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The map label for this gene is occQ [H]

Identifier: 77456538

GI number: 77456538

Start: 356245

End: 356940

Strand: Reverse

Name: occQ [H]

Synonym: Pfl01_0310

Alternate gene names: 77456538

Gene position: 356940-356245 (Counterclockwise)

Preceding gene: 77456539

Following gene: 77456537

Centisome position: 5.54

GC content: 62.21

Gene sequence:

>696_bases
ATGATTATCGACCTCTACGGATTCGGCCCGGCGCTCTTCGCCGGCGCGCTGATGACCGTCAAACTGGCACTTTCGGCCCT
GTGCCTGGGGCTGGTGCTCGGTCTGCTCGGCGCCTTGGCCAAGACTTCCCCGTACAAGCCGTTGCAATGGCTTGGCGGAA
CCTATTCGACTCTGGTGCGCGGTGTCCCGGAATTGCTCTGGGTGCTGTTGATCTACTTCGGTACGGTCAACGCCATGCGC
GCGCTCGGCGAGTTCCTCGGCAATCCCGAACTGGAACTCAGCGCCTTTGCCGCCGGCGTCATTGCGCTGGGCCTGTGCTT
CGGCGCCTACGCCACGGAAGTGTTTCGTGGCGCGATCCTCGCCATTCCCAAAGGCCACCGTGAGGCCGGCGTGGCCTTGG
GCCTGTCGAAATGGCGGATCTTCACCAAATTGATCATGCCGCAGATGTGGCGCATCGCCCTGCCCGGCCTGGGCAACCTG
TTCATGATCCTGATGAAAGACACCGCGCTGGTGTCGGTCATCGGCCTGGAAGAAATCATGCGCCACGCGCAGATCGGCGT
GACCGTGTCCAAACAGCCATTCACCTTTTATATGGTGGCGGCGCTCATGTACCTGGGCCTGACCGTGCTGGCGATGATCG
GCATGCACCTGCTGGAAAAACGCGCCGCACGCGGCTTCGCGAGGAGCGCTCAATGA

Upstream 100 bases:

>100_bases
CTTCCCGTTCAGCATCTACTGATACTGACCTGCCGGATCGGCGCCGCCAAATGACGGCGCCGATCCCCGGCCTTGCCTGC
CGCGATTTGAAAAGAAATCC

Downstream 100 bases:

>100_bases
ATTGGGAAGTCATCATCAAGTGGCTGCCGAAACTGGCCCAGGGCGCAACGCTGACCCTGGAACTGGTGGCCATCGCCGTG
ATCGCCGGTTTGCTGCTGGC

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIIDLYGFGPALFAGALMTVKLALSALCLGLVLGLLGALAKTSPYKPLQWLGGTYSTLVRGVPELLWVLLIYFGTVNAMR
ALGEFLGNPELELSAFAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLGNL
FMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLLEKRAARGFARSAQ

Sequences:

>Translated_231_residues
MIIDLYGFGPALFAGALMTVKLALSALCLGLVLGLLGALAKTSPYKPLQWLGGTYSTLVRGVPELLWVLLIYFGTVNAMR
ALGEFLGNPELELSAFAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLGNL
FMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLLEKRAARGFARSAQ
>Mature_231_residues
MIIDLYGFGPALFAGALMTVKLALSALCLGLVLGLLGALAKTSPYKPLQWLGGTYSTLVRGVPELLWVLLIYFGTVNAMR
ALGEFLGNPELELSAFAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLGNL
FMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLLEKRAARGFARSAQ

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=42.9203539823009, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=39.1111111111111, Blast_Score=175, Evalue=2e-45,
Organism=Escherichia coli, GI1788226, Length=212, Percent_Identity=35.377358490566, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=34.9056603773585, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=30.952380952381, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1786873, Length=218, Percent_Identity=27.9816513761468, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1787086, Length=225, Percent_Identity=31.1111111111111, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786874, Length=221, Percent_Identity=25.3393665158371, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082239, Length=124, Percent_Identity=34.6774193548387, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24893; Mature: 24893

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDLYGFGPALFAGALMTVKLALSALCLGLVLGLLGALAKTSPYKPLQWLGGTYSTLVR
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
GVPELLWVLLIYFGTVNAMRALGEFLGNPELELSAFAAGVIALGLCFGAYATEVFRGAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLLEKRAARGFARSAQ
HHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIIDLYGFGPALFAGALMTVKLALSALCLGLVLGLLGALAKTSPYKPLQWLGGTYSTLVR
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
GVPELLWVLLIYFGTVNAMRALGEFLGNPELELSAFAAGVIALGLCFGAYATEVFRGAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLLEKRAARGFARSAQ
HHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA