| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456803
Identifier: 77456803
GI number: 77456803
Start: 667241
End: 668254
Strand: Direct
Name: 77456803
Synonym: Pfl01_0575
Alternate gene names: NA
Gene position: 667241-668254 (Clockwise)
Preceding gene: 77456802
Following gene: 77456805
Centisome position: 10.36
GC content: 60.85
Gene sequence:
>1014_bases ATGCCAACGTTTTCTGAGCGTCATGTAGTGTTCTGGGTCAGTTGCATCATCATTTTCGGCGGTCTGTTGCTGGTGTTGCC ATTGCGTTTGCTGCCCAGTCTGCTGGCCGGATTGCTGGTGTTCGAACTGGTCAACATGCTCACCCCGCAACTGCAGCGGC TGATCGAAGGCCGCCGCGCGCGCTGGCTGGCGGTGGCGCTGCTGGGCACGCTGGTGGTAAGTGTGCTGACGCTGATCTTC GCTGGCGCCATCAGTTTCCTGCTGCATGAGGCGGAAAACCCTGGCGCTTCCCTCGACAAATTCATGGGCGTGGTCGACCG TGCGCGTGGACAGTTGCCGCCGTTCATCGACGCCTACCTGCCGGCCAGCGCTGCCGAATTCCGGGTGGCCATCGGTGAAT GGGCGAGCAAGCATTTGTCCGAACTGCAACTGGTGGGCAAGGACGCGGCGCATATGTTCGTGACCTTGCTGATCGGCATG GTGCTGGGCGCGATCATCGCCTTGCAGCGCGTGCCGGACGTCACCAAGCGCAAGCCGCTGGCGGCCGCACTGTTCGACCG TCTGCACCTGCTGGTTCAGGCGTTTCGCAACATCGTGTTCGCGCAGATCAAGATTTCCCTGCTCAACACCTTCTTCACCG GGATCTTCCTGGCGGTGGTCCTGCCGCTGTTCGGGATCAAGCTGCCGCTGACCAAGACCCTGATCGTGCTGACCTTCCTG CTCGGTCTGCTACCGGTGATCGGCAACCTGATGTCGAACACGCTGATCACTATCGTCGGCCTGTCGCTGTCGATCTGGGT GGCGATTGCGGCGTTGGGTTACCTGATCTTTATCCACAAGCTGGAATACTTTCTCAACGCGCGCATCGTCGGCGGGCAGA TCAGTGCCAAGTCCTGGGAGTTGCTGCTGGCGATGCTGGTGTTCGAGGCCGCGTTCGGCCTGCCGGGGGTGGTGGCGGGG CCGATCTATTACGCGTATCTGAAGAGTGAGTTGAAGCTGGGCGGGATGGTTTAG
Upstream 100 bases:
>100_bases CAAGCCGAGCCCCAAACCTACAAACACCGCATATCCCTAGTGCTCCCCAGGGATCGCTGGCAGACTGCCAATCCTTTTAC GCCGTTCGTTTTGAGGCTGT
Downstream 100 bases:
>100_bases TAGGTGATCGTTCCCACGTCGAGGCGTCGAACCGTCTGCCTGGGAATGCATCCCGTGACGCTCCGCGTCACAGCTTCAAC AGCGGACGCAGAGCGTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MPTFSERHVVFWVSCIIIFGGLLLVLPLRLLPSLLAGLLVFELVNMLTPQLQRLIEGRRARWLAVALLGTLVVSVLTLIF AGAISFLLHEAENPGASLDKFMGVVDRARGQLPPFIDAYLPASAAEFRVAIGEWASKHLSELQLVGKDAAHMFVTLLIGM VLGAIIALQRVPDVTKRKPLAAALFDRLHLLVQAFRNIVFAQIKISLLNTFFTGIFLAVVLPLFGIKLPLTKTLIVLTFL LGLLPVIGNLMSNTLITIVGLSLSIWVAIAALGYLIFIHKLEYFLNARIVGGQISAKSWELLLAMLVFEAAFGLPGVVAG PIYYAYLKSELKLGGMV
Sequences:
>Translated_337_residues MPTFSERHVVFWVSCIIIFGGLLLVLPLRLLPSLLAGLLVFELVNMLTPQLQRLIEGRRARWLAVALLGTLVVSVLTLIF AGAISFLLHEAENPGASLDKFMGVVDRARGQLPPFIDAYLPASAAEFRVAIGEWASKHLSELQLVGKDAAHMFVTLLIGM VLGAIIALQRVPDVTKRKPLAAALFDRLHLLVQAFRNIVFAQIKISLLNTFFTGIFLAVVLPLFGIKLPLTKTLIVLTFL LGLLPVIGNLMSNTLITIVGLSLSIWVAIAALGYLIFIHKLEYFLNARIVGGQISAKSWELLLAMLVFEAAFGLPGVVAG PIYYAYLKSELKLGGMV >Mature_336_residues PTFSERHVVFWVSCIIIFGGLLLVLPLRLLPSLLAGLLVFELVNMLTPQLQRLIEGRRARWLAVALLGTLVVSVLTLIFA GAISFLLHEAENPGASLDKFMGVVDRARGQLPPFIDAYLPASAAEFRVAIGEWASKHLSELQLVGKDAAHMFVTLLIGMV LGAIIALQRVPDVTKRKPLAAALFDRLHLLVQAFRNIVFAQIKISLLNTFFTGIFLAVVLPLFGIKLPLTKTLIVLTFLL GLLPVIGNLMSNTLITIVGLSLSIWVAIAALGYLIFIHKLEYFLNARIVGGQISAKSWELLLAMLVFEAAFGLPGVVAGP IYYAYLKSELKLGGMV
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36776; Mature: 36645
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFSERHVVFWVSCIIIFGGLLLVLPLRLLPSLLAGLLVFELVNMLTPQLQRLIEGRRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWLAVALLGTLVVSVLTLIFAGAISFLLHEAENPGASLDKFMGVVDRARGQLPPFIDAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHC PASAAEFRVAIGEWASKHLSELQLVGKDAAHMFVTLLIGMVLGAIIALQRVPDVTKRKPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH AAALFDRLHLLVQAFRNIVFAQIKISLLNTFFTGIFLAVVLPLFGIKLPLTKTLIVLTFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGLLPVIGNLMSNTLITIVGLSLSIWVAIAALGYLIFIHKLEYFLNARIVGGQISAKSWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLLAMLVFEAAFGLPGVVAGPIYYAYLKSELKLGGMV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTFSERHVVFWVSCIIIFGGLLLVLPLRLLPSLLAGLLVFELVNMLTPQLQRLIEGRRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWLAVALLGTLVVSVLTLIFAGAISFLLHEAENPGASLDKFMGVVDRARGQLPPFIDAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHC PASAAEFRVAIGEWASKHLSELQLVGKDAAHMFVTLLIGMVLGAIIALQRVPDVTKRKPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH AAALFDRLHLLVQAFRNIVFAQIKISLLNTFFTGIFLAVVLPLFGIKLPLTKTLIVLTFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGLLPVIGNLMSNTLITIVGLSLSIWVAIAALGYLIFIHKLEYFLNARIVGGQISAKSWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLLAMLVFEAAFGLPGVVAGPIYYAYLKSELKLGGMV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA