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The map label for this gene is yvrB [H]

Identifier: 77456819

GI number: 77456819

Start: 682919

End: 683929

Strand: Reverse

Name: yvrB [H]

Synonym: Pfl01_0591

Alternate gene names: 77456819

Gene position: 683929-682919 (Counterclockwise)

Preceding gene: 77456820

Following gene: 77456818

Centisome position: 10.62

GC content: 65.88

Gene sequence:

>1011_bases
ATGATCGATCGTCGCTATGCGCTGCTGCTGATCGCCCTCGGTGCCGTGCTGCTGGTGTCGTGCGTGGTGTCGCTGGGCTT
CGGCCCGGCACGGGTGCCGGTGGACGTTGTGTGGCGGATTCTGCTGCACAAACTGTTCGGCCTCGGCGCGCCGGACTGGA
GCGCCGGCCAGGAACACATCGTCTGGCTGATCCGCGTGCCGCGTATGTTGCTCGGTGCATTGGTCGGAGCCGGGCTGGCG
CTGATCGGCGCGGTACTGCAAGCGGTGACGCGCAATCCGCTGGCCGACCCGCACCTGCTTGGCGTCACCTCCGGCGCCAC
CCTCGGCGCAGTGATCGTGGTACTGCACATCGGTGAAATCGTCGGCCTGCTGACCTTGCCGATTGCCGCGTTCATCGGCG
CGTTGTTGAGCATGTTTCTGGTGCTGGGCATCGCCAACCGTCAGGGCCGGCTGGACAGTGATCGTCTGCTGCTGTGTGGC
GTGGCGGTGTCGTTCGTAATGATGGCGATCGCCAATCTGCTGCTGTTCATGGGCGATCACCGGGCCAGTTCGGCGGTGAT
GTTCTGGATGCTCGGTGGCCTCGGACTGGCCCGCTGGGAATTGTTGGCGGTGCCGGCGTTGAGCGTCCTGCTCGGATTGA
TTCTGCTGATCGGCATGGCCCGTCCGCTGAACGCCTTGATGGCCGGCGAACAGACCGCCGTCACCCTTGGCCTGAATGCC
CGGGCGGTGCGTCTGCGGGTGTTCGTGATTGCTTCGTTGATGACCGGAGTGCTGGTGTCGATCAGCGGCTCCATCGGCTT
TGTCGGGCTGATGGTGCCGCACATTGCCCGGCGCCTGATCGGTGCCGAGCATCGGCGTCTGCTGCCGGTGTGCGTGTTGC
TCGGCAGCGTTTTCCTCGTCTGGGTCGACGTCGCGGCGCGGACGCTGATCGCCCCCGAAGACCTGCCCATCGGCGTCGCT
ACCGCAGCCCTTGGCGGCCTGTTCTTCATCGGCCTGATGCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
TCAAGAACCAGCGCTTTATTGTCATCCCCTACGTGCAGGCCACGCCGGGGATCGACAACGTGCTGGCGGTTGAAACCCTG
GCCAAAGGGTTCCACGGCGA

Downstream 100 bases:

>100_bases
ATCCTCCGGGTGCGCCCCAACCTGGCGCACCCCGTTGCACCTTTGCATGCAACACGTCCCCTCATGGTGCGCCGCCTCCG
CGCGCGACCGCTCTAAACCG

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MIDRRYALLLIALGAVLLVSCVVSLGFGPARVPVDVVWRILLHKLFGLGAPDWSAGQEHIVWLIRVPRMLLGALVGAGLA
LIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHIGEIVGLLTLPIAAFIGALLSMFLVLGIANRQGRLDSDRLLLCG
VAVSFVMMAIANLLLFMGDHRASSAVMFWMLGGLGLARWELLAVPALSVLLGLILLIGMARPLNALMAGEQTAVTLGLNA
RAVRLRVFVIASLMTGVLVSISGSIGFVGLMVPHIARRLIGAEHRRLLPVCVLLGSVFLVWVDVAARTLIAPEDLPIGVA
TAALGGLFFIGLMRRR

Sequences:

>Translated_336_residues
MIDRRYALLLIALGAVLLVSCVVSLGFGPARVPVDVVWRILLHKLFGLGAPDWSAGQEHIVWLIRVPRMLLGALVGAGLA
LIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHIGEIVGLLTLPIAAFIGALLSMFLVLGIANRQGRLDSDRLLLCG
VAVSFVMMAIANLLLFMGDHRASSAVMFWMLGGLGLARWELLAVPALSVLLGLILLIGMARPLNALMAGEQTAVTLGLNA
RAVRLRVFVIASLMTGVLVSISGSIGFVGLMVPHIARRLIGAEHRRLLPVCVLLGSVFLVWVDVAARTLIAPEDLPIGVA
TAALGGLFFIGLMRRR
>Mature_336_residues
MIDRRYALLLIALGAVLLVSCVVSLGFGPARVPVDVVWRILLHKLFGLGAPDWSAGQEHIVWLIRVPRMLLGALVGAGLA
LIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHIGEIVGLLTLPIAAFIGALLSMFLVLGIANRQGRLDSDRLLLCG
VAVSFVMMAIANLLLFMGDHRASSAVMFWMLGGLGLARWELLAVPALSVLLGLILLIGMARPLNALMAGEQTAVTLGLNA
RAVRLRVFVIASLMTGVLVSISGSIGFVGLMVPHIARRLIGAEHRRLLPVCVLLGSVFLVWVDVAARTLIAPEDLPIGVA
TAALGGLFFIGLMRRR

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=304, Percent_Identity=35.1973684210526, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1790741, Length=280, Percent_Identity=36.0714285714286, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=38.9473684210526, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1786805, Length=278, Percent_Identity=35.2517985611511, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1786804, Length=269, Percent_Identity=30.8550185873606, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1786347, Length=348, Percent_Identity=29.3103448275862, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35464; Mature: 35464

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRRYALLLIALGAVLLVSCVVSLGFGPARVPVDVVWRILLHKLFGLGAPDWSAGQEHI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
VWLIRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHIGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
VGLLTLPIAAFIGALLSMFLVLGIANRQGRLDSDRLLLCGVAVSFVMMAIANLLLFMGDH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RASSAVMFWMLGGLGLARWELLAVPALSVLLGLILLIGMARPLNALMAGEQTAVTLGLNA
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCC
RAVRLRVFVIASLMTGVLVSISGSIGFVGLMVPHIARRLIGAEHRRLLPVCVLLGSVFLV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
WVDVAARTLIAPEDLPIGVATAALGGLFFIGLMRRR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDRRYALLLIALGAVLLVSCVVSLGFGPARVPVDVVWRILLHKLFGLGAPDWSAGQEHI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
VWLIRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHIGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
VGLLTLPIAAFIGALLSMFLVLGIANRQGRLDSDRLLLCGVAVSFVMMAIANLLLFMGDH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RASSAVMFWMLGGLGLARWELLAVPALSVLLGLILLIGMARPLNALMAGEQTAVTLGLNA
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCC
RAVRLRVFVIASLMTGVLVSISGSIGFVGLMVPHIARRLIGAEHRRLLPVCVLLGSVFLV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
WVDVAARTLIAPEDLPIGVATAALGGLFFIGLMRRR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]