Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77457485

Identifier: 77457485

GI number: 77457485

Start: 1432791

End: 1433261

Strand: Reverse

Name: 77457485

Synonym: Pfl01_1258

Alternate gene names: NA

Gene position: 1433261-1432791 (Counterclockwise)

Preceding gene: 77457486

Following gene: 77457484

Centisome position: 22.26

GC content: 62.85

Gene sequence:

>471_bases
ATGACCGATTCCCTCAGCCAACGTGTGCAACAACTCGGCCTGCGCCTGCCCGAACCGAGCCAACCGATCGCCAATTACGT
CAACCATGTGGTCAGCCAGAATCAGCTGTTCATCTCCGGGCAGATTCCATTGCTCGACGGCAAACCTGTCTTCATTGGGC
GACTGGGCGAAGCGATCTCCGACGAAGAAGGCATTAAAGCCGCTGAACTGGCTGCCCTGGGACTGCTCGCCCAGTTGAGC
CATGCGCTGGGCGATGACCTGTCGAAACTGGTGCGCATCCTGCGCCTCGGGGTTTTCGTCGCCGCCACACCGGACTTCAA
GGCTCAGGGCGTCGTCGCCAACGGGGCCTCGAATCTGCTGGTCAACGTCCTCGGCGACAAGGGCCGGCACGTGCGCACCG
CGGTCGGCGTGTCGAGTCTGCCGGCGGGCGTCGCGGTCGAGATCGACGCAATCTTCGAGCTCAAGCCGTGA

Upstream 100 bases:

>100_bases
GCGAACGCATGAGTTTTTTGGATGCGTCGAATTAAATCTATCCGTTTGTCGCCCTTTCCTCGCCACAACATGCTGAAGCC
CTCACTCAGGAGGACTTCCC

Downstream 100 bases:

>100_bases
ACATCGATGACCTCTCGCGTCTGCGCGCAGCCACACCCGGCTGCGCTCAGGTGGTCCACTTCAACCACGCCGGCGCTTCG
TTGCCGAGTCAGGCCACCCT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Endoribonuclease; Translation Initiation Inhibitor Protein; Transcriptional Regulator; Translation Initiation Inhibitor YjgF Family; L-PSP Family Endoribonuclease; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTDSLSQRVQQLGLRLPEPSQPIANYVNHVVSQNQLFISGQIPLLDGKPVFIGRLGEAISDEEGIKAAELAALGLLAQLS
HALGDDLSKLVRILRLGVFVAATPDFKAQGVVANGASNLLVNVLGDKGRHVRTAVGVSSLPAGVAVEIDAIFELKP

Sequences:

>Translated_156_residues
MTDSLSQRVQQLGLRLPEPSQPIANYVNHVVSQNQLFISGQIPLLDGKPVFIGRLGEAISDEEGIKAAELAALGLLAQLS
HALGDDLSKLVRILRLGVFVAATPDFKAQGVVANGASNLLVNVLGDKGRHVRTAVGVSSLPAGVAVEIDAIFELKP
>Mature_155_residues
TDSLSQRVQQLGLRLPEPSQPIANYVNHVVSQNQLFISGQIPLLDGKPVFIGRLGEAISDEEGIKAAELAALGLLAQLSH
ALGDDLSKLVRILRLGVFVAATPDFKAQGVVANGASNLLVNVLGDKGRHVRTAVGVSSLPAGVAVEIDAIFELKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16393; Mature: 16262

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSLSQRVQQLGLRLPEPSQPIANYVNHVVSQNQLFISGQIPLLDGKPVFIGRLGEAIS
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEHHCCCCC
DEEGIKAAELAALGLLAQLSHALGDDLSKLVRILRLGVFVAATPDFKAQGVVANGASNLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCHHH
VNVLGDKGRHVRTAVGVSSLPAGVAVEIDAIFELKP
HEECCCCCCEEEHHHCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
TDSLSQRVQQLGLRLPEPSQPIANYVNHVVSQNQLFISGQIPLLDGKPVFIGRLGEAIS
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEHHCCCCC
DEEGIKAAELAALGLLAQLSHALGDDLSKLVRILRLGVFVAATPDFKAQGVVANGASNLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCHHH
VNVLGDKGRHVRTAVGVSSLPAGVAVEIDAIFELKP
HEECCCCCCEEEHHHCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA