| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mtnD [H]
Identifier: 77457952
GI number: 77457952
Start: 1918494
End: 1919099
Strand: Direct
Name: mtnD [H]
Synonym: Pfl01_1725
Alternate gene names: 77457952
Gene position: 1918494-1919099 (Clockwise)
Preceding gene: 77457951
Following gene: 77457953
Centisome position: 29.8
GC content: 59.08
Gene sequence:
>606_bases ATGCAGTGCCCGACCGGTCTCGAAGAACCGGACGGCAAGGCCGATACCGAGGAATGCCCCATGAGCAGCCTGTCCGTCTA TCACGTTTCCAGCCCCGAGATTCCGAACAAGGTGCTGACCCATTTCGAAGACATCGCTTCGACCCTGGCCGAGCAGGGCG TGCGCTTCGACCGTTGGCAAGCCGCCGCGAAGATCCAGCCCGGCGCCAGCCAGGAAGAAGTGATCGGTGCTTATAAAGAG CAGATCGACAAACTGATGACTGAGCGCGGCTACATCACGGTCGACGTGATCAGCCTCAACAGCGACCACCCACAAAAAGC CGAATTGCGCGCCAAGTTCCTCGAAGAACATCGGCATGGCGAAGACGAAGTACGCTTCTTCGTTGCCGGTCGCGGTCTGT TTACCCTGCACATCGACGATTACGTCTACGCCGTGCTGTGCGAGAAGAACGACCTGATTTCGGTGCCGGCCGGTACCAAG CATTGGTTCGATATGGGCGAGAACCCGCATTTCGTGGCGATCCGTCTGTTCAACAACCCTGAAGGCTGGGTCGCCAACTT CACCGGCGAAGACATCGCCGGTCGCTTCCCGCGTCTGGAGGACTGA
Upstream 100 bases:
>100_bases ATCGAGGCCTTTGAATTCCTGTTTGAATGCGAGTTGAAGACCCGCAGCGTCATGAACCGCCAAGGCTGACTTCACCAGAA CCAGCCCCTTTGCCCGATGA
Downstream 100 bases:
>100_bases GCGATGTCGATCAAGGTCATTCTCACCGACATCGAAGGCACCACCAGCGCGGTGAGTTTTGTGTTCGACGTGCTGTTCCC ATATGCCGCCAAACACCTGC
Product: acireductone dioxygenase, ARD
Products: NA
Alternate protein names: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MQCPTGLEEPDGKADTEECPMSSLSVYHVSSPEIPNKVLTHFEDIASTLAEQGVRFDRWQAAAKIQPGASQEEVIGAYKE QIDKLMTERGYITVDVISLNSDHPQKAELRAKFLEEHRHGEDEVRFFVAGRGLFTLHIDDYVYAVLCEKNDLISVPAGTK HWFDMGENPHFVAIRLFNNPEGWVANFTGEDIAGRFPRLED
Sequences:
>Translated_201_residues MQCPTGLEEPDGKADTEECPMSSLSVYHVSSPEIPNKVLTHFEDIASTLAEQGVRFDRWQAAAKIQPGASQEEVIGAYKE QIDKLMTERGYITVDVISLNSDHPQKAELRAKFLEEHRHGEDEVRFFVAGRGLFTLHIDDYVYAVLCEKNDLISVPAGTK HWFDMGENPHFVAIRLFNNPEGWVANFTGEDIAGRFPRLED >Mature_201_residues MQCPTGLEEPDGKADTEECPMSSLSVYHVSSPEIPNKVLTHFEDIASTLAEQGVRFDRWQAAAKIQPGASQEEVIGAYKE QIDKLMTERGYITVDVISLNSDHPQKAELRAKFLEEHRHGEDEVRFFVAGRGLFTLHIDDYVYAVLCEKNDLISVPAGTK HWFDMGENPHFVAIRLFNNPEGWVANFTGEDIAGRFPRLED
Specific function: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- me
COG id: COG1791
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acireductone dioxygenase (ARD) family [H]
Homologues:
Organism=Homo sapiens, GI171460928, Length=107, Percent_Identity=33.6448598130841, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004313 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF03079 ARD [H]
EC number: =1.13.11.54; =1.13.11.53 [H]
Molecular weight: Translated: 22679; Mature: 22679
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQCPTGLEEPDGKADTEECPMSSLSVYHVSSPEIPNKVLTHFEDIASTLAEQGVRFDRWQ CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AAAKIQPGASQEEVIGAYKEQIDKLMTERGYITVDVISLNSDHPQKAELRAKFLEEHRHG HHEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC EDEVRFFVAGRGLFTLHIDDYVYAVLCEKNDLISVPAGTKHWFDMGENPHFVAIRLFNNP CCCEEEEEECCCEEEEEECCEEEEEEECCCCEEECCCCCCHHHCCCCCCCEEEEEEEECC EGWVANFTGEDIAGRFPRLED CCEEEECCCCCHHCCCCCCCC >Mature Secondary Structure MQCPTGLEEPDGKADTEECPMSSLSVYHVSSPEIPNKVLTHFEDIASTLAEQGVRFDRWQ CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AAAKIQPGASQEEVIGAYKEQIDKLMTERGYITVDVISLNSDHPQKAELRAKFLEEHRHG HHEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC EDEVRFFVAGRGLFTLHIDDYVYAVLCEKNDLISVPAGTKHWFDMGENPHFVAIRLFNNP CCCEEEEEECCCEEEEEECCEEEEEEECCCCEEECCCCCCHHHCCCCCCCEEEEEEEECC EGWVANFTGEDIAGRFPRLED CCEEEECCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA