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The map label for this gene is 77457420

Identifier: 77457420

GI number: 77457420

Start: 1361492

End: 1362787

Strand: Reverse

Name: 77457420

Synonym: Pfl01_1193

Alternate gene names: NA

Gene position: 1362787-1361492 (Counterclockwise)

Preceding gene: 77457421

Following gene: 77457418

Centisome position: 21.17

GC content: 65.28

Gene sequence:

>1296_bases
ATGATTCAACGCTCCCTGAAGTACATCCTGGTCGCACTGCTGGTGCTGGCCGCGATTGCCGGTGGCGGTTTCTGGTACCT
CAAACGCCCGGCACCGGAACCGACCCTCGAACAGCTCACTCCGGCCGATGGCGCTGCCATGACCCGGGTCATCCCCGGTA
CCAAGCCCAAGGCGCAGGTGCTGGTGGCGGTCAACGACGACCAGAAACTCAGCGACAAGCAACTGAGCACTCTGAGCCGC
AGCGCTTCGGCGCAGATCGTTCAGGTGATCCTGCCCAAGGACTGCCTGCTGCAAAGCCGCGCCCTGCAGGCCGGCCTGCG
CGAACTGAACGGCCCAGCGACCCTGGTCAGCGGCATCGGCCCCGGCGCCGTCCTGGCGTGGCGCTGGCTGTCCGAGCAGA
AAGACGACAAGGCACAGGCCGTCTCCGTCGACCTGGCCCTGGAAAAACCCGGCTGCACTCACCTGCTGCCGAAAGCCGCC
GCCCACGGCCACTGGCTGGTGGCGTGGAACGACAACCCGGACGACACCAGCGCCGGTTTCGTGCGCGATCAACCGAACGC
CGAGACCAGCATCAGCGACTACGACATCAACCTGCCGCAAGTGCTGAACAACGAACTGCGCAAGATCCTCGTCGGCGGCG
ACAAGGCCAACGGCGGCCTGCAGATCCCGGTGGTGGAAGTCCCTGCCGGCCAGGCCAAGGACACCGTGACCCTGTTCCTG
TCCGGTGACGGCGGCTGGCGCGATCTGGACCGCGACGTGGCCGGTGAAATGGCCAAGATCGGCTACCCGGTGGTCGGCAT
CGACACCCTGCGCTACTACTGGCAGCACAAGAGCCCGGAACAGAGCGCCCTGGACCTGACCGAACTGATGCAGCACTACC
GCCAGAAATGGGGCACCAAGCGCTTCATCCTGACCGGCTACTCGTTCGGCGCCGACGTCCTGCCGGCCATCTACAACCGC
CTGCCGGAAACCGAGCAGCAGCGCGTCGACGCAATCATTCTGCTGGCCTTCGCCCGCACCGGCAGCTTCGAAATCGAAGT
CGAAGGCTGGCTCGGCAACGCCGGCAAAGAAGCCGCCACCGGCCCGGAAATGGCCAAGCTGCCACCGGCCAAGGTCGTGT
GCATCTACGGTGAAGAAGAAACCGATGAAAGCGGTTGCACCGACAAGACGGCGGTGGGCGAAGCGGTGAAGCTACCTGGC
GGCCACCACTTCGACGAGAACTACCCGGCGCTGGCCAAGCGTCTGGTGGATCTGATCGAGAAGCGCCAGAACTCGGCGCA
GGTGGCGGAGGAGTGA

Upstream 100 bases:

>100_bases
CCCGTTATATGGCAGTGCCCGCCGGACTCGATCCGCTGGTGGCACTGGCCGATACTGCTGCCCTGATCGCGGGCGGCTTG
ACTGGATTGGTGAAACGCTG

Downstream 100 bases:

>100_bases
TCTGAAGCGCCCCCAAAAAAGCCCCCGCAACTTCGCAGTTGCGGGGGCTTTTTCGTTTTGGCAAACACCCGAGATCCTTG
TGGGAGCCGGGCTTGCCCGC

Product: virulence protein

Products: NA

Alternate protein names: Virulence Protein; Acid lerance Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway VirJ Component-Like; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MIQRSLKYILVALLVLAAIAGGGFWYLKRPAPEPTLEQLTPADGAAMTRVIPGTKPKAQVLVAVNDDQKLSDKQLSTLSR
SASAQIVQVILPKDCLLQSRALQAGLRELNGPATLVSGIGPGAVLAWRWLSEQKDDKAQAVSVDLALEKPGCTHLLPKAA
AHGHWLVAWNDNPDDTSAGFVRDQPNAETSISDYDINLPQVLNNELRKILVGGDKANGGLQIPVVEVPAGQAKDTVTLFL
SGDGGWRDLDRDVAGEMAKIGYPVVGIDTLRYYWQHKSPEQSALDLTELMQHYRQKWGTKRFILTGYSFGADVLPAIYNR
LPETEQQRVDAIILLAFARTGSFEIEVEGWLGNAGKEAATGPEMAKLPPAKVVCIYGEEETDESGCTDKTAVGEAVKLPG
GHHFDENYPALAKRLVDLIEKRQNSAQVAEE

Sequences:

>Translated_431_residues
MIQRSLKYILVALLVLAAIAGGGFWYLKRPAPEPTLEQLTPADGAAMTRVIPGTKPKAQVLVAVNDDQKLSDKQLSTLSR
SASAQIVQVILPKDCLLQSRALQAGLRELNGPATLVSGIGPGAVLAWRWLSEQKDDKAQAVSVDLALEKPGCTHLLPKAA
AHGHWLVAWNDNPDDTSAGFVRDQPNAETSISDYDINLPQVLNNELRKILVGGDKANGGLQIPVVEVPAGQAKDTVTLFL
SGDGGWRDLDRDVAGEMAKIGYPVVGIDTLRYYWQHKSPEQSALDLTELMQHYRQKWGTKRFILTGYSFGADVLPAIYNR
LPETEQQRVDAIILLAFARTGSFEIEVEGWLGNAGKEAATGPEMAKLPPAKVVCIYGEEETDESGCTDKTAVGEAVKLPG
GHHFDENYPALAKRLVDLIEKRQNSAQVAEE
>Mature_431_residues
MIQRSLKYILVALLVLAAIAGGGFWYLKRPAPEPTLEQLTPADGAAMTRVIPGTKPKAQVLVAVNDDQKLSDKQLSTLSR
SASAQIVQVILPKDCLLQSRALQAGLRELNGPATLVSGIGPGAVLAWRWLSEQKDDKAQAVSVDLALEKPGCTHLLPKAA
AHGHWLVAWNDNPDDTSAGFVRDQPNAETSISDYDINLPQVLNNELRKILVGGDKANGGLQIPVVEVPAGQAKDTVTLFL
SGDGGWRDLDRDVAGEMAKIGYPVVGIDTLRYYWQHKSPEQSALDLTELMQHYRQKWGTKRFILTGYSFGADVLPAIYNR
LPETEQQRVDAIILLAFARTGSFEIEVEGWLGNAGKEAATGPEMAKLPPAKVVCIYGEEETDESGCTDKTAVGEAVKLPG
GHHFDENYPALAKRLVDLIEKRQNSAQVAEE

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46802; Mature: 46802

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRSLKYILVALLVLAAIAGGGFWYLKRPAPEPTLEQLTPADGAAMTRVIPGTKPKAQV
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCEEE
LVAVNDDQKLSDKQLSTLSRSASAQIVQVILPKDCLLQSRALQAGLRELNGPATLVSGIG
EEEECCCCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHCCC
PGAVLAWRWLSEQKDDKAQAVSVDLALEKPGCTHLLPKAAAHGHWLVAWNDNPDDTSAGF
CCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCC
VRDQPNAETSISDYDINLPQVLNNELRKILVGGDKANGGLQIPVVEVPAGQAKDTVTLFL
EECCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEE
SGDGGWRDLDRDVAGEMAKIGYPVVGIDTLRYYWQHKSPEQSALDLTELMQHYRQKWGTK
ECCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
RFILTGYSFGADVLPAIYNRLPETEQQRVDAIILLAFARTGSFEIEVEGWLGNAGKEAAT
EEEEEECCCCHHHHHHHHHHCCCHHHHHHCEEEEEEEECCCCEEEEEEECCCCCCCCCCC
GPEMAKLPPAKVVCIYGEEETDESGCTDKTAVGEAVKLPGGHHFDENYPALAKRLVDLIE
CCCHHCCCCCEEEEEECCCCCCCCCCCCCHHCCCEEECCCCCCCCCCCHHHHHHHHHHHH
KRQNSAQVAEE
HCCCCCCCCCC
>Mature Secondary Structure
MIQRSLKYILVALLVLAAIAGGGFWYLKRPAPEPTLEQLTPADGAAMTRVIPGTKPKAQV
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCEEE
LVAVNDDQKLSDKQLSTLSRSASAQIVQVILPKDCLLQSRALQAGLRELNGPATLVSGIG
EEEECCCCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHCCC
PGAVLAWRWLSEQKDDKAQAVSVDLALEKPGCTHLLPKAAAHGHWLVAWNDNPDDTSAGF
CCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCC
VRDQPNAETSISDYDINLPQVLNNELRKILVGGDKANGGLQIPVVEVPAGQAKDTVTLFL
EECCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEE
SGDGGWRDLDRDVAGEMAKIGYPVVGIDTLRYYWQHKSPEQSALDLTELMQHYRQKWGTK
ECCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
RFILTGYSFGADVLPAIYNRLPETEQQRVDAIILLAFARTGSFEIEVEGWLGNAGKEAAT
EEEEEECCCCHHHHHHHHHHCCCHHHHHHCEEEEEEEECCCCEEEEEEECCCCCCCCCCC
GPEMAKLPPAKVVCIYGEEETDESGCTDKTAVGEAVKLPGGHHFDENYPALAKRLVDLIE
CCCHHCCCCCEEEEEECCCCCCCCCCCCCHHCCCEEECCCCCCCCCCCHHHHHHHHHHHH
KRQNSAQVAEE
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA