| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457820
Identifier: 77457820
GI number: 77457820
Start: 1779219
End: 1780133
Strand: Reverse
Name: 77457820
Synonym: Pfl01_1593
Alternate gene names: NA
Gene position: 1780133-1779219 (Counterclockwise)
Preceding gene: 77457821
Following gene: 77457819
Centisome position: 27.65
GC content: 64.59
Gene sequence:
>915_bases ATGCCTGCCAATCATTTCAACACCCACTGCCCTGACTGGGCCGAGGCTTTGCTCAACGGCTTCAGTCAAATCTTCCTCCA GCGCCATCCGCTGTGTGGCCTGCTGTGCCTTCTGGCCATTTTATTCACCGCGCCGGTGCTGTTCGCCGGCGCGCTGCTCG GTGCGGTCGCCGGTTTGCTCACCGCGCAACGGCGCAACTACGCCAAGGCGGATCGCCAGGCCGGACTGTTCAGCTACAAC GGCGTGCTGGTCGGCCTGTTGCTGAGCCTGTATTTCCCTTGGTCGCCGATGCTGCCGCCGCTGATTCTGGCGGCCGGTGG CCTGAGCGCGATGATCACGCAGCAATGGCTCAAACGCGCACGCCTCACCGAATACCTGCCCGCCTACACCGCGCCGTTCG TGTTGCTGAGCTGGGTGTTCCTGTGTTTCGCCGAGCCTTTGTCCGCCGCACCGGTGCTTGAACTGAACACCGTGAACCTG CTCGGTGCCGCCCTGAAAGGTTTCGGTCAGGTGATGTTCCTCGATCATCCGCTGGCCGGTGGTTTGATCGCTGCCGGTTT GCTGATCGCCGATCGCCGGGCCTTTGCCTGGGCGCTGCTGGCTTCGGCGATTGGCCTGGGTTCCAGCCTGTTGCACCACG ACAGTCAGGTCGCGTTGCTCGGTCTGGGTGGCTACAACGCGGTACTTGCCGCCCTCGCCTTCAGCACCCAGCGCCAGCAA CCGTGGCTGCCGCTGTTCGGCATCGGCCTGGCGCTGCTGTTGGCGCCGCTGTTCAGCGCCCTGGGTCTGGCGCCCCTCAC TGCACCGTTCATTCTCGCCTGCTGGCTGCTGCGCACCGGCATTCGCCTGATGCAGCAACCGCAGATCAGCGGCGCGCCTT GCGCTCACGGGGAGAATCAACCTAGGCTGCGCTGA
Upstream 100 bases:
>100_bases ACGGTTTCCACAAGAGACGCCGCATGCACCGGGCACGAGCTCCCTCGCCACCGTTTCACGCAAGACCCTTTGATTTTCCT ACTGCCCAGATTCTCCAGAC
Downstream 100 bases:
>100_bases TCTTTGATTCAGGCGTGATCCATGGACAGTAACAAGCACTGGCGTGAACAGCTTTACGTCATGATTTTCCAGAGCGACAC CCCCGCCGGGCGACGTTTCG
Product: Urea transporter
Products: NA
Alternate protein names: ABC Transporter Membrane Protein
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPANHFNTHCPDWAEALLNGFSQIFLQRHPLCGLLCLLAILFTAPVLFAGALLGAVAGLLTAQRRNYAKADRQAGLFSYN GVLVGLLLSLYFPWSPMLPPLILAAGGLSAMITQQWLKRARLTEYLPAYTAPFVLLSWVFLCFAEPLSAAPVLELNTVNL LGAALKGFGQVMFLDHPLAGGLIAAGLLIADRRAFAWALLASAIGLGSSLLHHDSQVALLGLGGYNAVLAALAFSTQRQQ PWLPLFGIGLALLLAPLFSALGLAPLTAPFILACWLLRTGIRLMQQPQISGAPCAHGENQPRLR
Sequences:
>Translated_304_residues MPANHFNTHCPDWAEALLNGFSQIFLQRHPLCGLLCLLAILFTAPVLFAGALLGAVAGLLTAQRRNYAKADRQAGLFSYN GVLVGLLLSLYFPWSPMLPPLILAAGGLSAMITQQWLKRARLTEYLPAYTAPFVLLSWVFLCFAEPLSAAPVLELNTVNL LGAALKGFGQVMFLDHPLAGGLIAAGLLIADRRAFAWALLASAIGLGSSLLHHDSQVALLGLGGYNAVLAALAFSTQRQQ PWLPLFGIGLALLLAPLFSALGLAPLTAPFILACWLLRTGIRLMQQPQISGAPCAHGENQPRLR >Mature_303_residues PANHFNTHCPDWAEALLNGFSQIFLQRHPLCGLLCLLAILFTAPVLFAGALLGAVAGLLTAQRRNYAKADRQAGLFSYNG VLVGLLLSLYFPWSPMLPPLILAAGGLSAMITQQWLKRARLTEYLPAYTAPFVLLSWVFLCFAEPLSAAPVLELNTVNLL GAALKGFGQVMFLDHPLAGGLIAAGLLIADRRAFAWALLASAIGLGSSLLHHDSQVALLGLGGYNAVLAALAFSTQRQQP WLPLFGIGLALLLAPLFSALGLAPLTAPFILACWLLRTGIRLMQQPQISGAPCAHGENQPRLR
Specific function: Unknown
COG id: COG4413
COG function: function code E; Urea transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI157694503, Length=292, Percent_Identity=29.7945205479452, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32506; Mature: 32375
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANHFNTHCPDWAEALLNGFSQIFLQRHPLCGLLCLLAILFTAPVLFAGALLGAVAGLL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAQRRNYAKADRQAGLFSYNGVLVGLLLSLYFPWSPMLPPLILAAGGLSAMITQQWLKRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RLTEYLPAYTAPFVLLSWVFLCFAEPLSAAPVLELNTVNLLGAALKGFGQVMFLDHPLAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCEEEECCCCHH GLIAAGLLIADRRAFAWALLASAIGLGSSLLHHDSQVALLGLGGYNAVLAALAFSTQRQQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC PWLPLFGIGLALLLAPLFSALGLAPLTAPFILACWLLRTGIRLMQQPQISGAPCAHGENQ CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PRLR CCCC >Mature Secondary Structure PANHFNTHCPDWAEALLNGFSQIFLQRHPLCGLLCLLAILFTAPVLFAGALLGAVAGLL CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAQRRNYAKADRQAGLFSYNGVLVGLLLSLYFPWSPMLPPLILAAGGLSAMITQQWLKRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RLTEYLPAYTAPFVLLSWVFLCFAEPLSAAPVLELNTVNLLGAALKGFGQVMFLDHPLAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCEEEECCCCHH GLIAAGLLIADRRAFAWALLASAIGLGSSLLHHDSQVALLGLGGYNAVLAALAFSTQRQQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC PWLPLFGIGLALLLAPLFSALGLAPLTAPFILACWLLRTGIRLMQQPQISGAPCAHGENQ CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PRLR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA