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The map label for this gene is ybiX [C]

Identifier: 77457026

GI number: 77457026

Start: 943194

End: 943874

Strand: Direct

Name: ybiX [C]

Synonym: Pfl01_0799

Alternate gene names: 77457026

Gene position: 943194-943874 (Clockwise)

Preceding gene: 77457023

Following gene: 77457027

Centisome position: 14.65

GC content: 61.53

Gene sequence:

>681_bases
ATGCTCCTGCACATCCCCGCTCTGTTTGAGAAAGACGAAGTGCGGCGCATCCGCGAAGCTCTGGAACAAGCCGACTGGGC
TGATGGAAAGATCACCGCCGGCTATCAATCGGCCAAGGCCAAGCACAATCTGCAGTTGCCGGAAGGCCATCCACTGGCCA
AAGAGATTGGCGCGGCGATGCTTGAGCGCCTGTGGAAAAATCCGCTGTTCATGTCCGCCGCGCTGCCGCACAAAGTGTTC
CCGCCGTTACTCAACTGCTACACGGCGGGCGGCAGTTTCGATTTCCACATCGACAACGCCGTGCGCCAGCCCAAGGGCAG
TATCGAGCGCGTACGCACCGACCTGTCCGCCACGCTGTTTTTCAGCGAGCCCGAGGACTACGACGGCGGCGAACTGGAAA
TCCAGGACACTTTCGGCACCCAGCGGGTGAAACTGCCCGCCGGCGACATGGTGCTGTACCCCGGCACCAGCCTGCACAAG
GTCAACGCGGTCACTCGTGGTGCGCGTTATGCCTCGTTCTTCTGGACCCAGAGCCTGGTGCGAGAGGACAGCCAGCGCGC
CTTGCTGTTCGAGATGGACGGTGCGATCCAGCAACTGACCCACGACATGCCCGATCACCCTTCGCTGATCCGCCTTACCG
GCACCTATCACAACCTCTTGCGCCGCTGGGTCGAGGTGTAA

Upstream 100 bases:

>100_bases
TTAACCTTACGGTTTTTGCCAGTTCATTCGTCTAGCGCGTTTTACACGGCCAATAAGAATCAATACCATTGGCATCCTTT
TGTCATCTGGTGACGTCGCC

Downstream 100 bases:

>100_bases
GTGGCGGACTTTCGGTTGCGTCGCGAAGAAGTCCTCGACGGCGAACGCCTCACGGCCATGCTCGAAGAAAGTCCTGCCCG
CGCGGCTCAGGCAATTCTGC

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLLHIPALFEKDEVRRIREALEQADWADGKITAGYQSAKAKHNLQLPEGHPLAKEIGAAMLERLWKNPLFMSAALPHKVF
PPLLNCYTAGGSFDFHIDNAVRQPKGSIERVRTDLSATLFFSEPEDYDGGELEIQDTFGTQRVKLPAGDMVLYPGTSLHK
VNAVTRGARYASFFWTQSLVREDSQRALLFEMDGAIQQLTHDMPDHPSLIRLTGTYHNLLRRWVEV

Sequences:

>Translated_226_residues
MLLHIPALFEKDEVRRIREALEQADWADGKITAGYQSAKAKHNLQLPEGHPLAKEIGAAMLERLWKNPLFMSAALPHKVF
PPLLNCYTAGGSFDFHIDNAVRQPKGSIERVRTDLSATLFFSEPEDYDGGELEIQDTFGTQRVKLPAGDMVLYPGTSLHK
VNAVTRGARYASFFWTQSLVREDSQRALLFEMDGAIQQLTHDMPDHPSLIRLTGTYHNLLRRWVEV
>Mature_226_residues
MLLHIPALFEKDEVRRIREALEQADWADGKITAGYQSAKAKHNLQLPEGHPLAKEIGAAMLERLWKNPLFMSAALPHKVF
PPLLNCYTAGGSFDFHIDNAVRQPKGSIERVRTDLSATLFFSEPEDYDGGELEIQDTFGTQRVKLPAGDMVLYPGTSLHK
VNAVTRGARYASFFWTQSLVREDSQRALLFEMDGAIQQLTHDMPDHPSLIRLTGTYHNLLRRWVEV

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=227, Percent_Identity=48.0176211453744, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y799_PSEPF (Q3KI64)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346531.1
- ProteinModelPortal:   Q3KI64
- SMR:   Q3KI64
- STRING:   Q3KI64
- GeneID:   3715416
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0799
- eggNOG:   COG3128
- HOGENOM:   HBG285605
- OMA:   ADWADGK
- ProtClustDB:   PRK05467
- BioCyc:   PFLU205922:PFL_0799-MONOMER
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 25570; Mature: 25570

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS51471 FE2OG_OXY; PS00024 HEMOPEXIN

Important sites: BINDING 169-169

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHIPALFEKDEVRRIREALEQADWADGKITAGYQSAKAKHNLQLPEGHPLAKEIGAAM
CEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHH
LERLWKNPLFMSAALPHKVFPPLLNCYTAGGSFDFHIDNAVRQPKGSIERVRTDLSATLF
HHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECHHHHCCCCHHHHHHHHHHEEEE
FSEPEDYDGGELEIQDTFGTQRVKLPAGDMVLYPGTSLHKVNAVTRGARYASFFWTQSLV
ECCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
REDSQRALLFEMDGAIQQLTHDMPDHPSLIRLTGTYHNLLRRWVEV
HCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCC
>Mature Secondary Structure
MLLHIPALFEKDEVRRIREALEQADWADGKITAGYQSAKAKHNLQLPEGHPLAKEIGAAM
CEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHH
LERLWKNPLFMSAALPHKVFPPLLNCYTAGGSFDFHIDNAVRQPKGSIERVRTDLSATLF
HHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECHHHHCCCCHHHHHHHHHHEEEE
FSEPEDYDGGELEIQDTFGTQRVKLPAGDMVLYPGTSLHKVNAVTRGARYASFFWTQSLV
ECCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
REDSQRALLFEMDGAIQQLTHDMPDHPSLIRLTGTYHNLLRRWVEV
HCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA