Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yyaM [H]

Identifier: 77456800

GI number: 77456800

Start: 664737

End: 665630

Strand: Reverse

Name: yyaM [H]

Synonym: Pfl01_0572

Alternate gene names: 77456800

Gene position: 665630-664737 (Counterclockwise)

Preceding gene: 77456804

Following gene: 77456796

Centisome position: 10.34

GC content: 63.65

Gene sequence:

>894_bases
ATGCAATACGCGTTTCCCCTGCTGGCGATTTTCATCTGGGCCGGCAACACCGTGATCAACAAGCTTGCGGTCGGTGCGAT
CTTCCCCGCCGAGATCGGCTTCTATCGCTGGCTGCTCGCCGGCCTGCTGTTCACGCCGTTCATGCTCAAGAAAGTGATCG
CGCACTGGCCGCAGATTCGCCCGAACCTGGGCAAGATTTTCATCCTCGGCGTGCTCGGCATGGCGGTCTATCAGAGCCTG
GCCTACTTCGCCGCGACCCTGACCAGCGCCACCAACATGGGCATCATCCTGTCGCTGATGCCGTTGATGTCGCTGGCCAT
GGCGATCATCAGCCTCGGCCAGCAACTGACTGCCGGTGCGCTGGTCGGTGCGGTGCTGTCGTTCGCCGGTGTGCTGGTGG
TGGTGTCGTCCGGCAGCCTCGGCGCTTTGCTGCAACACGGGGTGAACCTGGGTGACGCGATGATGCTGATCGCCACCCTC
GCCTATGCGATCTACAGCACCCTGCTGAAAAAATGGCAGCTGCGCCTGCCGCCGCTGGTGTTGCTGTATTTGCAGGTGCT
GGTGGCGGTGGTGGTGCTGTTTCCGCTGTACGCCGCGTCGCCGAAAACCGGCCTGACTCTGCAGAACATTCCGCTGGTGT
TGTACGCGTGCCTGCTGGCCTCGATGCTCGCGCCGCTGGCCTGGATGCAGGCCGTACAGCGCCTGGGCCCGAGCCGGACC
ACGCTGTTCTTCAACCTGCTGCCGCTGATCACCGCGCTGATTGCCGCGGTGGTGCTGAAGGAACAACTGGCGTTGTATCA
CCTGGTCGGTGGCTTGCTGACGCTGGGCGGGGTGATTCTTTCCGAGCGCTGGACCACCGTCCTCGGTCGCTCCCGCACTC
CGAGCGCCGCCTAG

Upstream 100 bases:

>100_bases
ATGCTGTCCGGAATCAGGGGCGGGTTGTCCGGTTCGCAGTATAGGCCTGCATCCAGACAGGGGATAATCACCGTTCATCA
ACGTACTGGTTTCTCCTCCC

Downstream 100 bases:

>100_bases
ACCCCGGCGGCTTTCAACCGCGCGGCGTGCTCGACGAACAGCCGCACCGGATCCGCGCCTTTGCCAACCAGTCCCAGCGA
CTGGTTGACGATGTCGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQYAFPLLAIFIWAGNTVINKLAVGAIFPAEIGFYRWLLAGLLFTPFMLKKVIAHWPQIRPNLGKIFILGVLGMAVYQSL
AYFAATLTSATNMGIILSLMPLMSLAMAIISLGQQLTAGALVGAVLSFAGVLVVVSSGSLGALLQHGVNLGDAMMLIATL
AYAIYSTLLKKWQLRLPPLVLLYLQVLVAVVVLFPLYAASPKTGLTLQNIPLVLYACLLASMLAPLAWMQAVQRLGPSRT
TLFFNLLPLITALIAAVVLKEQLALYHLVGGLLTLGGVILSERWTTVLGRSRTPSAA

Sequences:

>Translated_297_residues
MQYAFPLLAIFIWAGNTVINKLAVGAIFPAEIGFYRWLLAGLLFTPFMLKKVIAHWPQIRPNLGKIFILGVLGMAVYQSL
AYFAATLTSATNMGIILSLMPLMSLAMAIISLGQQLTAGALVGAVLSFAGVLVVVSSGSLGALLQHGVNLGDAMMLIATL
AYAIYSTLLKKWQLRLPPLVLLYLQVLVAVVVLFPLYAASPKTGLTLQNIPLVLYACLLASMLAPLAWMQAVQRLGPSRT
TLFFNLLPLITALIAAVVLKEQLALYHLVGGLLTLGGVILSERWTTVLGRSRTPSAA
>Mature_297_residues
MQYAFPLLAIFIWAGNTVINKLAVGAIFPAEIGFYRWLLAGLLFTPFMLKKVIAHWPQIRPNLGKIFILGVLGMAVYQSL
AYFAATLTSATNMGIILSLMPLMSLAMAIISLGQQLTAGALVGAVLSFAGVLVVVSSGSLGALLQHGVNLGDAMMLIATL
AYAIYSTLLKKWQLRLPPLVLLYLQVLVAVVVLFPLYAASPKTGLTLQNIPLVLYACLLASMLAPLAWMQAVQRLGPSRT
TLFFNLLPLITALIAAVVLKEQLALYHLVGGLLTLGGVILSERWTTVLGRSRTPSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31831; Mature: 31831

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYAFPLLAIFIWAGNTVINKLAVGAIFPAEIGFYRWLLAGLLFTPFMLKKVIAHWPQIR
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNLGKIFILGVLGMAVYQSLAYFAATLTSATNMGIILSLMPLMSLAMAIISLGQQLTAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGAVLSFAGVLVVVSSGSLGALLQHGVNLGDAMMLIATLAYAIYSTLLKKWQLRLPPLV
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLYLQVLVAVVVLFPLYAASPKTGLTLQNIPLVLYACLLASMLAPLAWMQAVQRLGPSRT
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TLFFNLLPLITALIAAVVLKEQLALYHLVGGLLTLGGVILSERWTTVLGRSRTPSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQYAFPLLAIFIWAGNTVINKLAVGAIFPAEIGFYRWLLAGLLFTPFMLKKVIAHWPQIR
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNLGKIFILGVLGMAVYQSLAYFAATLTSATNMGIILSLMPLMSLAMAIISLGQQLTAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGAVLSFAGVLVVVSSGSLGALLQHGVNLGDAMMLIATLAYAIYSTLLKKWQLRLPPLV
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLYLQVLVAVVVLFPLYAASPKTGLTLQNIPLVLYACLLASMLAPLAWMQAVQRLGPSRT
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TLFFNLLPLITALIAAVVLKEQLALYHLVGGLLTLGGVILSERWTTVLGRSRTPSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]