Click here to switch to the map view.

The map label for this gene is aidB [C]

Identifier: 77456679

GI number: 77456679

Start: 512653

End: 514455

Strand: Reverse

Name: aidB [C]

Synonym: Pfl01_0451

Alternate gene names: 77456679

Gene position: 514455-512653 (Counterclockwise)

Preceding gene: 77456680

Following gene: 77456675

Centisome position: 7.99

GC content: 61.9

Gene sequence:

>1803_bases
ATGTCCGAGACGCTGCTCAGTTCCCGCAATCTGGCTTTCGAGCTGTACGAAGTCCTCGATGCCGAGGGCCTGACCCGGCG
CGAGCGGTTTGCCGAGCACAACCGCGAAACCTTCGATGCCGCCATCGGCACGGCGCGCAACATCGCCGAGAAGTACTTCG
CACCGCACAACCGCAAGGGCGACGAGAACGAGCCGCGCTACGAGAACGGTCAGGCAATTCTGATTCCCGAGGTGAAACCG
GCGGTGGATGCGTTCCTCGAAGCCGGATTCCTCAACGCGGCGCGCAGTTTCGACGCCGGCGGCATGCAACTTCCCACACT
GTTGTCCCAGGCCTGCTTCGCCCACTTCCAGTCAGCCAACGCGGCGTCGACCTCCTATCCGTTCCTGACCATGGGTGCGG
CCAACCTGATCGAAAGTTTCGGCACCGAAGAGCAGAAGCAACGCTTCCTTCAACCGATGATCGACGGCCGTTTCTTCGGC
ACCATGGCCCTGACCGAGCCCCATGCCGGTTCGTCGCTGTCGGATATTCGTACCCGAGCCGAGCCTGCGTCCGACGGCAC
TTATCGCCTCAAGGGCAACAAGATCTTCATCTCCGGCGGTGACCACCCGCTCTCGGAAAACATCGTGCACATGGTGCTGG
CCAAGCTGCCGGACGCGCCGGCCGGGGTGAAAGGTATTTCACTGTTCATCGTGCCGAAGTTTCTGGTCAACGATGACGGC
AGCCTGGGCAAGCGCAACGACGTGCTGCTGGCCGGGCTGTTCCACAAGATGGGCTGGCGCGGAACGACGTCCACGGCGCT
GAACTTCGGCGATAACGGTGAGTGCGTCGGTTATCTGGTGGGCAAGCCGCATCACGGCTTGAGCTACATGTTCCAGATGA
TGAACGAAGCTCGGATCGGTGTCGGCATGGGCGCGGTGATGCTCGGTTACGCCGGTTACCTGTACTCGCTGGAATACGCC
CGCGAACGGCCGCAGGGTCGGGTGCCGGACAGCAAGGACCCGACGACGGCGCCGGTGGCGATCATTCAGCACGCGGACGT
CAGACGCATGCTGCTGACACAGAAATCCTACGTTGAAGGGGCGTTCGATCTCGGTCTGTATGCGGCGCGCCTGTTCGATG
ACACCACCACGCTGGAGATCGAAGCCGAGCGCAAACAGGCTCACGAGCTATTGGATTTGCTGACGCCGATCGTCAAATCC
TGGCCGTCCGAGTTCTGCCTGAAGGCCAACGAACTGGCGATCCAGATTCTCGGCGGCCACGGTTACACCCGCGAATACCC
GGTGGAGCAGTACTACCGCGACAATCGCCTGAACCCGATCCACGAAGGCACTCACGGCATTCAGTCGCTGGACTTGCTGG
GACGCAAACTGGCGCAGAACGGTGGTGCCGGGCTCAAGCAACTGATTCGCCTGATCGCCAACACCGCCGAGCGCGCAGTC
CCGTACGAATCCTTGACCGCACTGCGTGAGCCGTTGGAGAAACTGGTGGCGCGCTTGCAGAGCGTGACCATTGGTCTGCT
GACCGACCTGGCTCAGGGCAAGGTCAACAGCAGCCTGGCGAACTCGGCGTTGTACCTGAAGGTGTTCGGGCATGCGGTGA
TTGGCTGGCGCTGGCTGGAGCAGGCGATTCGGGCGGAGGAAGGGTTGGCCAAAGGCAATGCGGCGGATGCCGACTTCTAT
AAGGGCAAGTTGCAGGCGGCGCGGTATTTCCTGACGTGGGAAGTGCCGGGCTGCCAGCATGAGCTGACGTTGCTGGAGGC
GCGGGATGATACGTGTCTGGCAATGCAGGATGCGTGGTTCTGA

Upstream 100 bases:

>100_bases
CGCCCATTTTTTTGGCCTCTCCATCACCGTTATCAATCTTCCTGTTCAGCCTTTATTCGCACGCCTAGACTCGGTTCATT
CCAAAAAAAGGTAGGCCGCC

Downstream 100 bases:

>100_bases
TCCCACGGTGATCGTTAGCGATCGTTCCCACGCAGAGCGTGGGAACGATCAATCTGACGACACATCAGCTCAACTTGAAC
CCACCCATCTGCCGCGCCAG

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MSETLLSSRNLAFELYEVLDAEGLTRRERFAEHNRETFDAAIGTARNIAEKYFAPHNRKGDENEPRYENGQAILIPEVKP
AVDAFLEAGFLNAARSFDAGGMQLPTLLSQACFAHFQSANAASTSYPFLTMGAANLIESFGTEEQKQRFLQPMIDGRFFG
TMALTEPHAGSSLSDIRTRAEPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDG
SLGKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSLEYA
RERPQGRVPDSKDPTTAPVAIIQHADVRRMLLTQKSYVEGAFDLGLYAARLFDDTTTLEIEAERKQAHELLDLLTPIVKS
WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIANTAERAV
PYESLTALREPLEKLVARLQSVTIGLLTDLAQGKVNSSLANSALYLKVFGHAVIGWRWLEQAIRAEEGLAKGNAADADFY
KGKLQAARYFLTWEVPGCQHELTLLEARDDTCLAMQDAWF

Sequences:

>Translated_600_residues
MSETLLSSRNLAFELYEVLDAEGLTRRERFAEHNRETFDAAIGTARNIAEKYFAPHNRKGDENEPRYENGQAILIPEVKP
AVDAFLEAGFLNAARSFDAGGMQLPTLLSQACFAHFQSANAASTSYPFLTMGAANLIESFGTEEQKQRFLQPMIDGRFFG
TMALTEPHAGSSLSDIRTRAEPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDG
SLGKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSLEYA
RERPQGRVPDSKDPTTAPVAIIQHADVRRMLLTQKSYVEGAFDLGLYAARLFDDTTTLEIEAERKQAHELLDLLTPIVKS
WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIANTAERAV
PYESLTALREPLEKLVARLQSVTIGLLTDLAQGKVNSSLANSALYLKVFGHAVIGWRWLEQAIRAEEGLAKGNAADADFY
KGKLQAARYFLTWEVPGCQHELTLLEARDDTCLAMQDAWF
>Mature_599_residues
SETLLSSRNLAFELYEVLDAEGLTRRERFAEHNRETFDAAIGTARNIAEKYFAPHNRKGDENEPRYENGQAILIPEVKPA
VDAFLEAGFLNAARSFDAGGMQLPTLLSQACFAHFQSANAASTSYPFLTMGAANLIESFGTEEQKQRFLQPMIDGRFFGT
MALTEPHAGSSLSDIRTRAEPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDGS
LGKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVGMGAVMLGYAGYLYSLEYAR
ERPQGRVPDSKDPTTAPVAIIQHADVRRMLLTQKSYVEGAFDLGLYAARLFDDTTTLEIEAERKQAHELLDLLTPIVKSW
PSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIANTAERAVP
YESLTALREPLEKLVARLQSVTIGLLTDLAQGKVNSSLANSALYLKVFGHAVIGWRWLEQAIRAEEGLAKGNAADADFYK
GKLQAARYFLTWEVPGCQHELTLLEARDDTCLAMQDAWF

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=425, Percent_Identity=26.8235294117647, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI4501857, Length=342, Percent_Identity=26.9005847953216, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI4501859, Length=319, Percent_Identity=30.0940438871473, Blast_Score=107, Evalue=5e-23,
Organism=Homo sapiens, GI4557233, Length=321, Percent_Identity=30.8411214953271, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI21361497, Length=316, Percent_Identity=30.379746835443, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI187960098, Length=376, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4557231, Length=376, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI226958412, Length=344, Percent_Identity=24.4186046511628, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI226958414, Length=344, Percent_Identity=24.4186046511628, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI4557235, Length=323, Percent_Identity=27.2445820433437, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI76496475, Length=323, Percent_Identity=27.2445820433437, Blast_Score=77, Evalue=6e-14,
Organism=Escherichia coli, GI87082384, Length=304, Percent_Identity=29.6052631578947, Blast_Score=97, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=318, Percent_Identity=27.6729559748428, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17533517, Length=375, Percent_Identity=26.1333333333333, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17569725, Length=334, Percent_Identity=29.6407185628743, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=325, Percent_Identity=28.3076923076923, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17534899, Length=323, Percent_Identity=28.1733746130031, Blast_Score=96, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI71985184, Length=311, Percent_Identity=26.6881028938907, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=325, Percent_Identity=26.1538461538462, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71985192, Length=162, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=363, Percent_Identity=26.1707988980716, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=362, Percent_Identity=25.6906077348066, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21356377, Length=324, Percent_Identity=29.0123456790123, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24666513, Length=319, Percent_Identity=29.153605015674, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24646207, Length=326, Percent_Identity=30.6748466257669, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281363737, Length=459, Percent_Identity=26.797385620915, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=27.3684210526316, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21355753, Length=391, Percent_Identity=26.3427109974425, Blast_Score=86, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 66226; Mature: 66095

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETLLSSRNLAFELYEVLDAEGLTRRERFAEHNRETFDAAIGTARNIAEKYFAPHNRKG
CCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
DENEPRYENGQAILIPEVKPAVDAFLEAGFLNAARSFDAGGMQLPTLLSQACFAHFQSAN
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
AASTSYPFLTMGAANLIESFGTEEQKQRFLQPMIDGRFFGTMALTEPHAGSSLSDIRTRA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHC
EPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDG
CCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCC
SLGKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIG
CCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
VGMGAVMLGYAGYLYSLEYARERPQGRVPDSKDPTTAPVAIIQHADVRRMLLTQKSYVEG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFDLGLYAARLFDDTTTLEIEAERKQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGH
HHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
GYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIANTAERAV
CCCCCCCHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PYESLTALREPLEKLVARLQSVTIGLLTDLAQGKVNSSLANSALYLKVFGHAVIGWRWLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEHHHHHHHHHHHHHH
QAIRAEEGLAKGNAADADFYKGKLQAARYFLTWEVPGCQHELTLLEARDDTCLAMQDAWF
HHHHHHHCCCCCCCCCCHHHHHHHEEEEEEEEEECCCCCCEEEEEECCCCCEEECCCCCC
>Mature Secondary Structure 
SETLLSSRNLAFELYEVLDAEGLTRRERFAEHNRETFDAAIGTARNIAEKYFAPHNRKG
CCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
DENEPRYENGQAILIPEVKPAVDAFLEAGFLNAARSFDAGGMQLPTLLSQACFAHFQSAN
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
AASTSYPFLTMGAANLIESFGTEEQKQRFLQPMIDGRFFGTMALTEPHAGSSLSDIRTRA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHC
EPASDGTYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDG
CCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCC
SLGKRNDVLLAGLFHKMGWRGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIG
CCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
VGMGAVMLGYAGYLYSLEYARERPQGRVPDSKDPTTAPVAIIQHADVRRMLLTQKSYVEG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFDLGLYAARLFDDTTTLEIEAERKQAHELLDLLTPIVKSWPSEFCLKANELAIQILGGH
HHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
GYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIANTAERAV
CCCCCCCHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PYESLTALREPLEKLVARLQSVTIGLLTDLAQGKVNSSLANSALYLKVFGHAVIGWRWLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEHHHHHHHHHHHHHH
QAIRAEEGLAKGNAADADFYKGKLQAARYFLTWEVPGCQHELTLLEARDDTCLAMQDAWF
HHHHHHHCCCCCCCCCCHHHHHHHEEEEEEEEEECCCCCCEEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]