Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ydhP [H]

Identifier: 77457510

GI number: 77457510

Start: 1459558

End: 1460721

Strand: Reverse

Name: ydhP [H]

Synonym: Pfl01_1283

Alternate gene names: 77457510

Gene position: 1460721-1459558 (Counterclockwise)

Preceding gene: 77457511

Following gene: 77457509

Centisome position: 22.69

GC content: 65.72

Gene sequence:

>1164_bases
ATGCCCCTCTCGCTTCTCATACTCGCCTTGAGCGCCTTCGCCATCGGCACCACCGAGTTCGTCATCATGGGCCTGCTGCC
CAATGTGGCGGCTGACCTCGGTGTGTCGATTCCCGGTGCCGGCTGGCTGGTGACCGGCTACGCCCTGGGCGTGGCGATTG
GTGCACCGTTCATGGCAATGGCCACTGCAAAACTGCCGCGCAAGGCTGCACTGGTAACGCTGATGGGCATTTTCATTATC
GGCAACCTGCTCTGCGCCATCGCCACTGACTACAACGTGCTGATGTTCGCCCGAGTGGTTACCGCCCTGTGTCACGGCGC
GTTCTTCGGCATCGGTTCGGTGGTCGCGGCCAACCTGGTGGCGCCGAACAAACGCGCCTCGGCCGTGGCCCTGATGTTCA
CCGGCCTGACCCTGGCCAACGTGCTGGGCGTACCGCTGGGCACCGCGCTCGGTCAGGAAGCCGGCTGGCGCTCGACCTTC
TGGGCAGTGACCGTGATCGGTGTGATCGCGCTGATCGGACTGATCCGCTTCCTGCCGGCCAAGCGTGACGAAGAAAAACT
CGACATGCGCGCCGAACTGGCCGCGCTCAAGGGCGCCGGGATCTGGCTGTCGCTGAGCATGACCGCGCTGTTCGCCGCCT
CGGTGTTCACGTTGTTCACCTACGTCGCACCGCTGCTGGGCGATGTCACCGGTGTTTCGCCCCGTGGCGTGACCTGGACC
CTGATGCTCATCGGCCTGGGCCTGACTGTCGGCAACATCATCGGCGGCAAACTGGCCGACAAGGGCCTGGCCGCGACGCT
GATCGGCGTGTTCATCGCCATGGCCGTGACCTCCACCGTCCTGACCTGGACCAGCATCGCGCTGATCCCGACCGAGATCA
CCCTGTTCCTCTGGGCCACCGCGTGTTTCGCCGCGGTGCCGGCCCTGCAAGTGAACGTCGTGACCTACGGCCAGGCCGCA
CCGAACCTGGTGTCGACCCTGAACATCGGCGCCTTCAACGTCGGCAATGCCCTCGGCGCCTGGGTCGGCGGCAGCGTCAT
CGCCCACGGCTACGGCCTGACCAGCGTGCCTCTCGCCGCTGCAGCGCTGGCGGTTCTCGCGCTGCTGGTGACCCTGATCA
CATTCCGCCAGAACGGCAATCCCGAGCTGGCCACCGCTAACTGA

Upstream 100 bases:

>100_bases
GCACTTTTTCAAACGCAACGAGGACGTGATCCAGGCGTTCCTCAGCACCCTCAGCAAAGAGCTCTGACCCTTAACGTCAG
CCAGCCAAAAGGATCCAACG

Downstream 100 bases:

>100_bases
TTCACTCACTTACCTCACGAGGGTTGTATCTCATGGCAACAATTTTCGATCCGATCAAACTGGGCGACCTCGAGCTGTCC
AACCGCATCATCATGGCGCC

Product: general substrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MPLSLLILALSAFAIGTTEFVIMGLLPNVAADLGVSIPGAGWLVTGYALGVAIGAPFMAMATAKLPRKAALVTLMGIFII
GNLLCAIATDYNVLMFARVVTALCHGAFFGIGSVVAANLVAPNKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTF
WAVTVIGVIALIGLIRFLPAKRDEEKLDMRAELAALKGAGIWLSLSMTALFAASVFTLFTYVAPLLGDVTGVSPRGVTWT
LMLIGLGLTVGNIIGGKLADKGLAATLIGVFIAMAVTSTVLTWTSIALIPTEITLFLWATACFAAVPALQVNVVTYGQAA
PNLVSTLNIGAFNVGNALGAWVGGSVIAHGYGLTSVPLAAAALAVLALLVTLITFRQNGNPELATAN

Sequences:

>Translated_387_residues
MPLSLLILALSAFAIGTTEFVIMGLLPNVAADLGVSIPGAGWLVTGYALGVAIGAPFMAMATAKLPRKAALVTLMGIFII
GNLLCAIATDYNVLMFARVVTALCHGAFFGIGSVVAANLVAPNKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTF
WAVTVIGVIALIGLIRFLPAKRDEEKLDMRAELAALKGAGIWLSLSMTALFAASVFTLFTYVAPLLGDVTGVSPRGVTWT
LMLIGLGLTVGNIIGGKLADKGLAATLIGVFIAMAVTSTVLTWTSIALIPTEITLFLWATACFAAVPALQVNVVTYGQAA
PNLVSTLNIGAFNVGNALGAWVGGSVIAHGYGLTSVPLAAAALAVLALLVTLITFRQNGNPELATAN
>Mature_386_residues
PLSLLILALSAFAIGTTEFVIMGLLPNVAADLGVSIPGAGWLVTGYALGVAIGAPFMAMATAKLPRKAALVTLMGIFIIG
NLLCAIATDYNVLMFARVVTALCHGAFFGIGSVVAANLVAPNKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFW
AVTVIGVIALIGLIRFLPAKRDEEKLDMRAELAALKGAGIWLSLSMTALFAASVFTLFTYVAPLLGDVTGVSPRGVTWTL
MLIGLGLTVGNIIGGKLADKGLAATLIGVFIAMAVTSTVLTWTSIALIPTEITLFLWATACFAAVPALQVNVVTYGQAAP
NLVSTLNIGAFNVGNALGAWVGGSVIAHGYGLTSVPLAAAALAVLALLVTLITFRQNGNPELATAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=378, Percent_Identity=46.5608465608466, Blast_Score=284, Evalue=8e-78,
Organism=Escherichia coli, GI1786595, Length=379, Percent_Identity=33.245382585752, Blast_Score=207, Evalue=9e-55,
Organism=Escherichia coli, GI1787808, Length=376, Percent_Identity=29.7872340425532, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI145693198, Length=356, Percent_Identity=26.685393258427, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081723, Length=229, Percent_Identity=28.3842794759825, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39623; Mature: 39492

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSLLILALSAFAIGTTEFVIMGLLPNVAADLGVSIPGAGWLVTGYALGVAIGAPFMAM
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHH
ATAKLPRKAALVTLMGIFIIGNLLCAIATDYNVLMFARVVTALCHGAFFGIGSVVAANLV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVIALIGLIRFLPA
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
KRDEEKLDMRAELAALKGAGIWLSLSMTALFAASVFTLFTYVAPLLGDVTGVSPRGVTWT
CCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LMLIGLGLTVGNIIGGKLADKGLAATLIGVFIAMAVTSTVLTWTSIALIPTEITLFLWAT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACFAAVPALQVNVVTYGQAAPNLVSTLNIGAFNVGNALGAWVGGSVIAHGYGLTSVPLAA
HHHHHCCHHEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHCCHHHHCCCCCHHHHHHH
AALAVLALLVTLITFRQNGNPELATAN
HHHHHHHHHHHHHHHHCCCCCCCEECC
>Mature Secondary Structure 
PLSLLILALSAFAIGTTEFVIMGLLPNVAADLGVSIPGAGWLVTGYALGVAIGAPFMAM
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHH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HHHHHHHHHHHHHHHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]