| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cysC [H]
Identifier: 77456711
GI number: 77456711
Start: 560254
End: 560865
Strand: Direct
Name: cysC [H]
Synonym: Pfl01_0483
Alternate gene names: 77456711
Gene position: 560254-560865 (Clockwise)
Preceding gene: 77456710
Following gene: 77456712
Centisome position: 8.7
GC content: 63.89
Gene sequence:
>612_bases ATGAATGAGGCGCTGCACAGTCTGGCGACAACGCCCGCCATCAGCCCCTATAACCTGGCGCTGCCGCGCCAGGCCCGGGC CGCGCTCAACGGGCAGCGGCCGCGTTGCCTGTGGCTGACCGGATTATCCGGCGCCGGCAAGTCGACCCTGGCCAATTCGC TGGAGCTGCACCTGCATCAATTCGGGCGGCACACCTTTCTGCTCGATGGCGACAACGTGCGCAATGGCCTGTGCCGGGAC CTGGGTATGGACGATGCCGGTCGCCGGGAAAACATCCGGCGCATGGCCGAAGTCGCCCGGCTGATGGTCGATGCCGGGCT GATCGTCATCGTTGCGGCGATTTCCCCGTTTCGAGCCGAACGGGATGCTGCGCGGCGACTGTTTGCCGAGGGCGACTTCG TCGAAGTGCATGTGAGCACTTCGCTCACGGTGTGCGAGCGCCGTGATCCGAAAGGTTTGTATCAGGCGGTGCGTCAGGGT CGTATCCAGCATTTCACGGGCATCGACAGTCCTTACGAGGCTCCGCTGGCGGCGGAATGCCGTATCGACACGGAAGAGAT CGAGCCAAGCGAGGCCTGCGAACGGCTGGCGGCTTTGCTGCTTGAAAAATGA
Upstream 100 bases:
>100_bases TCGCGGCAACGTCAACCACTGAAGGCGCGGGAGTTCTGCTCGGCGCGAACCCGTCGGCTGGTGCGTCGGGCCTATCAGCG CGACTACGAGTTGCTCGGTT
Downstream 100 bases:
>100_bases GCAAAAAAGCCAGCTGTTTCATCCTGTTGCAGCCACCGCACAAGCCTTCGCCAACCCTGTGTTAATATCGCGCCCCTGTT CATTTTGTATGTGGGTTGCT
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNEALHSLATTPAISPYNLALPRQARAALNGQRPRCLWLTGLSGAGKSTLANSLELHLHQFGRHTFLLDGDNVRNGLCRD LGMDDAGRRENIRRMAEVARLMVDAGLIVIVAAISPFRAERDAARRLFAEGDFVEVHVSTSLTVCERRDPKGLYQAVRQG RIQHFTGIDSPYEAPLAAECRIDTEEIEPSEACERLAALLLEK
Sequences:
>Translated_203_residues MNEALHSLATTPAISPYNLALPRQARAALNGQRPRCLWLTGLSGAGKSTLANSLELHLHQFGRHTFLLDGDNVRNGLCRD LGMDDAGRRENIRRMAEVARLMVDAGLIVIVAAISPFRAERDAARRLFAEGDFVEVHVSTSLTVCERRDPKGLYQAVRQG RIQHFTGIDSPYEAPLAAECRIDTEEIEPSEACERLAALLLEK >Mature_203_residues MNEALHSLATTPAISPYNLALPRQARAALNGQRPRCLWLTGLSGAGKSTLANSLELHLHQFGRHTFLLDGDNVRNGLCRD LGMDDAGRRENIRRMAEVARLMVDAGLIVIVAAISPFRAERDAARRLFAEGDFVEVHVSTSLTVCERRDPKGLYQAVRQG RIQHFTGIDSPYEAPLAAECRIDTEEIEPSEACERLAALLLEK
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=182, Percent_Identity=45.0549450549451, Blast_Score=154, Evalue=7e-38, Organism=Homo sapiens, GI62912492, Length=182, Percent_Identity=45.0549450549451, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI34447231, Length=182, Percent_Identity=45.0549450549451, Blast_Score=149, Evalue=2e-36, Organism=Escherichia coli, GI1789107, Length=164, Percent_Identity=57.9268292682927, Blast_Score=195, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17542422, Length=170, Percent_Identity=50, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6322852, Length=184, Percent_Identity=45.6521739130435, Blast_Score=156, Evalue=2e-39, Organism=Drosophila melanogaster, GI24667032, Length=172, Percent_Identity=44.7674418604651, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI24667028, Length=172, Percent_Identity=44.7674418604651, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI24667036, Length=172, Percent_Identity=44.7674418604651, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI116007838, Length=172, Percent_Identity=44.7674418604651, Blast_Score=148, Evalue=2e-36, Organism=Drosophila melanogaster, GI24667044, Length=172, Percent_Identity=44.7674418604651, Blast_Score=148, Evalue=2e-36, Organism=Drosophila melanogaster, GI24667040, Length=172, Percent_Identity=44.7674418604651, Blast_Score=148, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 22414; Mature: 22414
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEALHSLATTPAISPYNLALPRQARAALNGQRPRCLWLTGLSGAGKSTLANSLELHLHQ CCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH FGRHTFLLDGDNVRNGLCRDLGMDDAGRRENIRRMAEVARLMVDAGLIVIVAAISPFRAE CCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH RDAARRLFAEGDFVEVHVSTSLTVCERRDPKGLYQAVRQGRIQHFTGIDSPYEAPLAAEC HHHHHHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCEEEE RIDTEEIEPSEACERLAALLLEK ECCHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNEALHSLATTPAISPYNLALPRQARAALNGQRPRCLWLTGLSGAGKSTLANSLELHLHQ CCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH FGRHTFLLDGDNVRNGLCRDLGMDDAGRRENIRRMAEVARLMVDAGLIVIVAAISPFRAE CCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH RDAARRLFAEGDFVEVHVSTSLTVCERRDPKGLYQAVRQGRIQHFTGIDSPYEAPLAAEC HHHHHHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCEEEE RIDTEEIEPSEACERLAALLLEK ECCHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]