| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456652
Identifier: 77456652
GI number: 77456652
Start: 483449
End: 483913
Strand: Reverse
Name: 77456652
Synonym: Pfl01_0424
Alternate gene names: NA
Gene position: 483913-483449 (Counterclockwise)
Preceding gene: 77456653
Following gene: 77456651
Centisome position: 7.52
GC content: 63.66
Gene sequence:
>465_bases ATGACCCACTGGCCGCTCGCCGAATTGCTGCCCCACGCTGGCGACATGATCCTGATCGACCGGATCCTGAGCTTTGACGA CGAACAGATCCACACCACGCTCACCGTCCGGCCCGGCGGCCTGTTCAGCCTGCCCGACGGCAGCCTGCCGGCGTGGGTCG GCGTTGAGCTGATGGCGCAAAGCGTCGCCGCGTTTGCCGGCTGCCATGCGCGGCAGAAAGGCAACCCGGTGGAGCTGGGC TTTCTGCTCGGCACACGCAAGTTCGAATGCAATGTCGCGGCCTTTCCGGTTGGCAGCGAACTGACCATCCATGGCCTGCG CTCGCTGGAAGACGACAACGGCATGGGTGTATTCGAATGCCATATCAATGCGCCCGGCATCGAGGCCAGCGCCCGGTTGA ACGTGTTCCGCCCGCCCCAGGCAGCGGACTATCTGGAACAATCCAAGGAGTCGAACGATGACTGA
Upstream 100 bases:
>100_bases CCGCAAGCGAACGCCTGGCGTCCATTGCACCTCGCTACCTGATGAGCAACTCGTTTGCCTTCGGTGGCAATAACGTCAGC CTGATTATCGGAGACGCCCC
Downstream 100 bases:
>100_bases ATCCATCCTGGTCACCGGCTCCAGCCGTGGCATCGGCCGCGCCATCGCCCTGCGCCTGGCCAGCGCCGGCCACGATATCG TCCTGCATTGCCGCAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase; Beta-Hydroxydecanoyl-ACP Dehydrase; Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; FabA-Like Domain-Containing Protein; Cation ABC Transporter Permease Protein; Beta-Ketoacyl Synthase; 3-Hydroxy-Fatty Acyl-(Acyl Carrier Protein) Dehydratase; -Hydroxymyristoyl-[Acyl Carrier Protein] Dehydratase
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTHWPLAELLPHAGDMILIDRILSFDDEQIHTTLTVRPGGLFSLPDGSLPAWVGVELMAQSVAAFAGCHARQKGNPVELG FLLGTRKFECNVAAFPVGSELTIHGLRSLEDDNGMGVFECHINAPGIEASARLNVFRPPQAADYLEQSKESNDD
Sequences:
>Translated_154_residues MTHWPLAELLPHAGDMILIDRILSFDDEQIHTTLTVRPGGLFSLPDGSLPAWVGVELMAQSVAAFAGCHARQKGNPVELG FLLGTRKFECNVAAFPVGSELTIHGLRSLEDDNGMGVFECHINAPGIEASARLNVFRPPQAADYLEQSKESNDD >Mature_153_residues THWPLAELLPHAGDMILIDRILSFDDEQIHTTLTVRPGGLFSLPDGSLPAWVGVELMAQSVAAFAGCHARQKGNPVELGF LLGTRKFECNVAAFPVGSELTIHGLRSLEDDNGMGVFECHINAPGIEASARLNVFRPPQAADYLEQSKESNDD
Specific function: Unknown
COG id: COG4706
COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16710; Mature: 16579
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHWPLAELLPHAGDMILIDRILSFDDEQIHTTLTVRPGGLFSLPDGSLPAWVGVELMAQ CCCCCHHHHCCCCCCEEEEHHHHCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHH SVAAFAGCHARQKGNPVELGFLLGTRKFECNVAAFPVGSELTIHGLRSLEDDNGMGVFEC HHHHHHHHHCCCCCCCEEEEEEECCCEEECEEEEECCCCCEEEEECCCCCCCCCCEEEEE HINAPGIEASARLNVFRPPQAADYLEQSKESNDD EECCCCCCCCCEEEEECCCCHHHHHHHHHCCCCC >Mature Secondary Structure THWPLAELLPHAGDMILIDRILSFDDEQIHTTLTVRPGGLFSLPDGSLPAWVGVELMAQ CCCCHHHHCCCCCCEEEEHHHHCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHH SVAAFAGCHARQKGNPVELGFLLGTRKFECNVAAFPVGSELTIHGLRSLEDDNGMGVFEC HHHHHHHHHCCCCCCCEEEEEEECCCEEECEEEEECCCCCEEEEECCCCCCCCCCEEEEE HINAPGIEASARLNVFRPPQAADYLEQSKESNDD EECCCCCCCCCEEEEECCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA