Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yadT [C]

Identifier: 77456820

GI number: 77456820

Start: 683926

End: 684873

Strand: Reverse

Name: yadT [C]

Synonym: Pfl01_0592

Alternate gene names: 77456820

Gene position: 684873-683926 (Counterclockwise)

Preceding gene: 77456821

Following gene: 77456819

Centisome position: 10.64

GC content: 60.23

Gene sequence:

>948_bases
ATGACTGTGCGCTCCCTGCTTTGCCTCGCCCTGTTGCTGGGCACCACCCAAGCCTTTGCCGAGGCCACGAAGTACCCGCT
GACGATCCACAGCTGCAATCGCGAAGTGACCTTCAAGCAAGCGCCGAAACACGCGGTCAGTCACGACATCAACATGACCC
AGATGATGCTCGTCCTCGGCCTCAAATCGAAGATGGCCGGCTACAGCGGCGTCAGTGGCTGGAAATCGGTGACGCCTGAA
ATGCAGTCGCTGCTCGACGGTTTGCCGGAACTGGCGGCCAAGTACCCGTCGGTAGAAACCCTGCTCAACGCCAACGTCGA
TTTCTTCTTCGCCGGCTGGGATTACGGCATGCGCGTCGGTGGCGATCTCACCCCGCAGACCCTGCAACCGCTGGGCATCA
ACGTCTATGAGCTGACCGAGTCCTGCGCCTTCGTGATGAAACGCCCGGCCGCCACGCTGGACGACACTTACAACGACCTG
CGCAACCTCGGAAAGATTTTCGACGTGCAGGACCGTGCCAACGCATTGATCGCAGACATGCAAAGTCAGGTCGCGGAAAT
TCGCAAAGACCTGCCTGCCGAAAAACCACGGGTATTCCTGTACGACAGCGGCGAAGACCGCGCCATGACCTCCGGCCGCC
TCGGCATGCCGCAAGCGCTGATCGACGCCGCCGGCGGGCGCAACGTTCTCGATGACGTCGAAGCGAGCTGGACCCGGGTC
AATTGGGAAACCGTGGTCGAGCGCAATCCGCAGGTGATCGTGATCGTCGACTACAGCGAAATCACCGCCGAGCAGAAGAT
TGAATTCCTGCTGAAGAACAAGGCCCTGCAATCGGTGGACGCGATCAAGAACCAGCGCTTTATTGTCATCCCCTACGTGC
AGGCCACGCCGGGGATCGACAACGTGCTGGCGGTTGAAACCCTGGCCAAAGGGTTCCACGGCGAATGA

Upstream 100 bases:

>100_bases
TGCTCACCGTAGAACTGCTGCGCGACGTGTTCGGCGTCGAAGCATTGATCGATTCCCACCCCCTCCACGGCTACCCGCGA
ATCACCTGGATAACCCGACC

Downstream 100 bases:

>100_bases
TCGATCGTCGCTATGCGCTGCTGCTGATCGCCCTCGGTGCCGTGCTGCTGGTGTCGTGCGTGGTGTCGCTGGGCTTCGGC
CCGGCACGGGTGCCGGTGGA

Product: periplasmic binding protein

Products: NA

Alternate protein names: Iron Transport Lipoprotein; Vitamin; ABC Transporter; Iron ABC Transporter Periplasmic Protein; Iron ABC Transporter; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Fe3+ ABC Transporter Periplasmic Protein; Iron Compound ABC Transporter; Iron(III)-Siderophore ABC Transporter Periplasmic Subunit; Lipoprotein Involved In Iron Transport

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTVRSLLCLALLLGTTQAFAEATKYPLTIHSCNREVTFKQAPKHAVSHDINMTQMMLVLGLKSKMAGYSGVSGWKSVTPE
MQSLLDGLPELAAKYPSVETLLNANVDFFFAGWDYGMRVGGDLTPQTLQPLGINVYELTESCAFVMKRPAATLDDTYNDL
RNLGKIFDVQDRANALIADMQSQVAEIRKDLPAEKPRVFLYDSGEDRAMTSGRLGMPQALIDAAGGRNVLDDVEASWTRV
NWETVVERNPQVIVIVDYSEITAEQKIEFLLKNKALQSVDAIKNQRFIVIPYVQATPGIDNVLAVETLAKGFHGE

Sequences:

>Translated_315_residues
MTVRSLLCLALLLGTTQAFAEATKYPLTIHSCNREVTFKQAPKHAVSHDINMTQMMLVLGLKSKMAGYSGVSGWKSVTPE
MQSLLDGLPELAAKYPSVETLLNANVDFFFAGWDYGMRVGGDLTPQTLQPLGINVYELTESCAFVMKRPAATLDDTYNDL
RNLGKIFDVQDRANALIADMQSQVAEIRKDLPAEKPRVFLYDSGEDRAMTSGRLGMPQALIDAAGGRNVLDDVEASWTRV
NWETVVERNPQVIVIVDYSEITAEQKIEFLLKNKALQSVDAIKNQRFIVIPYVQATPGIDNVLAVETLAKGFHGE
>Mature_314_residues
TVRSLLCLALLLGTTQAFAEATKYPLTIHSCNREVTFKQAPKHAVSHDINMTQMMLVLGLKSKMAGYSGVSGWKSVTPEM
QSLLDGLPELAAKYPSVETLLNANVDFFFAGWDYGMRVGGDLTPQTLQPLGINVYELTESCAFVMKRPAATLDDTYNDLR
NLGKIFDVQDRANALIADMQSQVAEIRKDLPAEKPRVFLYDSGEDRAMTSGRLGMPQALIDAAGGRNVLDDVEASWTRVN
WETVVERNPQVIVIVDYSEITAEQKIEFLLKNKALQSVDAIKNQRFIVIPYVQATPGIDNVLAVETLAKGFHGE

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34804; Mature: 34673

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRSLLCLALLLGTTQAFAEATKYPLTIHSCNREVTFKQAPKHAVSHDINMTQMMLVLG
CCHHHHHHHHHHHHCHHHHHHHHCCCEEEECCCCEEEHHHCCHHHHHCCCCHHHHHHHHH
LKSKMAGYSGVSGWKSVTPEMQSLLDGLPELAAKYPSVETLLNANVDFFFAGWDYGMRVG
HHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCEECC
GDLTPQTLQPLGINVYELTESCAFVMKRPAATLDDTYNDLRNLGKIFDVQDRANALIADM
CCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QSQVAEIRKDLPAEKPRVFLYDSGEDRAMTSGRLGMPQALIDAAGGRNVLDDVEASWTRV
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCHHEEC
NWETVVERNPQVIVIVDYSEITAEQKIEFLLKNKALQSVDAIKNQRFIVIPYVQATPGID
CHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
NVLAVETLAKGFHGE
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVRSLLCLALLLGTTQAFAEATKYPLTIHSCNREVTFKQAPKHAVSHDINMTQMMLVLG
CHHHHHHHHHHHHCHHHHHHHHCCCEEEECCCCEEEHHHCCHHHHHCCCCHHHHHHHHH
LKSKMAGYSGVSGWKSVTPEMQSLLDGLPELAAKYPSVETLLNANVDFFFAGWDYGMRVG
HHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCEECC
GDLTPQTLQPLGINVYELTESCAFVMKRPAATLDDTYNDLRNLGKIFDVQDRANALIADM
CCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QSQVAEIRKDLPAEKPRVFLYDSGEDRAMTSGRLGMPQALIDAAGGRNVLDDVEASWTRV
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCHHEEC
NWETVVERNPQVIVIVDYSEITAEQKIEFLLKNKALQSVDAIKNQRFIVIPYVQATPGID
CHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
NVLAVETLAKGFHGE
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA