERVFNALARDGRVDMPLEATFWAARFGM CEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LVDRFGVSWMVNCESDK HHHHCCCEEEEEECCCC >Mature Secondary Structure MKINPYLIFNGDCRAAFTFYEQCLQGKLEAMMTFGETPAAEHVPKEHHNLIIHTCLKVGD CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC QMLMASDTTPDRPTQGMSGCSISLNVDSIVEAERVFNALARDGRVDMPLEATFWAARFGM CEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LVDRFGVSWMVNCESDK HHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]