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The map label for this gene is ybeQ [H]

Identifier: 77457027

GI number: 77457027

Start: 943875

End: 944633

Strand: Direct

Name: ybeQ [H]

Synonym: Pfl01_0800

Alternate gene names: 77457027

Gene position: 943875-944633 (Clockwise)

Preceding gene: 77457026

Following gene: 77457029

Centisome position: 14.66

GC content: 63.24

Gene sequence:

>759_bases
GTGGCGGACTTTCGGTTGCGTCGCGAAGAAGTCCTCGACGGCGAACGCCTCACGGCCATGCTCGAAGAAAGTCCTGCCCG
CGCGGCTCAGGCAATTCTGCTGGCGGCGGGTGACGGCGTGCTGGAGGCGCAGGCGCTGCTCGGGCAGATCCTGCTCGATG
GCCACGGGATTGCTCAGGATCAGCCGTTGGCATTGCGCTGGTTTGAGATTGCTGCAGGGCAAGGTCATCTGATGGCGCGC
AACATGCTCGGTCGCTGCCATGAACACGGATGGGGTTGTGTGGCGGACGCAGCAGTTGCCGCCAGGCATTATCGCGTTGC
AGCAGATGAAGGGCTGGATTGGGCGATGTACAACTTCGCCAATCTGCTCGCAACCGGACGCGGTGTAGCGGTCGATCATC
TTCAGGCCATGGCGTTGTATCAACGCGCTGCCGAGGCCGGTCATGCCAAGTCGATGAACTTGCTCGGGCGTTATCTGGAG
GAAGGGCAAGTGTGCCCGTCGGATCCGGCAGCGGCCCGTGACTGGTATCGACGTTCGGCCGAAGGCGGAGACTTTCGCGG
GCAGTTCAGCCACGCGGCAGTACTGGCGGCGGAGGGGCGCGTTGATGATGCGTTGGTCTGGCTGGAGAAAGCGCTGACCG
GCGGCAACCTGAACTTCCTGCGAGTGGCCAGCCAGACGTTGGCAAGCGCAACCGATCCGCGAATCCAGGCACTGGCGCAG
GCCTACGCTCGTCGTTGCGCCGAGTTACAGAACACCTGA

Upstream 100 bases:

>100_bases
TGCGATCCAGCAACTGACCCACGACATGCCCGATCACCCTTCGCTGATCCGCCTTACCGGCACCTATCACAACCTCTTGC
GCCGCTGGGTCGAGGTGTAA

Downstream 100 bases:

>100_bases
ATCGCAGCCACAAAAAAGCCCATGACACGTCATGGGCTTTTTGCATTACGCCAGCATCGCTTACACGTAGAACGACTTCA
GCGGCGGAAAGCCATTGAAC

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MADFRLRREEVLDGERLTAMLEESPARAAQAILLAAGDGVLEAQALLGQILLDGHGIAQDQPLALRWFEIAAGQGHLMAR
NMLGRCHEHGWGCVADAAVAARHYRVAADEGLDWAMYNFANLLATGRGVAVDHLQAMALYQRAAEAGHAKSMNLLGRYLE
EGQVCPSDPAAARDWYRRSAEGGDFRGQFSHAAVLAAEGRVDDALVWLEKALTGGNLNFLRVASQTLASATDPRIQALAQ
AYARRCAELQNT

Sequences:

>Translated_252_residues
MADFRLRREEVLDGERLTAMLEESPARAAQAILLAAGDGVLEAQALLGQILLDGHGIAQDQPLALRWFEIAAGQGHLMAR
NMLGRCHEHGWGCVADAAVAARHYRVAADEGLDWAMYNFANLLATGRGVAVDHLQAMALYQRAAEAGHAKSMNLLGRYLE
EGQVCPSDPAAARDWYRRSAEGGDFRGQFSHAAVLAAEGRVDDALVWLEKALTGGNLNFLRVASQTLASATDPRIQALAQ
AYARRCAELQNT
>Mature_251_residues
ADFRLRREEVLDGERLTAMLEESPARAAQAILLAAGDGVLEAQALLGQILLDGHGIAQDQPLALRWFEIAAGQGHLMARN
MLGRCHEHGWGCVADAAVAARHYRVAADEGLDWAMYNFANLLATGRGVAVDHLQAMALYQRAAEAGHAKSMNLLGRYLEE
GQVCPSDPAAARDWYRRSAEGGDFRGQFSHAAVLAAEGRVDDALVWLEKALTGGNLNFLRVASQTLASATDPRIQALAQA
YARRCAELQNT

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=187, Percent_Identity=24.5989304812834, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87081769, Length=206, Percent_Identity=32.0388349514563, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27261; Mature: 27130

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFRLRREEVLDGERLTAMLEESPARAAQAILLAAGDGVLEAQALLGQILLDGHGIAQD
CCCCHHHHHHHCCHHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCC
QPLALRWFEIAAGQGHLMARNMLGRCHEHGWGCVADAAVAARHYRVAADEGLDWAMYNFA
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHH
NLLATGRGVAVDHLQAMALYQRAAEAGHAKSMNLLGRYLEEGQVCPSDPAAARDWYRRSA
HHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
EGGDFRGQFSHAAVLAAEGRVDDALVWLEKALTGGNLNFLRVASQTLASATDPRIQALAQ
CCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
AYARRCAELQNT
HHHHHHHHHCCC
>Mature Secondary Structure 
ADFRLRREEVLDGERLTAMLEESPARAAQAILLAAGDGVLEAQALLGQILLDGHGIAQD
CCCHHHHHHHCCHHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCC
QPLALRWFEIAAGQGHLMARNMLGRCHEHGWGCVADAAVAARHYRVAADEGLDWAMYNFA
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHH
NLLATGRGVAVDHLQAMALYQRAAEAGHAKSMNLLGRYLEEGQVCPSDPAAARDWYRRSA
HHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
EGGDFRGQFSHAAVLAAEGRVDDALVWLEKALTGGNLNFLRVASQTLASATDPRIQALAQ
CCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
AYARRCAELQNT
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]