| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457625
Identifier: 77457625
GI number: 77457625
Start: 1569617
End: 1570090
Strand: Reverse
Name: 77457625
Synonym: Pfl01_1398
Alternate gene names: NA
Gene position: 1570090-1569617 (Counterclockwise)
Preceding gene: 77457626
Following gene: 77457624
Centisome position: 24.39
GC content: 62.24
Gene sequence:
>474_bases ATGTCAGAACCAACCCTACTGAACAACGAAATTCGCGACTGGCTGATGGACTGCGGCCTGTTCGATCAATTGCAGCTGGC GGATTTTGCCGCCGCTTCGGGCTACTTCAGCATCAGTACCGTGGCTGAAGGCGAAGCGATCTTTCGCGAAGGCGATGCCG GCAGTTTCATGTGCATCATCCACACCGGCCAGGTGGCCGTGCAGAAAACCGGCGGCGACGGTCAGGTCGTGACCATGGCC ACCCTGCGCAGCGGCCGGGCGTTCGGCGAAATGGCCGTACTCGACGGCGAACGCCGCTCGGCGACCTGCGTGGCGGCGAG CAACTGTCAGTTGCTCAACCTCGGCAAGGATTCGCTGGAAAAAATGCTCAACGATGCGCCGAAGATCGCCGCCAAAATCA TCCGCGCCCTCGCCGTCTCCCTCTCCAAACGCCTGCGCATGGCCGACGGCCAGCTCGCCGCCCAGCAGATCTAG
Upstream 100 bases:
>100_bases GCCGGTCAGTCAGGTCTTAATTCCGGGCACCGGGAGCCGATAAGCAGATCGGCCCCCGGTGGCGAGCCTGCCACCCGACA CAACAAAAAGATTGCATGAC
Downstream 100 bases:
>100_bases CCTCCCGGGGATTTGGGTTTGCTGTCGTTCTGTTCCAGGCCCGGCAATGGCTGATCCTTGGTCGGCGGGCTGGGCATTTC GATCGGCACCAGCGGCGGGC
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; Histidine Kinase; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator Crp
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSEPTLLNNEIRDWLMDCGLFDQLQLADFAAASGYFSISTVAEGEAIFREGDAGSFMCIIHTGQVAVQKTGGDGQVVTMA TLRSGRAFGEMAVLDGERRSATCVAASNCQLLNLGKDSLEKMLNDAPKIAAKIIRALAVSLSKRLRMADGQLAAQQI
Sequences:
>Translated_157_residues MSEPTLLNNEIRDWLMDCGLFDQLQLADFAAASGYFSISTVAEGEAIFREGDAGSFMCIIHTGQVAVQKTGGDGQVVTMA TLRSGRAFGEMAVLDGERRSATCVAASNCQLLNLGKDSLEKMLNDAPKIAAKIIRALAVSLSKRLRMADGQLAAQQI >Mature_156_residues SEPTLLNNEIRDWLMDCGLFDQLQLADFAAASGYFSISTVAEGEAIFREGDAGSFMCIIHTGQVAVQKTGGDGQVVTMAT LRSGRAFGEMAVLDGERRSATCVAASNCQLLNLGKDSLEKMLNDAPKIAAKIIRALAVSLSKRLRMADGQLAAQQI
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16758; Mature: 16627
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTLLNNEIRDWLMDCGLFDQLQLADFAAASGYFSISTVAEGEAIFREGDAGSFMCII CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCEEEEE HTGQVAVQKTGGDGQVVTMATLRSGRAFGEMAVLDGERRSATCVAASNCQLLNLGKDSLE ECCEEEEEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCEEEECCHHHHH KMLNDAPKIAAKIIRALAVSLSKRLRMADGQLAAQQI HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure SEPTLLNNEIRDWLMDCGLFDQLQLADFAAASGYFSISTVAEGEAIFREGDAGSFMCII CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCEEEEE HTGQVAVQKTGGDGQVVTMATLRSGRAFGEMAVLDGERRSATCVAASNCQLLNLGKDSLE ECCEEEEEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCEEEECCHHHHH KMLNDAPKIAAKIIRALAVSLSKRLRMADGQLAAQQI HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA