| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is psiF [H]
Identifier: 77456802
GI number: 77456802
Start: 666587
End: 666892
Strand: Direct
Name: psiF [H]
Synonym: Pfl01_0574
Alternate gene names: 77456802
Gene position: 666587-666892 (Clockwise)
Preceding gene: 77456801
Following gene: 77456803
Centisome position: 10.35
GC content: 58.5
Gene sequence:
>306_bases ATGAAGATGTTGCGTGTCCCTTTGTTGATGATCGGTCTGCTGCTGTGCTCCCAGGGTTTCGCCGCCACGGCGCAACAGAA CAAAATGACCACCTGCAACGCCGACGCCACGGCCAAGAGCCTCAAGGGCGACGAGCGCAAAGCCTTCATGAGCACCTGCC TCAAGGCAGCCCCGGCGGCCAACGACGCCAAGGCCCTGACCCCGCAGCAACAGAAAATGAAAACCTGCAACGCCGATGCG GCCACCAAGGCGCTGACGGGTGATGCGCGCAAGACCTTCATGAGTGATTGTCTGAAGAAAAAATAA
Upstream 100 bases:
>100_bases GTATCGGCGCAGCCATCTTGAGGCTAGGAAGGTGTAACAAGCTTTGACTACACTCCAGCAGAGGCCACCTCCATCGAGGC GGCGCCAAGGAGAAAACTCC
Downstream 100 bases:
>100_bases AGCGGGTTTGAGTGGTGACCGGCAGATGTGTCCGGCTTGGGATCCAGGCCCTCACCCTAACCCTCTCCCAGAGGGAGAGG GGACCGATTCGGGGATGGCT
Product: PsiF
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKMLRVPLLMIGLLLCSQGFAATAQQNKMTTCNADATAKSLKGDERKAFMSTCLKAAPAANDAKALTPQQQKMKTCNADA ATKALTGDARKTFMSDCLKKK
Sequences:
>Translated_101_residues MKMLRVPLLMIGLLLCSQGFAATAQQNKMTTCNADATAKSLKGDERKAFMSTCLKAAPAANDAKALTPQQQKMKTCNADA ATKALTGDARKTFMSDCLKKK >Mature_101_residues MKMLRVPLLMIGLLLCSQGFAATAQQNKMTTCNADATAKSLKGDERKAFMSTCLKAAPAANDAKALTPQQQKMKTCNADA ATKALTGDARKTFMSDCLKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081731, Length=104, Percent_Identity=50, Blast_Score=96, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011690 [H]
Pfam domain/function: PF07769 PsiF_repeat [H]
EC number: NA
Molecular weight: Translated: 10817; Mature: 10817
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 11.9 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 11.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMLRVPLLMIGLLLCSQGFAATAQQNKMTTCNADATAKSLKGDERKAFMSTCLKAAPAA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCC NDAKALTPQQQKMKTCNADAATKALTGDARKTFMSDCLKKK CCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MKMLRVPLLMIGLLLCSQGFAATAQQNKMTTCNADATAKSLKGDERKAFMSTCLKAAPAA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCC NDAKALTPQQQKMKTCNADAATKALTGDARKTFMSDCLKKK CCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]