Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456906

Identifier: 77456906

GI number: 77456906

Start: 792530

End: 792949

Strand: Direct

Name: 77456906

Synonym: Pfl01_0678

Alternate gene names: NA

Gene position: 792530-792949 (Clockwise)

Preceding gene: 77456902

Following gene: 77456913

Centisome position: 12.31

GC content: 61.67

Gene sequence:

>420_bases
ATGATGTGGACTTCAACGCAGTATCGGCAGGTGGTGCGCGGCAGCGCCTGGTATGACTTGATCGTGACGGCGGCGTTTGT
CACGCCGTGGAGTTTTGCTGTGTTGCATGGGTTGCTGACGGCGCTCAGTCAGGCGCTGGAGCTGCCCGGCGAGCTGCCGC
CGTTCGAACCTGCGCACCTGTTGATAGCCAATTTGTTCGGTTCGGTTGTGTGCATGTGGGCGGTGCTGCGGATTCGTGAT
CCGCAGCCGGTTTATGGGCGCTATGACGCAGTGACGCGATTTCTGTTCGCCGGGTGGATGACGTATGCCGTGGCCCACGG
CGCCAGTTCGTTGGTGGTGGGATTCCTGGTTCTCGAAGTGGCGTGGGGCATTGCTCAGGCGTTGCCGGTTCGGTCGCTGT
CGCGAGCCGTAACGGCTTAG

Upstream 100 bases:

>100_bases
GCCAACTCACCGATGCGCATCTTGCAGGTCTCGAAAGTGTTTGACCCTGGAGCATACTCCAGGCTTTACCGTGGTTGCTC
CCTGAATTTTTGGAGCAAGG

Downstream 100 bases:

>100_bases
TGCCCGGCCTGCCACGGCTGCCCCAGTGATACCGGCGCATACAGCCGTGTACGCACTGCATCGCGCGACAACAGCACCAG
CACCAGAATGGTCGCGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHLLIANLFGSVVCMWAVLRIRD
PQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEVAWGIAQALPVRSLSRAVTA

Sequences:

>Translated_139_residues
MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHLLIANLFGSVVCMWAVLRIRD
PQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEVAWGIAQALPVRSLSRAVTA
>Mature_139_residues
MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHLLIANLFGSVVCMWAVLRIRD
PQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEVAWGIAQALPVRSLSRAVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15295; Mature: 15295

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHL
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LIANLFGSVVCMWAVLRIRDPQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEV
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
AWGIAQALPVRSLSRAVTA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHL
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LIANLFGSVVCMWAVLRIRDPQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEV
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
AWGIAQALPVRSLSRAVTA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA