Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456823

Identifier: 77456823

GI number: 77456823

Start: 687960

End: 689339

Strand: Reverse

Name: 77456823

Synonym: Pfl01_0595

Alternate gene names: NA

Gene position: 689339-687960 (Counterclockwise)

Preceding gene: 77456824

Following gene: 77456822

Centisome position: 10.71

GC content: 63.12

Gene sequence:

>1380_bases
ATGAAACAGCCCAAACCGAATTTCTACAACCTGGCCTGGCGTTGGCATTTCTATGCCGGATTGTTCGTCGCGCCATTCAT
GGTGATGCTGGCCCTGACCGGCATCATTTACCTGTTCAAACCGCAGCTCGATTCGCTGATGTACAGCAGCCTGCTGAACG
TCCCCGCCGGGCATCACACGGTGCCGGCCGACGACTTGCTGCAAAAGGTCAAAAGCGCTTATCCACAGGGCCAGGTCACC
CAGTACCTGCCGCCGGTAAATGCCGAGCGCAGCGCGCAGTTTGTCGTGGCCAATGCCGGCCATGAGCTGAACGTGTTCGT
CGATCCGTACCACGGCGACATCCTTGGCGAGCAGGATGCCAAGCAGAACCTGCAAGCCATCGCCCGGGCGATTCACGGCG
AGTTGATGATCGGCACCGTCGGTGACCGACTGATCGAAATGGCCGCCGGCTGGGGCGTGGTGCTGGTGGTGTCCGGGGTT
TTCCTGTGGTGGCCGCGAGGTCAGGCAGCGGGGATTCTGTGGCCACGCCTGAGCAGTCGCGGCCGCGTGCTGTGGCGTGA
CCTGCATGCCGTTACCGGATTCTGGGGCGCCGCGTTGCTGCTGGTGATGCTGCTCAGCGGCATGACCTGGACCGGTTTCT
GGGGCAAGCAGTACGCGCAGGTGTGGAACGTGTTCCCGGCGGCGATGTGGGACAACGTGCCGACTTCCGATGTCGAGGCC
GGCAGCCTCAATAACGCCGCGCGCCAGACCGTGCCGTGGGCGATGGAAAACACCCCGATGCCGATGTCCGGCGACCACGC
CGAACACATGGCCCACGGCGGTATGCAACACGGCCCCGCTGCACCGACCATCCGCCTGCAGGACGTGCAAAACATCGCCG
TTGAGCGCAAGGTCGAGCCGGGCTACAGCATCACAATGCCGACCACCGCCACCGGCGTGTTCACCATCGCCGTGTTCGCC
GACGACCCACGCAACGACGCCACCCTGCACGTCGATCAGTACACCGGCAAGGTGCTGGCCGATGTGCGCTTCGAGCAGTA
CGGCGCGGTTGCCCGGGCTACCGAGATCGGCGTGATGCTCCACGAAGGCAAGATGTTCGGCACTTTCAACCAGATCATCG
TGCTGCTGATCTGCCTGATGATTTTGCTCAGCGCCGTCAGCGGCGTGGTGATCTGGTGGAAGCGTCGACCACAGGGCAAG
TTCGGCGTGCCGCCGCTGCGCCACGATCTGCCGAAGTGGAAAACCGGGGTGGCGATCATGCTGGTTCTGGCGGTGGTGTT
TCCGCTGGTGGGGGCTTCGCTGGTGGTGGTGTGGTTGCTGGATCGGCTGCTGTTGTCGCGTCTGGCCCGGCAAACTGAAT
CTGCCTCAACTTCATCGTGA

Upstream 100 bases:

>100_bases
AAGGTGGACATGAGTTTCTAACCCTGAAGGGCGCTCGCTCCCTTCAGGGAGCGGGCGGCAACAGAAAACGAGAAGATCCA
AGCCAAGCGGAGCACACGTG

Downstream 100 bases:

>100_bases
ATCTCGCGAGATGCGCGATCCAGACAGATCTTTAAACTGCCGGGGCTTAATCTCCGGCAATTTTTAGTGTTACTGTATAA
CGCAAATTTGCTGCTCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; Sulfite Reductase; Peptidase; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Containing Protein; Transmembrane Protein; Flavodoxin/Nitric Oxide Synthase; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Sulfite Reductase Flavoprotein Subunit Alpha; Protein Containing PepSY-Associated TM Helix; Transmembrane Transporter; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Sulfite Reductase Alpha Subunit; Iron-Regulated Transmembrane Protein; Sulfite Reductase Flavoprotein Component

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHTVPADDLLQKVKSAYPQGQVT
QYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDAKQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGV
FLWWPRGQAAGILWPRLSSRGRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA
GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEPGYSITMPTTATGVFTIAVFA
DDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVMLHEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGK
FGVPPLRHDLPKWKTGVAIMLVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS

Sequences:

>Translated_459_residues
MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHTVPADDLLQKVKSAYPQGQVT
QYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDAKQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGV
FLWWPRGQAAGILWPRLSSRGRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA
GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEPGYSITMPTTATGVFTIAVFA
DDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVMLHEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGK
FGVPPLRHDLPKWKTGVAIMLVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS
>Mature_459_residues
MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHTVPADDLLQKVKSAYPQGQVT
QYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDAKQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGV
FLWWPRGQAAGILWPRLSSRGRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA
GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEPGYSITMPTTATGVFTIAVFA
DDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVMLHEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGK
FGVPPLRHDLPKWKTGVAIMLVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50666; Mature: 50666

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHT
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VPADDLLQKVKSAYPQGQVTQYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDA
CCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHH
KQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGVFLWWPRGQAAGILWPRLSSR
HHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCEECCCCCCC
GRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC
GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEP
CCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCC
GYSITMPTTATGVFTIAVFADDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVML
CCEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHEEEE
HEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGKFGVPPLRHDLPKWKTGVAIM
ECCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHH
LVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHT
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VPADDLLQKVKSAYPQGQVTQYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDA
CCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHH
KQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGVFLWWPRGQAAGILWPRLSSR
HHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCEECCCCCCC
GRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC
GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEP
CCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCC
GYSITMPTTATGVFTIAVFADDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVML
CCEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHEEEE
HEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGKFGVPPLRHDLPKWKTGVAIM
ECCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHH
LVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA