| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456906
Identifier: 77456906
GI number: 77456906
Start: 792530
End: 792949
Strand: Direct
Name: 77456906
Synonym: Pfl01_0678
Alternate gene names: NA
Gene position: 792530-792949 (Clockwise)
Preceding gene: 77456902
Following gene: 77456913
Centisome position: 12.31
GC content: 61.67
Gene sequence:
>420_bases ATGATGTGGACTTCAACGCAGTATCGGCAGGTGGTGCGCGGCAGCGCCTGGTATGACTTGATCGTGACGGCGGCGTTTGT CACGCCGTGGAGTTTTGCTGTGTTGCATGGGTTGCTGACGGCGCTCAGTCAGGCGCTGGAGCTGCCCGGCGAGCTGCCGC CGTTCGAACCTGCGCACCTGTTGATAGCCAATTTGTTCGGTTCGGTTGTGTGCATGTGGGCGGTGCTGCGGATTCGTGAT CCGCAGCCGGTTTATGGGCGCTATGACGCAGTGACGCGATTTCTGTTCGCCGGGTGGATGACGTATGCCGTGGCCCACGG CGCCAGTTCGTTGGTGGTGGGATTCCTGGTTCTCGAAGTGGCGTGGGGCATTGCTCAGGCGTTGCCGGTTCGGTCGCTGT CGCGAGCCGTAACGGCTTAG
Upstream 100 bases:
>100_bases GCCAACTCACCGATGCGCATCTTGCAGGTCTCGAAAGTGTTTGACCCTGGAGCATACTCCAGGCTTTACCGTGGTTGCTC CCTGAATTTTTGGAGCAAGG
Downstream 100 bases:
>100_bases TGCCCGGCCTGCCACGGCTGCCCCAGTGATACCGGCGCATACAGCCGTGTACGCACTGCATCGCGCGACAACAGCACCAG CACCAGAATGGTCGCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHLLIANLFGSVVCMWAVLRIRD PQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEVAWGIAQALPVRSLSRAVTA
Sequences:
>Translated_139_residues MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHLLIANLFGSVVCMWAVLRIRD PQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEVAWGIAQALPVRSLSRAVTA >Mature_139_residues MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHLLIANLFGSVVCMWAVLRIRD PQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEVAWGIAQALPVRSLSRAVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15295; Mature: 15295
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHL CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LIANLFGSVVCMWAVLRIRDPQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH AWGIAQALPVRSLSRAVTA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMWTSTQYRQVVRGSAWYDLIVTAAFVTPWSFAVLHGLLTALSQALELPGELPPFEPAHL CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LIANLFGSVVCMWAVLRIRDPQPVYGRYDAVTRFLFAGWMTYAVAHGASSLVVGFLVLEV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH AWGIAQALPVRSLSRAVTA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA