| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457819
Identifier: 77457819
GI number: 77457819
Start: 1778373
End: 1779197
Strand: Reverse
Name: 77457819
Synonym: Pfl01_1592
Alternate gene names: NA
Gene position: 1779197-1778373 (Counterclockwise)
Preceding gene: 77457820
Following gene: 77457818
Centisome position: 27.63
GC content: 55.52
Gene sequence:
>825_bases ATGGACAGTAACAAGCACTGGCGTGAACAGCTTTACGTCATGATTTTCCAGAGCGACACCCCCGCCGGGCGACGTTTCGA CGGCATTCTGCTGCTGATCATTCTGGCCAGCCTGGTGATCGTGATGCTCGACAGCATCGACAGCGTTCACCGCAATTACG CCGATGTGCTGGCGTATATCGAGTGGGGGTTCACCATCATCTTTGCCGGCGAATACATTCTGCGTCTGTACTGCTCGCCC AAACCGTTGCGCTATGCCTTCAGTTTTTACGGATTGGTGGATCTGCTGGCGATCGTGCCGGGCATCCTCGCGCTGTACTA CAGCGATGCGCAGTACCTGTTGATTATCCGGATCATCCGGATGCTGCGAATTTTCCGCGTCCTCAAACTCAGTCCGTACC TCAAGCAAGCCAACTACCTGATGTCGGCGCTGCGTGGCAGCAAGCAGAAGATCGTGGTGTTTCTGGTGAGCGTCTGCACA CTCGTAACGGTGTTCGGTACGTTGATGTACGTGATCGAAGGCCCGGAACACGGTTTCACCAGCATTCCCAAGGGCATCTA TTGGGCTATCGTGACCCTGACCACCGTCGGCTTCGGCGACATCGTGCCGAAGACTCCGTTGGGCCAGGTGATTTCGTCGC TGGTGATGATCACCGGTTACTCGATCATCGCCGTGCCCACCGGGATCTTCACCGCCGAACTGGCCAATGCGATGCGTGGT GAACAGTTGCAACACGACTGCCCGGTTTGCCAGAAAAAGAGCCATGAAAGCGGCGCCGCCTTCTGTTCGCGATGCGGCAA TCAGTTATTCAAGAAAATAGAATAA
Upstream 100 bases:
>100_bases CGGCATTCGCCTGATGCAGCAACCGCAGATCAGCGGCGCGCCTTGCGCTCACGGGGAGAATCAACCTAGGCTGCGCTGAT CTTTGATTCAGGCGTGATCC
Downstream 100 bases:
>100_bases GCAAAGTTCTTTTTAATCTTTAAACGACTATGCGTGCCCCGCTATAGTCGCTGGCAAATGGCCTCATCTTTGTAAAAAAA CACCCCTACAGAACAAGGAA
Product: Ion transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MDSNKHWREQLYVMIFQSDTPAGRRFDGILLLIILASLVIVMLDSIDSVHRNYADVLAYIEWGFTIIFAGEYILRLYCSP KPLRYAFSFYGLVDLLAIVPGILALYYSDAQYLLIIRIIRMLRIFRVLKLSPYLKQANYLMSALRGSKQKIVVFLVSVCT LVTVFGTLMYVIEGPEHGFTSIPKGIYWAIVTLTTVGFGDIVPKTPLGQVISSLVMITGYSIIAVPTGIFTAELANAMRG EQLQHDCPVCQKKSHESGAAFCSRCGNQLFKKIE
Sequences:
>Translated_274_residues MDSNKHWREQLYVMIFQSDTPAGRRFDGILLLIILASLVIVMLDSIDSVHRNYADVLAYIEWGFTIIFAGEYILRLYCSP KPLRYAFSFYGLVDLLAIVPGILALYYSDAQYLLIIRIIRMLRIFRVLKLSPYLKQANYLMSALRGSKQKIVVFLVSVCT LVTVFGTLMYVIEGPEHGFTSIPKGIYWAIVTLTTVGFGDIVPKTPLGQVISSLVMITGYSIIAVPTGIFTAELANAMRG EQLQHDCPVCQKKSHESGAAFCSRCGNQLFKKIE >Mature_274_residues MDSNKHWREQLYVMIFQSDTPAGRRFDGILLLIILASLVIVMLDSIDSVHRNYADVLAYIEWGFTIIFAGEYILRLYCSP KPLRYAFSFYGLVDLLAIVPGILALYYSDAQYLLIIRIIRMLRIFRVLKLSPYLKQANYLMSALRGSKQKIVVFLVSVCT LVTVFGTLMYVIEGPEHGFTSIPKGIYWAIVTLTTVGFGDIVPKTPLGQVISSLVMITGYSIIAVPTGIFTAELANAMRG EQLQHDCPVCQKKSHESGAAFCSRCGNQLFKKIE
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cyclic nucleotide-binding domain [H]
Homologues:
Organism=Homo sapiens, GI27436974, Length=255, Percent_Identity=26.6666666666667, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI20070166, Length=216, Percent_Identity=34.7222222222222, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI4826784, Length=228, Percent_Identity=28.9473684210526, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI88758565, Length=189, Percent_Identity=31.2169312169312, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI27436981, Length=175, Percent_Identity=31.4285714285714, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI9789987, Length=205, Percent_Identity=29.2682926829268, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4826782, Length=192, Percent_Identity=31.25, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI25952108, Length=246, Percent_Identity=27.6422764227642, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI25952087, Length=223, Percent_Identity=28.2511210762332, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI27436986, Length=195, Percent_Identity=29.7435897435897, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI27436984, Length=195, Percent_Identity=29.7435897435897, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI119395748, Length=260, Percent_Identity=26.9230769230769, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI88758576, Length=208, Percent_Identity=30.7692307692308, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI24497462, Length=208, Percent_Identity=30.7692307692308, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI45383011, Length=267, Percent_Identity=27.3408239700375, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI4504817, Length=195, Percent_Identity=29.7435897435897, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI5031819, Length=116, Percent_Identity=39.6551724137931, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI27436988, Length=184, Percent_Identity=33.695652173913, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI25952092, Length=179, Percent_Identity=31.8435754189944, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI24497458, Length=188, Percent_Identity=29.7872340425532, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI21217561, Length=188, Percent_Identity=29.7872340425532, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI21217563, Length=188, Percent_Identity=29.7872340425532, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI19424136, Length=230, Percent_Identity=27.3913043478261, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI24497460, Length=203, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4826786, Length=187, Percent_Identity=29.4117647058824, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI163792201, Length=187, Percent_Identity=29.4117647058824, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI27436993, Length=176, Percent_Identity=29.5454545454545, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI19071574, Length=176, Percent_Identity=29.5454545454545, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI4504821, Length=215, Percent_Identity=26.9767441860465, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI13492973, Length=198, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI27436996, Length=183, Percent_Identity=31.1475409836066, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7657289, Length=236, Percent_Identity=25.8474576271186, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI32479525, Length=233, Percent_Identity=27.4678111587983, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI32479527, Length=234, Percent_Identity=27.3504273504274, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4758630, Length=254, Percent_Identity=24.4094488188976, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI26638655, Length=228, Percent_Identity=21.9298245614035, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI26051268, Length=258, Percent_Identity=21.3178294573643, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI26638653, Length=228, Percent_Identity=21.9298245614035, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI236462242, Length=232, Percent_Identity=20.6896551724138, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI26051266, Length=230, Percent_Identity=21.304347826087, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI236461719, Length=232, Percent_Identity=20.6896551724138, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI236462079, Length=232, Percent_Identity=20.6896551724138, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI236461942, Length=232, Percent_Identity=20.6896551724138, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71989381, Length=175, Percent_Identity=37.7142857142857, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71989369, Length=175, Percent_Identity=37.7142857142857, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71989376, Length=175, Percent_Identity=37.7142857142857, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71989361, Length=175, Percent_Identity=37.7142857142857, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI193206869, Length=230, Percent_Identity=30.8695652173913, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17544122, Length=206, Percent_Identity=28.6407766990291, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25148255, Length=190, Percent_Identity=33.6842105263158, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17569273, Length=225, Percent_Identity=27.5555555555556, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI71994313, Length=200, Percent_Identity=32, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71994134, Length=194, Percent_Identity=27.319587628866, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71986574, Length=205, Percent_Identity=28.780487804878, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994320, Length=201, Percent_Identity=32.3383084577114, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71986008, Length=187, Percent_Identity=34.7593582887701, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71986003, Length=187, Percent_Identity=34.7593582887701, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71986011, Length=187, Percent_Identity=34.7593582887701, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI32564084, Length=155, Percent_Identity=29.6774193548387, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564076, Length=155, Percent_Identity=29.6774193548387, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564090, Length=155, Percent_Identity=29.6774193548387, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564088, Length=155, Percent_Identity=29.6774193548387, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564086, Length=155, Percent_Identity=29.6774193548387, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564082, Length=155, Percent_Identity=29.6774193548387, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564080, Length=155, Percent_Identity=29.6774193548387, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI72000220, Length=198, Percent_Identity=29.7979797979798, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32564068, Length=217, Percent_Identity=29.9539170506912, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI32564070, Length=217, Percent_Identity=29.9539170506912, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI32564072, Length=217, Percent_Identity=29.9539170506912, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI115532628, Length=217, Percent_Identity=29.9539170506912, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI32564074, Length=217, Percent_Identity=29.9539170506912, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71998749, Length=217, Percent_Identity=29.9539170506912, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI25147238, Length=228, Percent_Identity=25.8771929824561, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25147242, Length=228, Percent_Identity=25.8771929824561, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI32564066, Length=235, Percent_Identity=25.9574468085106, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71985535, Length=206, Percent_Identity=28.1553398058252, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193207406, Length=218, Percent_Identity=25.2293577981651, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24656294, Length=233, Percent_Identity=31.7596566523605, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI116007764, Length=233, Percent_Identity=31.7596566523605, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24656289, Length=233, Percent_Identity=31.7596566523605, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI281365536, Length=233, Percent_Identity=31.7596566523605, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI17737641, Length=211, Percent_Identity=28.436018957346, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI161084970, Length=211, Percent_Identity=28.436018957346, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17136468, Length=219, Percent_Identity=27.3972602739726, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI28574020, Length=219, Percent_Identity=27.3972602739726, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI221330674, Length=219, Percent_Identity=27.3972602739726, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24642914, Length=219, Percent_Identity=27.3972602739726, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI24642916, Length=303, Percent_Identity=24.4224422442244, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI24642910, Length=290, Percent_Identity=24.8275862068966, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI45555859, Length=273, Percent_Identity=25.6410256410256, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI45549143, Length=273, Percent_Identity=25.6410256410256, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI161076829, Length=189, Percent_Identity=29.1005291005291, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI221330117, Length=230, Percent_Identity=23.4782608695652, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI281363095, Length=230, Percent_Identity=23.4782608695652, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI221330119, Length=230, Percent_Identity=23.4782608695652, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI281363097, Length=230, Percent_Identity=23.4782608695652, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR005821 - InterPro: IPR003091 - InterPro: IPR014710 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]
EC number: NA
Molecular weight: Translated: 30770; Mature: 30770
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSNKHWREQLYVMIFQSDTPAGRRFDGILLLIILASLVIVMLDSIDSVHRNYADVLAYI CCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWGFTIIFAGEYILRLYCSPKPLRYAFSFYGLVDLLAIVPGILALYYSDAQYLLIIRIIR HHHHHEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MLRIFRVLKLSPYLKQANYLMSALRGSKQKIVVFLVSVCTLVTVFGTLMYVIEGPEHGFT HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SIPKGIYWAIVTLTTVGFGDIVPKTPLGQVISSLVMITGYSIIAVPTGIFTAELANAMRG CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHCC EQLQHDCPVCQKKSHESGAAFCSRCGNQLFKKIE CHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDSNKHWREQLYVMIFQSDTPAGRRFDGILLLIILASLVIVMLDSIDSVHRNYADVLAYI CCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWGFTIIFAGEYILRLYCSPKPLRYAFSFYGLVDLLAIVPGILALYYSDAQYLLIIRIIR HHHHHEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MLRIFRVLKLSPYLKQANYLMSALRGSKQKIVVFLVSVCTLVTVFGTLMYVIEGPEHGFT HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SIPKGIYWAIVTLTTVGFGDIVPKTPLGQVISSLVMITGYSIIAVPTGIFTAELANAMRG CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHCC EQLQHDCPVCQKKSHESGAAFCSRCGNQLFKKIE CHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1522059 [H]