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The map label for this gene is yeaM [H]

Identifier: 77456801

GI number: 77456801

Start: 665729

End: 666523

Strand: Direct

Name: yeaM [H]

Synonym: Pfl01_0573

Alternate gene names: 77456801

Gene position: 665729-666523 (Clockwise)

Preceding gene: 77456799

Following gene: 77456802

Centisome position: 10.34

GC content: 62.52

Gene sequence:

>795_bases
ATGAACAGTAAACACATCGATCTGCTGGATTTCAGCGAACTGCCGTCGGCGGTGTATTTCCGCTATGCCGACTTCAACGC
CCATGAATACGCCGCGCCGCACCGCCATCCGTGGGGCACGCTGGAGTACGCGGCCCACGGCGTGCTGCACATGGATGTCG
ACGGCAGCCGCTTCATGTCGCCGCCGCAATACGCGGTGTGGGTGCCGCCGCAGGTCGAGCACAGTTTCTACAGTCATCAG
CCGGTCAATTATCGGGCGGTGTGCCTGGCGCCGGATGTGTGTTCCGATTTGCCGGCGCAGGCCTGCACCCTGGCGATCAG
CGACATTCTCAAGGCGATCCTCAAGGACTTCGCCGCCCGCGATGTGAAGATCCCGGCGTTCGAAGCCGACCAGCGCCTGG
CCCAGGTGCTGGTGGATCAATTGCGCCAGGCCCCGGTTCATCAATGCTATTTGCCTTACGCCAGCAGCCCCGGTTTGCTG
ACCATTCTCGAAACCCTACAGGCCGAACCTGGCAATAATGAACCGCTGGCGCATTGGGCGGCGCAGGTGCATGTCAGCGA
GCGCACGCTGGCCCGGCAGTTCGTGCGGGAGCTGGGGATGAGTTTCGGCGAGTGGCGTCAGCGCCTGCGGTATCTCGTGG
CCATCGAGGCGCTGGAAAGTTCGCGCAGTGTGCAGGAAATCGCCTTCGATCTCGGCTACAGCAGCGGTTCGGCCTTCATC
GCCATGTTTGCCCGGCAGGCCGGATGTACCCCGGAGCAGTATCGGCGCAGCCATCTTGAGGCTAGGAAGGTGTAA

Upstream 100 bases:

>100_bases
ATGGGAGGAGAAACCAGTACGTTGATGAACGGTGATTATCCCCTGTCTGGATGCAGGCCTATACTGCGAACCGGACAACC
CGCCCCTGATTCCGGACAGC

Downstream 100 bases:

>100_bases
CAAGCTTTGACTACACTCCAGCAGAGGCCACCTCCATCGAGGCGGCGCCAAGGAGAAAACTCCATGAAGATGTTGCGTGT
CCCTTTGTTGATGATCGGTC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNSKHIDLLDFSELPSAVYFRYADFNAHEYAAPHRHPWGTLEYAAHGVLHMDVDGSRFMSPPQYAVWVPPQVEHSFYSHQ
PVNYRAVCLAPDVCSDLPAQACTLAISDILKAILKDFAARDVKIPAFEADQRLAQVLVDQLRQAPVHQCYLPYASSPGLL
TILETLQAEPGNNEPLAHWAAQVHVSERTLARQFVRELGMSFGEWRQRLRYLVAIEALESSRSVQEIAFDLGYSSGSAFI
AMFARQAGCTPEQYRRSHLEARKV

Sequences:

>Translated_264_residues
MNSKHIDLLDFSELPSAVYFRYADFNAHEYAAPHRHPWGTLEYAAHGVLHMDVDGSRFMSPPQYAVWVPPQVEHSFYSHQ
PVNYRAVCLAPDVCSDLPAQACTLAISDILKAILKDFAARDVKIPAFEADQRLAQVLVDQLRQAPVHQCYLPYASSPGLL
TILETLQAEPGNNEPLAHWAAQVHVSERTLARQFVRELGMSFGEWRQRLRYLVAIEALESSRSVQEIAFDLGYSSGSAFI
AMFARQAGCTPEQYRRSHLEARKV
>Mature_264_residues
MNSKHIDLLDFSELPSAVYFRYADFNAHEYAAPHRHPWGTLEYAAHGVLHMDVDGSRFMSPPQYAVWVPPQVEHSFYSHQ
PVNYRAVCLAPDVCSDLPAQACTLAISDILKAILKDFAARDVKIPAFEADQRLAQVLVDQLRQAPVHQCYLPYASSPGLL
TILETLQAEPGNNEPLAHWAAQVHVSERTLARQFVRELGMSFGEWRQRLRYLVAIEALESSRSVQEIAFDLGYSSGSAFI
AMFARQAGCTPEQYRRSHLEARKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=227, Percent_Identity=37.8854625550661, Blast_Score=140, Evalue=9e-35,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 29770; Mature: 29770

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKHIDLLDFSELPSAVYFRYADFNAHEYAAPHRHPWGTLEYAAHGVLHMDVDGSRFMS
CCCCCCCCCCHHHCCHHHEEEEECCCCHHCCCCCCCCCCCHHHHHCCEEEEECCCHHCCC
PPQYAVWVPPQVEHSFYSHQPVNYRAVCLAPDVCSDLPAQACTLAISDILKAILKDFAAR
CCCEEEECCCCHHHHHCCCCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DVKIPAFEADQRLAQVLVDQLRQAPVHQCYLPYASSPGLLTILETLQAEPGNNEPLAHWA
CCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHH
AQVHVSERTLARQFVRELGMSFGEWRQRLRYLVAIEALESSRSVQEIAFDLGYSSGSAFI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHH
AMFARQAGCTPEQYRRSHLEARKV
HHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSKHIDLLDFSELPSAVYFRYADFNAHEYAAPHRHPWGTLEYAAHGVLHMDVDGSRFMS
CCCCCCCCCCHHHCCHHHEEEEECCCCHHCCCCCCCCCCCHHHHHCCEEEEECCCHHCCC
PPQYAVWVPPQVEHSFYSHQPVNYRAVCLAPDVCSDLPAQACTLAISDILKAILKDFAAR
CCCEEEECCCCHHHHHCCCCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DVKIPAFEADQRLAQVLVDQLRQAPVHQCYLPYASSPGLLTILETLQAEPGNNEPLAHWA
CCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHH
AQVHVSERTLARQFVRELGMSFGEWRQRLRYLVAIEALESSRSVQEIAFDLGYSSGSAFI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHH
AMFARQAGCTPEQYRRSHLEARKV
HHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]