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The map label for this gene is sodA [H]

Identifier: 77457078

GI number: 77457078

Start: 1001888

End: 1002499

Strand: Direct

Name: sodA [H]

Synonym: Pfl01_0851

Alternate gene names: 77457078

Gene position: 1001888-1002499 (Clockwise)

Preceding gene: 77457077

Following gene: 77457079

Centisome position: 15.56

GC content: 60.13

Gene sequence:

>612_bases
ATGGCTTTTACCCTGCCAGCTTTGCCTTACGCCTACGACGCACTGGAGCCGCACATCGATGCGCAAACCATGGAGATCCA
CTACACCAAGCATCACCAGACCTACATCAACAATCTGAACGCTGCGGTCGAGGGCACCGAATTCGCGGAATGGCCGGTGG
AAAAACTGGTCGCCAGCGTTCAGCAACTCCCGGAAAAACTTCGCGCGGCGGTGATCAACCAGGGCGGCGGTCACGCCAAC
CATTCGCTGTTCTGGGAAGTGATGGTGCCTGGCGGTGGCGGCAAGCCGGACGGCGCGCTGGCCAAGGCGATCGATGAGCA
ACTGGGTGGCCTCGACAGCTTCAAGGAAGCCTTCACCAAAGCCGCGCTGACCCGCTTCGGCAGTGGCTGGGCGTGGCTCA
GCGTGACGCCGGACAAGAAACTGGTAGTGGAAAGCAGCGGCAATCAGGACAGCCCGCTGATGAACGGCAACACGCCGATT
CTCGGGCTCGACGTGTGGGAACACGCTTACTACCTCCGTTATCAGAACCGTCGGCCGGAATACATCAGCGCGTTCTACAA
CGTGATCAACTGGCCACAAGTCGCTGCGCGTTATCAGGCCGCGCTGGTTTGA

Upstream 100 bases:

>100_bases
AGCGAACACGGCGAATACCCGCGCACCCAGCGTTTGCTGCATCCGGATACCGGCAATGCGCGGCGCGCGCCTGCCCCACA
TCACCATGGAGTCCACTGAA

Downstream 100 bases:

>100_bases
GTCTCCTATAAAAACAATCCAAGGCTGACTATGGGCACTGAAACACTGGCGATCGGAAGTGGGCGCATGTTTCGTTACGC
AATCGGATCGCTGCTGCTGT

Product: manganese and iron superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAFTLPALPYAYDALEPHIDAQTMEIHYTKHHQTYINNLNAAVEGTEFAEWPVEKLVASVQQLPEKLRAAVINQGGGHAN
HSLFWEVMVPGGGGKPDGALAKAIDEQLGGLDSFKEAFTKAALTRFGSGWAWLSVTPDKKLVVESSGNQDSPLMNGNTPI
LGLDVWEHAYYLRYQNRRPEYISAFYNVINWPQVAARYQAALV

Sequences:

>Translated_203_residues
MAFTLPALPYAYDALEPHIDAQTMEIHYTKHHQTYINNLNAAVEGTEFAEWPVEKLVASVQQLPEKLRAAVINQGGGHAN
HSLFWEVMVPGGGGKPDGALAKAIDEQLGGLDSFKEAFTKAALTRFGSGWAWLSVTPDKKLVVESSGNQDSPLMNGNTPI
LGLDVWEHAYYLRYQNRRPEYISAFYNVINWPQVAARYQAALV
>Mature_202_residues
AFTLPALPYAYDALEPHIDAQTMEIHYTKHHQTYINNLNAAVEGTEFAEWPVEKLVASVQQLPEKLRAAVINQGGGHANH
SLFWEVMVPGGGGKPDGALAKAIDEQLGGLDSFKEAFTKAALTRFGSGWAWLSVTPDKKLVVESSGNQDSPLMNGNTPIL
GLDVWEHAYYLRYQNRRPEYISAFYNVINWPQVAARYQAALV

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=201, Percent_Identity=46.7661691542289, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI67782305, Length=201, Percent_Identity=46.7661691542289, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI67782309, Length=201, Percent_Identity=38.8059701492537, Blast_Score=135, Evalue=3e-32,
Organism=Escherichia coli, GI1790342, Length=207, Percent_Identity=57.487922705314, Blast_Score=242, Evalue=1e-65,
Organism=Escherichia coli, GI1787946, Length=200, Percent_Identity=45, Blast_Score=188, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17506561, Length=203, Percent_Identity=39.9014778325123, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17569479, Length=201, Percent_Identity=39.3034825870647, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6321796, Length=214, Percent_Identity=43.9252336448598, Blast_Score=157, Evalue=9e-40,
Organism=Drosophila melanogaster, GI17136812, Length=201, Percent_Identity=44.2786069651741, Blast_Score=161, Evalue=2e-40,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22501; Mature: 22369

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTLPALPYAYDALEPHIDAQTMEIHYTKHHQTYINNLNAAVEGTEFAEWPVEKLVASV
CCEECCCCCHHHHHCCCCCCCEEEEEEEEHHHHHHHHHCCHHCCCCCHHHCCHHHHHHHH
QQLPEKLRAAVINQGGGHANHSLFWEVMVPGGGGKPDGALAKAIDEQLGGLDSFKEAFTK
HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
AALTRFGSGWAWLSVTPDKKLVVESSGNQDSPLMNGNTPILGLDVWEHAYYLRYQNRRPE
HHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHEEEEECCCCCH
YISAFYNVINWPQVAARYQAALV
HHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
AFTLPALPYAYDALEPHIDAQTMEIHYTKHHQTYINNLNAAVEGTEFAEWPVEKLVASV
CEECCCCCHHHHHCCCCCCCEEEEEEEEHHHHHHHHHCCHHCCCCCHHHCCHHHHHHHH
QQLPEKLRAAVINQGGGHANHSLFWEVMVPGGGGKPDGALAKAIDEQLGGLDSFKEAFTK
HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
AALTRFGSGWAWLSVTPDKKLVVESSGNQDSPLMNGNTPILGLDVWEHAYYLRYQNRRPE
HHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHEEEEECCCCCH
YISAFYNVINWPQVAARYQAALV
HHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA