Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456878

Identifier: 77456878

GI number: 77456878

Start: 761573

End: 761818

Strand: Direct

Name: 77456878

Synonym: Pfl01_0650

Alternate gene names: NA

Gene position: 761573-761818 (Clockwise)

Preceding gene: 77456868

Following gene: 77456879

Centisome position: 11.83

GC content: 54.47

Gene sequence:

>246_bases
ATGTTGCGAACGCATAACACCCGGTGCCTTCAAGGAGAATCAGTCATGTCCTTCGCAAAAAAAACCGTGCAGACAATCAA
GTCCCAGATCACTTTTTACAAAGGCCTGGTCAAGGACACCGAAGGGGCGTCGGGTATCGAGTACGCGATCATCGCCGGTA
TGGTGGCGGTGGCGCTGGCCGCATTCGTGACACCGATCTCGACCGCCATTACCACGATGTTCAACACCATTCAGGCCGCA
CTCTGA

Upstream 100 bases:

>100_bases
TTTTGCCGTTGTATGGGTCGCTAATACTTTGGTGTTAATCCGTTCTTACAGTTGTAGGTCCGGACATTGCCGACAATGCT
GATGCTGGCACGGGGAAATC

Downstream 100 bases:

>100_bases
TCGGGTAGGCAGCCATGGCCGGCAACTTGCGAATGCGCCCAAGGGGTTCTAACGTCAGCGCTTAGTCCATCGCAGGAATC
GCCCTATGTCTTTCTCCCAT

Product: Flp/Fap pilin component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MLRTHNTRCLQGESVMSFAKKTVQTIKSQITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAA
L

Sequences:

>Translated_81_residues
MLRTHNTRCLQGESVMSFAKKTVQTIKSQITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAA
L
>Mature_81_residues
MLRTHNTRCLQGESVMSFAKKTVQTIKSQITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAA
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8672; Mature: 8672

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTHNTRCLQGESVMSFAKKTVQTIKSQITFYKGLVKDTEGASGIEYAIIAGMVAVALA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AFVTPISTAITTMFNTIQAAL
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRTHNTRCLQGESVMSFAKKTVQTIKSQITFYKGLVKDTEGASGIEYAIIAGMVAVALA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AFVTPISTAITTMFNTIQAAL
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA