Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ycbL [C]

Identifier: 77457680

GI number: 77457680

Start: 1624230

End: 1624955

Strand: Reverse

Name: ycbL [C]

Synonym: Pfl01_1453

Alternate gene names: 77457680

Gene position: 1624955-1624230 (Counterclockwise)

Preceding gene: 77457681

Following gene: 77457679

Centisome position: 25.24

GC content: 61.16

Gene sequence:

>726_bases
ATGAAGATTGTTTCTCGCGATCAGTGGTTCGAAGTGCAAACCCTGAGCAACGGCATTCGGCTGATTCACGAGCCGTTCAT
CCGCCCGTTCTACCGCTGCAACCTGTGGCACGTTCAGGGGCGGGACAAGGATTTGCTGCTCGACAGCGGTTCCGGACTGG
TCAGCCTGCGCGAGCAACTGCCGTGGCTGACCGAACGGCCGCTGGTGGCAGTAGCCAGTCATTGCCATTTCGATCACATT
GCCGGACATCACGAATTTGCCGAACGGCTGGTACATCCGGCCGAGGCGGACATTCTGGCGGCGCCGGATGGTGAGAATGA
TCTGAGCCGGGCCTTCGTCGGCGACGACATGTTCGAAGCGCACCCGGATTGCCCGTTGTGCTACGCCGAATACCGGGTCA
AGGCGGCGCCGGCCACCGGGTTTGTCGAGGATGGCGATGTGCTGGACCTGGGCAACCGCACGTTGCAGGTGCTGCACACG
CCGGGGCATTCACCGGGCGGGATCAGCCTTTACGAAGCGGCCACAGAGACACTGTTCAGTGGTGACATCATCTACGACGG
GCCGTTGATCGAAGACGCCTACCACTCGAATCTTGAAGATTACGCCGCCAGCCTGCGTCGCTTGCAGGCTCTGAAGATTC
GCACGGTGCATGGCGGGCACTTCGGCAGTTTTTCCGGAGAGCATCTGCGCGGGATGATTGACGAATGGCTGCGCCGGCAC
GCCTGA

Upstream 100 bases:

>100_bases
GGCCAGCGCGATCTAAGCTGAACAAAACGACTTGATGCTTTCTTCGGCGGGTGTGGCGTCGGTTGCCACACCCGTTTTTT
TCGTCTGGAGAAAATGCTTG

Downstream 100 bases:

>100_bases
GGCCTGCTGTACTTCAGTCAGACTAACGACACAAAGATCTGCCATGAGAAGAGCTGCCGTACGTGCTGCCGTGCACCGGT
TCATCCTGCGCCTGCTGGAA

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Zinc-Dependent Hydrolase; Beta-Lactamase-Like Protein; Beta-Lactamase; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase-Like; Metallo-Beta-Lactamase Domain Protein

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKIVSRDQWFEVQTLSNGIRLIHEPFIRPFYRCNLWHVQGRDKDLLLDSGSGLVSLREQLPWLTERPLVAVASHCHFDHI
AGHHEFAERLVHPAEADILAAPDGENDLSRAFVGDDMFEAHPDCPLCYAEYRVKAAPATGFVEDGDVLDLGNRTLQVLHT
PGHSPGGISLYEAATETLFSGDIIYDGPLIEDAYHSNLEDYAASLRRLQALKIRTVHGGHFGSFSGEHLRGMIDEWLRRH
A

Sequences:

>Translated_241_residues
MKIVSRDQWFEVQTLSNGIRLIHEPFIRPFYRCNLWHVQGRDKDLLLDSGSGLVSLREQLPWLTERPLVAVASHCHFDHI
AGHHEFAERLVHPAEADILAAPDGENDLSRAFVGDDMFEAHPDCPLCYAEYRVKAAPATGFVEDGDVLDLGNRTLQVLHT
PGHSPGGISLYEAATETLFSGDIIYDGPLIEDAYHSNLEDYAASLRRLQALKIRTVHGGHFGSFSGEHLRGMIDEWLRRH
A
>Mature_241_residues
MKIVSRDQWFEVQTLSNGIRLIHEPFIRPFYRCNLWHVQGRDKDLLLDSGSGLVSLREQLPWLTERPLVAVASHCHFDHI
AGHHEFAERLVHPAEADILAAPDGENDLSRAFVGDDMFEAHPDCPLCYAEYRVKAAPATGFVEDGDVLDLGNRTLQVLHT
PGHSPGGISLYEAATETLFSGDIIYDGPLIEDAYHSNLEDYAASLRRLQALKIRTVHGGHFGSFSGEHLRGMIDEWLRRH
A

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42822880, Length=248, Percent_Identity=35.8870967741936, Blast_Score=150, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27056; Mature: 27056

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVSRDQWFEVQTLSNGIRLIHEPFIRPFYRCNLWHVQGRDKDLLLDSGSGLVSLREQL
CCCCCCCCCEEHHHHHHHHHHHHHHHHCHHHHCEEEEECCCCCEEEEECCCCCHHHHHHC
PWLTERPLVAVASHCHFDHIAGHHEFAERLVHPAEADILAAPDGENDLSRAFVGDDMFEA
CCCCCCCHHHHHHHCCHHHHCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCCHHHC
HPDCPLCYAEYRVKAAPATGFVEDGDVLDLGNRTLQVLHTPGHSPGGISLYEAATETLFS
CCCCCEEHHHEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
GDIIYDGPLIEDAYHSNLEDYAASLRRLQALKIRTVHGGHFGSFSGEHLRGMIDEWLRRH
CCEEECCCCCCHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure
MKIVSRDQWFEVQTLSNGIRLIHEPFIRPFYRCNLWHVQGRDKDLLLDSGSGLVSLREQL
CCCCCCCCCEEHHHHHHHHHHHHHHHHCHHHHCEEEEECCCCCEEEEECCCCCHHHHHHC
PWLTERPLVAVASHCHFDHIAGHHEFAERLVHPAEADILAAPDGENDLSRAFVGDDMFEA
CCCCCCCHHHHHHHCCHHHHCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCCHHHC
HPDCPLCYAEYRVKAAPATGFVEDGDVLDLGNRTLQVLHTPGHSPGGISLYEAATETLFS
CCCCCEEHHHEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
GDIIYDGPLIEDAYHSNLEDYAASLRRLQALKIRTVHGGHFGSFSGEHLRGMIDEWLRRH
CCEEECCCCCCHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA