| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457029
Identifier: 77457029
GI number: 77457029
Start: 946670
End: 947842
Strand: Direct
Name: 77457029
Synonym: Pfl01_0802
Alternate gene names: NA
Gene position: 946670-947842 (Clockwise)
Preceding gene: 77457027
Following gene: 77457034
Centisome position: 14.7
GC content: 47.14
Gene sequence:
>1173_bases TTGACAGGTGGCAGTCGAGGTGGTGTGGAGTACGTTATGTTCTCAGCTACTTCGGAGACTCAGATAATGAACGTGAATAT GAAAGGAAATGAAACAGTAACGGCGCAACGCAATCCAGACTTTCCAGATGATGGACCACATGTCAGTGCAGTATTTTCAG CACCTATGGCTGAGCTGATATATATGGAGCAGGAAGTTGCGGCAGGTAGAGATTATCCTGGCATTTATTGGTGTGGGAGT AACTTTAGGTTAGGGCGCTGGGGAGGGTATTTTGGGTTGCAAACTAATGGTGGTGCTGTCATTGGTGGTGTGCCTTATTA TAATAATAATATTTGTTCCGTTTGGGGTGTGGGGGGGGTCAATCCTGAGCTGGAGTATGGGGTTGAGGGATTGTACAGTG ACATTTTTACGGGGGAGGGAGTAGGTCTGCATACTTCTCATGCGATGCCTTGGAAAGCTGGCTATGTGTATGCGACAGTT TTGCGCAGATGGTATCGGCCAGGAGACAGCTTTACGCGAGTTGCGACGTTTATGTATTCCTACGAAACAGGGAAGTGGAC GCACTTTTCAACTATTAAGATTCCAGAGGGAAATGTGTCATTTGTGAATCCTACTACTGCGGGATTTCTAGAACGGTTTG GTGGAAGTGCTACGCGTTATGATGGCTTTTGGGGACCGTCCTACCGCATGAGTGCTGATGGGGTGTGGGAAAAACCGCTT TACTTCGAGGGGGCAGCAGGAGGTAATAGGCCTTGGACGTGGGATATTGTTCCTGATGGGGATCAGGCACTAGGTCGAGT GCAGGTGGTATGTGGTGGGACTAATTCAAATACTGAAAACTACAAAAAGGTCAACGTGCAGCCACACAGTGACAAGCCGG CTCCTGTGGATAATAAAATTGCTGTTATGGGGATGAATGCCCGCTATCAAAATGATGGAGTTTATGTCGAATGGGTAACT GATGATGGCCGAACCCCACAGTTTAGTCACTTGTTGCGGGTGCATACGGGCAGTGCGACAGGTCCTGTAATAGCAAGTAA TACTGACTTTTTTCCGGAAAAGCGCTCTGCTGCATTTGCTATGGGCAAACCACAAGAGGAGTGTTATGTAAGTCTGGTGT TGACCGATATTTTCAATCAGCAATCGAACTATGGGTATACGAAATTATTGTAG
Upstream 100 bases:
>100_bases GATACACGAGCAGGCAGCGACCTCGAGCCCGTGCAGGCAACCAAGAAATAATCCTTGATAAATAAGCAGTTATATATTTC TGCGATTTCGACTGTCAGAG
Downstream 100 bases:
>100_bases TTTTCGGGGTTTCCTGTATTTGAGGTTTAAAGTAATTTGCTGGGTTGCGGGGTTTTTCGGTGTCGATACGCCGAAGATAT TTCTTTGGTCGTAACCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTGGSRGGVEYVMFSATSETQIMNVNMKGNETVTAQRNPDFPDDGPHVSAVFSAPMAELIYMEQEVAAGRDYPGIYWCGS NFRLGRWGGYFGLQTNGGAVIGGVPYYNNNICSVWGVGGVNPELEYGVEGLYSDIFTGEGVGLHTSHAMPWKAGYVYATV LRRWYRPGDSFTRVATFMYSYETGKWTHFSTIKIPEGNVSFVNPTTAGFLERFGGSATRYDGFWGPSYRMSADGVWEKPL YFEGAAGGNRPWTWDIVPDGDQALGRVQVVCGGTNSNTENYKKVNVQPHSDKPAPVDNKIAVMGMNARYQNDGVYVEWVT DDGRTPQFSHLLRVHTGSATGPVIASNTDFFPEKRSAAFAMGKPQEECYVSLVLTDIFNQQSNYGYTKLL
Sequences:
>Translated_390_residues MTGGSRGGVEYVMFSATSETQIMNVNMKGNETVTAQRNPDFPDDGPHVSAVFSAPMAELIYMEQEVAAGRDYPGIYWCGS NFRLGRWGGYFGLQTNGGAVIGGVPYYNNNICSVWGVGGVNPELEYGVEGLYSDIFTGEGVGLHTSHAMPWKAGYVYATV LRRWYRPGDSFTRVATFMYSYETGKWTHFSTIKIPEGNVSFVNPTTAGFLERFGGSATRYDGFWGPSYRMSADGVWEKPL YFEGAAGGNRPWTWDIVPDGDQALGRVQVVCGGTNSNTENYKKVNVQPHSDKPAPVDNKIAVMGMNARYQNDGVYVEWVT DDGRTPQFSHLLRVHTGSATGPVIASNTDFFPEKRSAAFAMGKPQEECYVSLVLTDIFNQQSNYGYTKLL >Mature_389_residues TGGSRGGVEYVMFSATSETQIMNVNMKGNETVTAQRNPDFPDDGPHVSAVFSAPMAELIYMEQEVAAGRDYPGIYWCGSN FRLGRWGGYFGLQTNGGAVIGGVPYYNNNICSVWGVGGVNPELEYGVEGLYSDIFTGEGVGLHTSHAMPWKAGYVYATVL RRWYRPGDSFTRVATFMYSYETGKWTHFSTIKIPEGNVSFVNPTTAGFLERFGGSATRYDGFWGPSYRMSADGVWEKPLY FEGAAGGNRPWTWDIVPDGDQALGRVQVVCGGTNSNTENYKKVNVQPHSDKPAPVDNKIAVMGMNARYQNDGVYVEWVTD DGRTPQFSHLLRVHTGSATGPVIASNTDFFPEKRSAAFAMGKPQEECYVSLVLTDIFNQQSNYGYTKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42966; Mature: 42835
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGSRGGVEYVMFSATSETQIMNVNMKGNETVTAQRNPDFPDDGPHVSAVFSAPMAELI CCCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEHHCCHHHHH YMEQEVAAGRDYPGIYWCGSNFRLGRWGGYFGLQTNGGAVIGGVPYYNNNICSVWGVGGV HHHHHHHCCCCCCEEEEECCCEEEECCCCEEEEECCCCEEECCCCEECCCEEEEEECCCC NPELEYGVEGLYSDIFTGEGVGLHTSHAMPWKAGYVYATVLRRWYRPGDSFTRVATFMYS CCCHHHCHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEEE YETGKWTHFSTIKIPEGNVSFVNPTTAGFLERFGGSATRYDGFWGPSYRMSADGVWEKPL ECCCCEEEEEEEEECCCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCE YFEGAAGGNRPWTWDIVPDGDQALGRVQVVCGGTNSNTENYKKVNVQPHSDKPAPVDNKI EEECCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEE AVMGMNARYQNDGVYVEWVTDDGRTPQFSHLLRVHTGSATGPVIASNTDFFPEKRSAAFA EEEEECCEECCCCEEEEEEECCCCCCCHHEEEEEECCCCCCCEEECCCCCCCCCCCCEEE MGKPQEECYVSLVLTDIFNQQSNYGYTKLL CCCCHHHHEEEEEEHHHHCCCCCCCEEECC >Mature Secondary Structure TGGSRGGVEYVMFSATSETQIMNVNMKGNETVTAQRNPDFPDDGPHVSAVFSAPMAELI CCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEHHCCHHHHH YMEQEVAAGRDYPGIYWCGSNFRLGRWGGYFGLQTNGGAVIGGVPYYNNNICSVWGVGGV HHHHHHHCCCCCCEEEEECCCEEEECCCCEEEEECCCCEEECCCCEECCCEEEEEECCCC NPELEYGVEGLYSDIFTGEGVGLHTSHAMPWKAGYVYATVLRRWYRPGDSFTRVATFMYS CCCHHHCHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEEE YETGKWTHFSTIKIPEGNVSFVNPTTAGFLERFGGSATRYDGFWGPSYRMSADGVWEKPL ECCCCEEEEEEEEECCCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCE YFEGAAGGNRPWTWDIVPDGDQALGRVQVVCGGTNSNTENYKKVNVQPHSDKPAPVDNKI EEECCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEE AVMGMNARYQNDGVYVEWVTDDGRTPQFSHLLRVHTGSATGPVIASNTDFFPEKRSAAFA EEEEECCEECCCCEEEEEEECCCCCCCHHEEEEEECCCCCCCEEECCCCCCCCCCCCEEE MGKPQEECYVSLVLTDIFNQQSNYGYTKLL CCCCHHHHEEEEEEHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA