| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pyk [H]
Identifier: 77457821
GI number: 77457821
Start: 1780279
End: 1781694
Strand: Reverse
Name: pyk [H]
Synonym: Pfl01_1594
Alternate gene names: 77457821
Gene position: 1781694-1780279 (Counterclockwise)
Preceding gene: 77457822
Following gene: 77457820
Centisome position: 27.67
GC content: 64.05
Gene sequence:
>1416_bases ATGACGCCTGATAAAAAGGTCAAAATCCTCGCCACCCTCGGGCCTGCCGTCGACGGCATCGAAGACATCCGCGAGCTGGT CGAGGCCGGGGTCAATATCTTCCGCCTCAACTTCAGCCACGGCGACCACGCCGACCACGCCAAGCGCTATCAGTGGATCC GCGAAGTCGAGCGCCAGCTCAACTACCCGCTCGGGATCCTGATGGACCTGCAAGGGCCGAAGCTGCGGGTCGGCAAGTTC GCGGACGGCAAGGTTCAGTTGCATCGTGGTCAGGCCTTCCGCCTCGATCTGGATGCGACACCGGGCGACGAACGCCGGGT AAACCTGCCGCATCCGGAAATCATCGCGGCGCTGGAAGCCGGGATGGATCTGCTGCTGGATGACGGCAAACTGCGCCTGC GGGTCGTCACCAAATACTCCGACGCGATCGACACCACCGTGCTCAACGGCGGCGAACTGTCGGACCGCAAAGGCGTGAAC GTGCCGCAAGCGGTGCTCGACCTGAGCCCGCTGACCACCAAGGATCGTCGTGACCTGAGCTTCGGTCTGGAGCTGGGTGT GGACTGGGTCGCGCTGTCGTTCGTGCAGCGTCCGCAAGACATCCTCGAGGCCCGCGAACTGATCGGCGACAAGGCGTTCC TGATGGCGAAAATCGAGAAGCCGTCGGCGGTCGAGCAACTGCGCGAGATCGCCGAACTGAGCGACGCGATCATGGTGGCA CGCGGTGATCTGGGCGTGGAAGTGCCCGCCGAGAGCGTGCCGCAGATCCAGAAAAACATCATCACCACCTGCCGTCATCT CGGCAAACCGGTGGTGGTGGCGACGCAGATGCTCGAGTCGATGCGCTTCTCCCCGGCCCCGACCCGCGCCGAAGTCACCG ACGTCGCCAACGCCGTGGCCGAAGGTGCCGATGCGGTGATGCTGTCGGCGGAAACCGCGTCCGGCGAATACCCGCTGGAA GCCGTGCAGATGATGAGCAAGATCATCCGCCAGGTGGAGAACGGTCCGGACTACCAGACCCAACTCGACGTCAGCCGCCC GAAAGCCGAAGCGACCGTGTCCGATGCGATCAGCTGCGCAATCCGCCGGATCAGCAACGTGCTGCCGGTGGCGGTGCTGG TCAACTACAGCGAGTCCGGCGCATCGAGTCTGCGTGCGGCGCGGGAGCGGCCGAAAGCGCCGATCCTGAACCTGACGCCG AACCTGCAGACCGCCCGCCGGTTGAGCGTGGCGTGGGGCATTCATTCGGTGGTCAATGATCGCCTGCGTCAGGTGGATGA GGTGTGCTCGACCGCGCTGGAAATCGCTCAGGCGCAAGGAATGGCCGAGCGTGGCGATACGTTGCTGATCACCGCGGGTG TGCCGTTCGGGCAGCCGGGGTCGACTAATTCGCTGCGGATCGAAACATTGATTTAA
Upstream 100 bases:
>100_bases ACGGCTACTTCGCGGCGCTCGATGCGCTGATCGTCACCGAGCCGACTCGCACCAACGTCAACGACTTCCGCGCCATCCTG ATCCTCGAGAGCTCTAAATC
Downstream 100 bases:
>100_bases GCAACACCTGTGTGGCGAGGGAGCGTGCTCCCGTCGCCCGGCATGACGGTTTCCACAAGAGACGCCGCATGCACCGGGCA CGAGCTCCCTCGCCACCGTT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MTPDKKVKILATLGPAVDGIEDIRELVEAGVNIFRLNFSHGDHADHAKRYQWIREVERQLNYPLGILMDLQGPKLRVGKF ADGKVQLHRGQAFRLDLDATPGDERRVNLPHPEIIAALEAGMDLLLDDGKLRLRVVTKYSDAIDTTVLNGGELSDRKGVN VPQAVLDLSPLTTKDRRDLSFGLELGVDWVALSFVQRPQDILEARELIGDKAFLMAKIEKPSAVEQLREIAELSDAIMVA RGDLGVEVPAESVPQIQKNIITTCRHLGKPVVVATQMLESMRFSPAPTRAEVTDVANAVAEGADAVMLSAETASGEYPLE AVQMMSKIIRQVENGPDYQTQLDVSRPKAEATVSDAISCAIRRISNVLPVAVLVNYSESGASSLRAARERPKAPILNLTP NLQTARRLSVAWGIHSVVNDRLRQVDEVCSTALEIAQAQGMAERGDTLLITAGVPFGQPGSTNSLRIETLI
Sequences:
>Translated_471_residues MTPDKKVKILATLGPAVDGIEDIRELVEAGVNIFRLNFSHGDHADHAKRYQWIREVERQLNYPLGILMDLQGPKLRVGKF ADGKVQLHRGQAFRLDLDATPGDERRVNLPHPEIIAALEAGMDLLLDDGKLRLRVVTKYSDAIDTTVLNGGELSDRKGVN VPQAVLDLSPLTTKDRRDLSFGLELGVDWVALSFVQRPQDILEARELIGDKAFLMAKIEKPSAVEQLREIAELSDAIMVA RGDLGVEVPAESVPQIQKNIITTCRHLGKPVVVATQMLESMRFSPAPTRAEVTDVANAVAEGADAVMLSAETASGEYPLE AVQMMSKIIRQVENGPDYQTQLDVSRPKAEATVSDAISCAIRRISNVLPVAVLVNYSESGASSLRAARERPKAPILNLTP NLQTARRLSVAWGIHSVVNDRLRQVDEVCSTALEIAQAQGMAERGDTLLITAGVPFGQPGSTNSLRIETLI >Mature_470_residues TPDKKVKILATLGPAVDGIEDIRELVEAGVNIFRLNFSHGDHADHAKRYQWIREVERQLNYPLGILMDLQGPKLRVGKFA DGKVQLHRGQAFRLDLDATPGDERRVNLPHPEIIAALEAGMDLLLDDGKLRLRVVTKYSDAIDTTVLNGGELSDRKGVNV PQAVLDLSPLTTKDRRDLSFGLELGVDWVALSFVQRPQDILEARELIGDKAFLMAKIEKPSAVEQLREIAELSDAIMVAR GDLGVEVPAESVPQIQKNIITTCRHLGKPVVVATQMLESMRFSPAPTRAEVTDVANAVAEGADAVMLSAETASGEYPLEA VQMMSKIIRQVENGPDYQTQLDVSRPKAEATVSDAISCAIRRISNVLPVAVLVNYSESGASSLRAARERPKAPILNLTPN LQTARRLSVAWGIHSVVNDRLRQVDEVCSTALEIAQAQGMAERGDTLLITAGVPFGQPGSTNSLRIETLI
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=484, Percent_Identity=38.8429752066116, Blast_Score=315, Evalue=8e-86, Organism=Homo sapiens, GI33286420, Length=484, Percent_Identity=38.8429752066116, Blast_Score=315, Evalue=8e-86, Organism=Homo sapiens, GI33286418, Length=490, Percent_Identity=38.7755102040816, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI32967597, Length=495, Percent_Identity=37.3737373737374, Blast_Score=290, Evalue=3e-78, Organism=Homo sapiens, GI10835121, Length=495, Percent_Identity=37.3737373737374, Blast_Score=289, Evalue=3e-78, Organism=Homo sapiens, GI310128732, Length=283, Percent_Identity=38.86925795053, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI310128730, Length=283, Percent_Identity=38.86925795053, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI310128736, Length=231, Percent_Identity=34.6320346320346, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI310128734, Length=231, Percent_Identity=34.6320346320346, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=34.1121495327103, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1787965, Length=474, Percent_Identity=36.7088607594937, Blast_Score=299, Evalue=3e-82, Organism=Escherichia coli, GI1788160, Length=478, Percent_Identity=37.6569037656904, Blast_Score=281, Evalue=5e-77, Organism=Caenorhabditis elegans, GI17544584, Length=488, Percent_Identity=36.0655737704918, Blast_Score=305, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17506829, Length=484, Percent_Identity=36.3636363636364, Blast_Score=283, Evalue=2e-76, Organism=Caenorhabditis elegans, GI71984406, Length=484, Percent_Identity=36.3636363636364, Blast_Score=282, Evalue=2e-76, Organism=Caenorhabditis elegans, GI71984413, Length=484, Percent_Identity=36.3636363636364, Blast_Score=282, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17506831, Length=484, Percent_Identity=36.3636363636364, Blast_Score=282, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6319279, Length=484, Percent_Identity=34.0909090909091, Blast_Score=253, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6324923, Length=484, Percent_Identity=33.6776859504132, Blast_Score=253, Evalue=6e-68, Organism=Drosophila melanogaster, GI24648964, Length=484, Percent_Identity=36.1570247933884, Blast_Score=288, Evalue=6e-78, Organism=Drosophila melanogaster, GI28571814, Length=484, Percent_Identity=36.1570247933884, Blast_Score=288, Evalue=6e-78, Organism=Drosophila melanogaster, GI24581235, Length=481, Percent_Identity=30.7692307692308, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24648966, Length=404, Percent_Identity=35.3960396039604, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24646914, Length=255, Percent_Identity=38.0392156862745, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51384; Mature: 51252
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDKKVKILATLGPAVDGIEDIRELVEAGVNIFRLNFSHGDHADHAKRYQWIREVERQL CCCCCCEEEEEECCCHHCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH NYPLGILMDLQGPKLRVGKFADGKVQLHRGQAFRLDLDATPGDERRVNLPHPEIIAALEA CCCEEEEEECCCCCEEECCCCCCEEEEECCCEEEEEECCCCCCCCEECCCCHHHHHHHHH GMDLLLDDGKLRLRVVTKYSDAIDTTVLNGGELSDRKGVNVPQAVLDLSPLTTKDRRDLS CCEEEEECCCEEEEEEEEHHHHHHHEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHH FGLELGVDWVALSFVQRPQDILEARELIGDKAFLMAKIEKPSAVEQLREIAELSDAIMVA HHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEE RGDLGVEVPAESVPQIQKNIITTCRHLGKPVVVATQMLESMRFSPAPTRAEVTDVANAVA ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EGADAVMLSAETASGEYPLEAVQMMSKIIRQVENGPDYQTQLDVSRPKAEATVSDAISCA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH IRRISNVLPVAVLVNYSESGASSLRAARERPKAPILNLTPNLQTARRLSVAWGIHSVVND HHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH RLRQVDEVCSTALEIAQAQGMAERGDTLLITAGVPFGQPGSTNSLRIETLI HHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure TPDKKVKILATLGPAVDGIEDIRELVEAGVNIFRLNFSHGDHADHAKRYQWIREVERQL CCCCCEEEEEECCCHHCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH NYPLGILMDLQGPKLRVGKFADGKVQLHRGQAFRLDLDATPGDERRVNLPHPEIIAALEA CCCEEEEEECCCCCEEECCCCCCEEEEECCCEEEEEECCCCCCCCEECCCCHHHHHHHHH GMDLLLDDGKLRLRVVTKYSDAIDTTVLNGGELSDRKGVNVPQAVLDLSPLTTKDRRDLS CCEEEEECCCEEEEEEEEHHHHHHHEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHH FGLELGVDWVALSFVQRPQDILEARELIGDKAFLMAKIEKPSAVEQLREIAELSDAIMVA HHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEE RGDLGVEVPAESVPQIQKNIITTCRHLGKPVVVATQMLESMRFSPAPTRAEVTDVANAVA ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EGADAVMLSAETASGEYPLEAVQMMSKIIRQVENGPDYQTQLDVSRPKAEATVSDAISCA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH IRRISNVLPVAVLVNYSESGASSLRAARERPKAPILNLTPNLQTARRLSVAWGIHSVVND HHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH RLRQVDEVCSTALEIAQAQGMAERGDTLLITAGVPFGQPGSTNSLRIETLI HHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA