| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gufA [H]
Identifier: 77457079
GI number: 77457079
Start: 1002530
End: 1003423
Strand: Direct
Name: gufA [H]
Synonym: Pfl01_0852
Alternate gene names: 77457079
Gene position: 1002530-1003423 (Clockwise)
Preceding gene: 77457078
Following gene: 77457090
Centisome position: 15.57
GC content: 61.86
Gene sequence:
>894_bases ATGGGCACTGAAACACTGGCGATCGGAAGTGGGCGCATGTTTCGTTACGCAATCGGATCGCTGCTGCTGTTGGCGGGTAT GACTTTGCTGATCGCCCACGGACTGGAATGGCTGAACCTGGAGCCGAGGTTGTCGCGGGCTCTACAGGGCGGGGCGATTT TCGCCCTCGGCACCGCACTCGGGGCTGTTCCGGTGCTGGTGATTCGCAACATGCCTCAGGCATTGGGGGATACGCTGTTG GGTTTTGGCGCTGGCGTGATGCTGGCAGCGACCGCGTTTTCGCTGATCGTGCCGGGAATCGCCGCGGCCGAAGGTCTGGG GTTGAGCCCTTGGGGCGCCAGCGGCCTGATCTGCTTTGGCATCATGCTCGGGGCGTTTGGCCTTTATCTGGTTGATCGCC GGGTCTCGGGCGCCTCGCCGGAAATGCTCATCGGCACAGTCGAGCATCCGGTGATTCCGCCGCGGATCTGGTTGTTCGTG TTCGCCATCATTGCCCATAACATCCCGGAAGGCATGGCGGTCGGTGTCTCGGCGGGTGGTGGCATGTCGGACGCAGACAG TCTGGCCATGGGCATTGCCTTGCAGGATGTGCCGGAAGGGCTGGTGATTGCACTGGTACTGGCAGGTGCCGGGATGTCGC GGGTCAAGGCATTCTTGATTGGCGCAGCGTCAGGTCTGGTCGAGCCGGTGTTCGCGCTGCTCTGTGCCTGGCTGGTCAGT CTTGCCGAGTTGTTGCTACCCTTGGGCTTGGCGTTGGCGGCGGGTGCCATGCTGCTGGTGGTGACTCACGAGGTCATCCC GGAGTCGCGACGCAATGGTCACGAGAAGCTTGCAAGCCTGGGATTGTTGATCGGTTTCTGTCTGATGATGGTGATGGATA CGGCGTTGGGCTGA
Upstream 100 bases:
>100_bases CATCAGCGCGTTCTACAACGTGATCAACTGGCCACAAGTCGCTGCGCGTTATCAGGCCGCGCTGGTTTGAGTCTCCTATA AAAACAATCCAAGGCTGACT
Downstream 100 bases:
>100_bases GCCGGGAAGAGGAAGTGAGCTCCCTCGCCTGAAACGGTTTCAACCACCTTCGTCGAAATAGTTGTTGATCAGGGTCACCA GCGCGTCCATGGCTTCCTGT
Product: Zinc transporter ZIP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGTETLAIGSGRMFRYAIGSLLLLAGMTLLIAHGLEWLNLEPRLSRALQGGAIFALGTALGAVPVLVIRNMPQALGDTLL GFGAGVMLAATAFSLIVPGIAAAEGLGLSPWGASGLICFGIMLGAFGLYLVDRRVSGASPEMLIGTVEHPVIPPRIWLFV FAIIAHNIPEGMAVGVSAGGGMSDADSLAMGIALQDVPEGLVIALVLAGAGMSRVKAFLIGAASGLVEPVFALLCAWLVS LAELLLPLGLALAAGAMLLVVTHEVIPESRRNGHEKLASLGLLIGFCLMMVMDTALG
Sequences:
>Translated_297_residues MGTETLAIGSGRMFRYAIGSLLLLAGMTLLIAHGLEWLNLEPRLSRALQGGAIFALGTALGAVPVLVIRNMPQALGDTLL GFGAGVMLAATAFSLIVPGIAAAEGLGLSPWGASGLICFGIMLGAFGLYLVDRRVSGASPEMLIGTVEHPVIPPRIWLFV FAIIAHNIPEGMAVGVSAGGGMSDADSLAMGIALQDVPEGLVIALVLAGAGMSRVKAFLIGAASGLVEPVFALLCAWLVS LAELLLPLGLALAAGAMLLVVTHEVIPESRRNGHEKLASLGLLIGFCLMMVMDTALG >Mature_296_residues GTETLAIGSGRMFRYAIGSLLLLAGMTLLIAHGLEWLNLEPRLSRALQGGAIFALGTALGAVPVLVIRNMPQALGDTLLG FGAGVMLAATAFSLIVPGIAAAEGLGLSPWGASGLICFGIMLGAFGLYLVDRRVSGASPEMLIGTVEHPVIPPRIWLFVF AIIAHNIPEGMAVGVSAGGGMSDADSLAMGIALQDVPEGLVIALVLAGAGMSRVKAFLIGAASGLVEPVFALLCAWLVSL AELLLPLGLALAAGAMLLVVTHEVIPESRRNGHEKLASLGLLIGFCLMMVMDTALG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=324, Percent_Identity=33.9506172839506, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI229577422, Length=150, Percent_Identity=46.6666666666667, Blast_Score=123, Evalue=2e-28, Organism=Escherichia coli, GI1789419, Length=218, Percent_Identity=33.0275229357798, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17507805, Length=309, Percent_Identity=37.8640776699029, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24652846, Length=182, Percent_Identity=41.2087912087912, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 30384; Mature: 30253
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTETLAIGSGRMFRYAIGSLLLLAGMTLLIAHGLEWLNLEPRLSRALQGGAIFALGTAL CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHHHHHHHH GAVPVLVIRNMPQALGDTLLGFGAGVMLAATAFSLIVPGIAAAEGLGLSPWGASGLICFG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHH IMLGAFGLYLVDRRVSGASPEMLIGTVEHPVIPPRIWLFVFAIIAHNIPEGMAVGVSAGG HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCC GMSDADSLAMGIALQDVPEGLVIALVLAGAGMSRVKAFLIGAASGLVEPVFALLCAWLVS CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELLLPLGLALAAGAMLLVVTHEVIPESRRNGHEKLASLGLLIGFCLMMVMDTALG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTETLAIGSGRMFRYAIGSLLLLAGMTLLIAHGLEWLNLEPRLSRALQGGAIFALGTAL CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHHHHHHHH GAVPVLVIRNMPQALGDTLLGFGAGVMLAATAFSLIVPGIAAAEGLGLSPWGASGLICFG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHH IMLGAFGLYLVDRRVSGASPEMLIGTVEHPVIPPRIWLFVFAIIAHNIPEGMAVGVSAGG HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCC GMSDADSLAMGIALQDVPEGLVIALVLAGAGMSRVKAFLIGAASGLVEPVFALLCAWLVS CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELLLPLGLALAAGAMLLVVTHEVIPESRRNGHEKLASLGLLIGFCLMMVMDTALG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]