| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yjaB [H]
Identifier: 77457417
GI number: 77457417
Start: 1357122
End: 1357616
Strand: Reverse
Name: yjaB [H]
Synonym: Pfl01_1190
Alternate gene names: 77457417
Gene position: 1357616-1357122 (Counterclockwise)
Preceding gene: 77457418
Following gene: 77457416
Centisome position: 21.09
GC content: 60.2
Gene sequence:
>495_bases ATGACAAAGAGGCTATCGGGCATGCGTCACCACTCGGTCATCCACACGCCGAAACTCAGCGATTATCAGGAACTGACCCG GGTCTGGGAGGCCTCGGTTCGCGCGACCCACGATTTCCTGCCGGAATCCTACATCGAGCTGCTGAAGAATCTGGTGCTGA CCCGCTACCTCGATGCGGTGATGCTGATCTGCACCCGCGACAGCCACCAGCGCATCACCGGGTTTGCCGGGGTCGCGGCG GGCAAGATCGAAATGCTGTTCATCGACCCGGCCCATCGCGGCCAGGGCCTTGGCAAGAAACTGTTGAAGTACGCGATGGA ACACCTGAACGCCGACGAATTGGACGTCAACGAACAGAACCCCCAGGCGCTGGGGTTTTACTTCAAGCAAGGGTTCGAGG TGATCGGCCGCTCGGAGGTCGATGGCATGGGCCAGCCGTATCCGTTGTTGCATATGCGTCTGAAACAACCGGAGCAGCGC GCGGTACGCGGCTAA
Upstream 100 bases:
>100_bases ACAGATCTAAGCGCGAAAAATACAGAAAGCCCCGCTCTCTTTTACGAGATGCGGGGCTTTTTTACGGCTATCGTTTGGGG TGGGAAGGACTCCCTCATCC
Downstream 100 bases:
>100_bases AAGCCACACGGCGCAAATGCAATCGGGCTTAACCGGCCCCAGGCAGGTACAATGCCCACCCCTTTTTTGTTACGGCCCCT GTCATGACTGACCCGATTCG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTKRLSGMRHHSVIHTPKLSDYQELTRVWEASVRATHDFLPESYIELLKNLVLTRYLDAVMLICTRDSHQRITGFAGVAA GKIEMLFIDPAHRGQGLGKKLLKYAMEHLNADELDVNEQNPQALGFYFKQGFEVIGRSEVDGMGQPYPLLHMRLKQPEQR AVRG
Sequences:
>Translated_164_residues MTKRLSGMRHHSVIHTPKLSDYQELTRVWEASVRATHDFLPESYIELLKNLVLTRYLDAVMLICTRDSHQRITGFAGVAA GKIEMLFIDPAHRGQGLGKKLLKYAMEHLNADELDVNEQNPQALGFYFKQGFEVIGRSEVDGMGQPYPLLHMRLKQPEQR AVRG >Mature_163_residues TKRLSGMRHHSVIHTPKLSDYQELTRVWEASVRATHDFLPESYIELLKNLVLTRYLDAVMLICTRDSHQRITGFAGVAAG KIEMLFIDPAHRGQGLGKKLLKYAMEHLNADELDVNEQNPQALGFYFKQGFEVIGRSEVDGMGQPYPLLHMRLKQPEQRA VRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790442, Length=130, Percent_Identity=43.0769230769231, Blast_Score=106, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 18731; Mature: 18600
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLSGMRHHSVIHTPKLSDYQELTRVWEASVRATHDFLPESYIELLKNLVLTRYLDAV CCCCCCCCHHHCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MLICTRDSHQRITGFAGVAAGKIEMLFIDPAHRGQGLGKKLLKYAMEHLNADELDVNEQN HHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PQALGFYFKQGFEVIGRSEVDGMGQPYPLLHMRLKQPEQRAVRG CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHCCCC >Mature Secondary Structure TKRLSGMRHHSVIHTPKLSDYQELTRVWEASVRATHDFLPESYIELLKNLVLTRYLDAV CCCCCCCHHHCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MLICTRDSHQRITGFAGVAAGKIEMLFIDPAHRGQGLGKKLLKYAMEHLNADELDVNEQN HHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PQALGFYFKQGFEVIGRSEVDGMGQPYPLLHMRLKQPEQRAVRG CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609; 1729233 [H]