Click here to switch to the map view.

The map label for this gene is 77457624

Identifier: 77457624

GI number: 77457624

Start: 1568570

End: 1569256

Strand: Reverse

Name: 77457624

Synonym: Pfl01_1397

Alternate gene names: NA

Gene position: 1569256-1568570 (Counterclockwise)

Preceding gene: 77457625

Following gene: 77457623

Centisome position: 24.37

GC content: 64.19

Gene sequence:

>687_bases
ATGAAACGTTTCGTTCTGCTCGACACCACGCCGATCCCTGACAACGGCGGCGCCCTGTGCCTGTTCGAGTATGGCGAGGA
TTTCGTCATCAAGATCCAGGGCGGCGACGGCGGCCAATTGATGAACACCCGCATGCACGGCTCCGAAGACGCGCTGGCAG
AGATCCCGTGCCGCAAGGTCGCCGGCCGGCCGAATTCGCGGGTACTGATCGGCGGTCTGGGCATGGGCTTCACCCTCGCC
TCGGCGCTCAAGCATCTGGGCAAGAGTGCTGAAGTAGTGGTCGCCGAACTGGTGCCCGGGGTGGTCGAGTGGAACCGTGG
CCCGCTCGGTGAAAAGTCCGGACGTCCGTTGCTCGACCCGCGCACGGTGATCCGTCAGGAAGACGTGGCCAAGGTGCTGC
AAAGCGAGCCGAACGGCTTCGACGCGATCATGCTCGACGTCGACAACGGCCCCGAAGGCCTGACCCAGAAGGCCAACAGT
TGGCTGTATTCCGCCGCCGGTCTTGCCGCGTGCGCCAAGGCCATGCGGCCCAAAGGCGTGCTCGCGGTGTGGTCGGCCAG
CGCCGACCGGCAGTTTTCCGACAAATTGAAGAAGGCCGGTTTCAAGGCCGAGGAAGTCCAGGTCTTCGCCCACGGCAACA
AGGGCACGCGCCACACGATCTGGATTGCCGAGAAGCTCAAGGGCTGA

Upstream 100 bases:

>100_bases
CGTTAGAATGGTGCGCTTCATCAAGGGCTCCGTTGGCCTGAAGTCTGCCTTCAGGCTACTCCCAACGCGCCGGCTTGCCT
TCCCCCCTGTAGAGATTTCC

Downstream 100 bases:

>100_bases
GCTAAACTTGCCCCATAACCGTCATTAGTCTTCTGCAAAGGTGAACCCATGAGTTCGTCCACCCCGACCAACACTTCGAA
GCTGGATCGCATCCTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKRFVLLDTTPIPDNGGALCLFEYGEDFVIKIQGGDGGQLMNTRMHGSEDALAEIPCRKVAGRPNSRVLIGGLGMGFTLA
SALKHLGKSAEVVVAELVPGVVEWNRGPLGEKSGRPLLDPRTVIRQEDVAKVLQSEPNGFDAIMLDVDNGPEGLTQKANS
WLYSAAGLAACAKAMRPKGVLAVWSASADRQFSDKLKKAGFKAEEVQVFAHGNKGTRHTIWIAEKLKG

Sequences:

>Translated_228_residues
MKRFVLLDTTPIPDNGGALCLFEYGEDFVIKIQGGDGGQLMNTRMHGSEDALAEIPCRKVAGRPNSRVLIGGLGMGFTLA
SALKHLGKSAEVVVAELVPGVVEWNRGPLGEKSGRPLLDPRTVIRQEDVAKVLQSEPNGFDAIMLDVDNGPEGLTQKANS
WLYSAAGLAACAKAMRPKGVLAVWSASADRQFSDKLKKAGFKAEEVQVFAHGNKGTRHTIWIAEKLKG
>Mature_228_residues
MKRFVLLDTTPIPDNGGALCLFEYGEDFVIKIQGGDGGQLMNTRMHGSEDALAEIPCRKVAGRPNSRVLIGGLGMGFTLA
SALKHLGKSAEVVVAELVPGVVEWNRGPLGEKSGRPLLDPRTVIRQEDVAKVLQSEPNGFDAIMLDVDNGPEGLTQKANS
WLYSAAGLAACAKAMRPKGVLAVWSASADRQFSDKLKKAGFKAEEVQVFAHGNKGTRHTIWIAEKLKG

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24450; Mature: 24450

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFVLLDTTPIPDNGGALCLFEYGEDFVIKIQGGDGGQLMNTRMHGSEDALAEIPCRKV
CCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCHHHHCCHHHH
AGRPNSRVLIGGLGMGFTLASALKHLGKSAEVVVAELVPGVVEWNRGPLGEKSGRPLLDP
CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEHHHHHCCHHEECCCCCCCCCCCCCCCCH
RTVIRQEDVAKVLQSEPNGFDAIMLDVDNGPEGLTQKANSWLYSAAGLAACAKAMRPKGV
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LAVWSASADRQFSDKLKKAGFKAEEVQVFAHGNKGTRHTIWIAEKLKG
EEEEECCCCHHHHHHHHHCCCCHHHEEEEEECCCCCEEEEEEEEECCC
>Mature Secondary Structure
MKRFVLLDTTPIPDNGGALCLFEYGEDFVIKIQGGDGGQLMNTRMHGSEDALAEIPCRKV
CCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCHHHHCCHHHH
AGRPNSRVLIGGLGMGFTLASALKHLGKSAEVVVAELVPGVVEWNRGPLGEKSGRPLLDP
CCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEHHHHHCCHHEECCCCCCCCCCCCCCCCH
RTVIRQEDVAKVLQSEPNGFDAIMLDVDNGPEGLTQKANSWLYSAAGLAACAKAMRPKGV
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LAVWSASADRQFSDKLKKAGFKAEEVQVFAHGNKGTRHTIWIAEKLKG
EEEEECCCCHHHHHHHHHCCCCHHHEEEEEECCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA