| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456710
Identifier: 77456710
GI number: 77456710
Start: 559557
End: 560261
Strand: Direct
Name: 77456710
Synonym: Pfl01_0482
Alternate gene names: NA
Gene position: 559557-560261 (Clockwise)
Preceding gene: 77456709
Following gene: 77456711
Centisome position: 8.69
GC content: 58.72
Gene sequence:
>705_bases ATGCTGCAACGTTATCTCTGGAAATTGCTGCCCAAGCCGCAGCGGGCCTTTTTGCTGGGGCGTCTGTCGGTGGTTGACCG GCAAGTGGTGAACAAATCGATGTCGGCCAGTCTGGCCTTTCCTGCCGCCTTCGAGCAGCGCGACTGTCTGTTTATCCACG TACCCAAATGCGCCGGAAGCAGCTTGTGTGCGGCGATGTTCGACGGCTGGCGTCCCGGACACTTGCCGTTGTACTGGTAC GAAGAGCAATTTCCCGAGCAATATGCCGCCGCCTACAAATTCGCCTTTGTGCGCGACCCGCTGGAGCGCGCCTATTCGGC GTACGCCTTTTTGCATGGCAACACCTTGAGCGGGCGTGATCACGCCGCTCAGCAGATGGTTCGACAATATCGGGATTTCG ACGATTTTGTCGCACGCTGGCTGCATCCGGAGACGATCTCGCGGCAGCTGCACTTTGCCGCACAGACCGACTTTCTCACC GACTCGCTGGGGCATCTGGCTCTGGATTTCATCGGTTACCAGGAACATCTGGAACAGGATTTCAAACAGGTCTGTGACCG CTTGGGGATGGTGTGTCAGTTGCCGCACGTCAACAGCTCGCGGCAACGTCAACCACTGAAGGCGCGGGAGTTCTGCTCGG CGCGAACCCGTCGGCTGGTGCGTCGGGCCTATCAGCGCGACTACGAGTTGCTCGGTTATGAATGA
Upstream 100 bases:
>100_bases TTGACCAAACCGGCATAAAACCCGGCATCGCGCTTGTTAAGGTTCCTGAACGAACTCTGACTTCAATCGAAGGGGCCATC CTCTTCGCGCGGGTGCTGGC
Downstream 100 bases:
>100_bases GGCGCTGCACAGTCTGGCGACAACGCCCGCCATCAGCCCCTATAACCTGGCGCTGCCGCGCCAGGCCCGGGCCGCGCTCA ACGGGCAGCGGCCGCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLQRYLWKLLPKPQRAFLLGRLSVVDRQVVNKSMSASLAFPAAFEQRDCLFIHVPKCAGSSLCAAMFDGWRPGHLPLYWY EEQFPEQYAAAYKFAFVRDPLERAYSAYAFLHGNTLSGRDHAAQQMVRQYRDFDDFVARWLHPETISRQLHFAAQTDFLT DSLGHLALDFIGYQEHLEQDFKQVCDRLGMVCQLPHVNSSRQRQPLKAREFCSARTRRLVRRAYQRDYELLGYE
Sequences:
>Translated_234_residues MLQRYLWKLLPKPQRAFLLGRLSVVDRQVVNKSMSASLAFPAAFEQRDCLFIHVPKCAGSSLCAAMFDGWRPGHLPLYWY EEQFPEQYAAAYKFAFVRDPLERAYSAYAFLHGNTLSGRDHAAQQMVRQYRDFDDFVARWLHPETISRQLHFAAQTDFLT DSLGHLALDFIGYQEHLEQDFKQVCDRLGMVCQLPHVNSSRQRQPLKAREFCSARTRRLVRRAYQRDYELLGYE >Mature_234_residues MLQRYLWKLLPKPQRAFLLGRLSVVDRQVVNKSMSASLAFPAAFEQRDCLFIHVPKCAGSSLCAAMFDGWRPGHLPLYWY EEQFPEQYAAAYKFAFVRDPLERAYSAYAFLHGNTLSGRDHAAQQMVRQYRDFDDFVARWLHPETISRQLHFAAQTDFLT DSLGHLALDFIGYQEHLEQDFKQVCDRLGMVCQLPHVNSSRQRQPLKAREFCSARTRRLVRRAYQRDYELLGYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27435; Mature: 27435
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRYLWKLLPKPQRAFLLGRLSVVDRQVVNKSMSASLAFPAAFEQRDCLFIHVPKCAGS CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCH SLCAAMFDGWRPGHLPLYWYEEQFPEQYAAAYKFAFVRDPLERAYSAYAFLHGNTLSGRD HHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH HAAQQMVRQYRDFDDFVARWLHPETISRQLHFAAQTDFLTDSLGHLALDFIGYQEHLEQD HHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKQVCDRLGMVCQLPHVNSSRQRQPLKAREFCSARTRRLVRRAYQRDYELLGYE HHHHHHHHCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCC >Mature Secondary Structure MLQRYLWKLLPKPQRAFLLGRLSVVDRQVVNKSMSASLAFPAAFEQRDCLFIHVPKCAGS CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCH SLCAAMFDGWRPGHLPLYWYEEQFPEQYAAAYKFAFVRDPLERAYSAYAFLHGNTLSGRD HHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH HAAQQMVRQYRDFDDFVARWLHPETISRQLHFAAQTDFLTDSLGHLALDFIGYQEHLEQD HHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKQVCDRLGMVCQLPHVNSSRQRQPLKAREFCSARTRRLVRRAYQRDYELLGYE HHHHHHHHCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA