| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is artJ [H]
Identifier: 77456539
GI number: 77456539
Start: 357019
End: 357765
Strand: Reverse
Name: artJ [H]
Synonym: Pfl01_0311
Alternate gene names: 77456539
Gene position: 357765-357019 (Counterclockwise)
Preceding gene: 77456540
Following gene: 77456538
Centisome position: 5.56
GC content: 57.3
Gene sequence:
>747_bases ATGCAGAACTACAAAAAGGTCTTCCTGGCCGCCGCCGTCACCCTCGCGTTCAGCGCCGGTGCCATGGCCGAGACCCTGAA GATGGGCATCGAAGCGGCTTACCCGCCGTTCAACAATAAAGACGCCAGCGGCAACGTCGTCGGCTTCGACAAAGACATCG GCGACGCCCTGTGCGCCAAGATGAAAGTTGAATGCTCCGTGGTCACCTCCGACTGGGACGGCATCATCCCGGCCCTGAAC GCCAAGAAGTTCGACTTTCTGATCTCCTCGATGTCGATCACCGACGAGCGCAAGGGCGCGGTGGACTTCACCGACCCGTA CTACTCCAACAAACTGCAATTCATCGCGCCGAAGGATAAAGAGTTCAAGACCGACAAGGACTCCCTCAAAGGCAAAGTGA TCGGCGCCCAGCGCGCGACCCTCGCCGGTACCTTCATGGAAGACAACATGCCGGGCGTCGAAGTAAAACTCTACGACACC CAGGAAAACGCCTACCTCGACCTGATCTCCGGTCGCCTGGACGGCATCCTCGCCGACAAATACGTCAACTACGAGTGGCT GAAAAGCGACGCCGGCAAAGCCTATGAATTCAAGGGCGATCCGGTGGAAGAAAGCGACAAGATCGGTATCGCTGTACGCA AAGGCGACCCGATCCGCGAGAAGCTGAATGCTGCGCTGAAGGAAATCGTTGCCGACGGCACCTACAAGAAGATCAACGAC AAGTACTTCCCGTTCAGCATCTACTGA
Upstream 100 bases:
>100_bases CTGGTAGAAGAGCAAGGATCGCCACAGCAGGTGTTCGAAAACCCGCTTTCGGCGCGCTGCAAACAATTCATGTCCAGCAA CCGCTAACGGAGCTACCCGC
Downstream 100 bases:
>100_bases TACTGACCTGCCGGATCGGCGCCGCCAAATGACGGCGCCGATCCCCGGCCTTGCCTGCCGCGATTTGAAAAGAAATCCAT GATTATCGACCTCTACGGAT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MQNYKKVFLAAAVTLAFSAGAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVECSVVTSDWDGIIPALN AKKFDFLISSMSITDERKGAVDFTDPYYSNKLQFIAPKDKEFKTDKDSLKGKVIGAQRATLAGTFMEDNMPGVEVKLYDT QENAYLDLISGRLDGILADKYVNYEWLKSDAGKAYEFKGDPVEESDKIGIAVRKGDPIREKLNAALKEIVADGTYKKIND KYFPFSIY
Sequences:
>Translated_248_residues MQNYKKVFLAAAVTLAFSAGAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVECSVVTSDWDGIIPALN AKKFDFLISSMSITDERKGAVDFTDPYYSNKLQFIAPKDKEFKTDKDSLKGKVIGAQRATLAGTFMEDNMPGVEVKLYDT QENAYLDLISGRLDGILADKYVNYEWLKSDAGKAYEFKGDPVEESDKIGIAVRKGDPIREKLNAALKEIVADGTYKKIND KYFPFSIY >Mature_248_residues MQNYKKVFLAAAVTLAFSAGAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVECSVVTSDWDGIIPALN AKKFDFLISSMSITDERKGAVDFTDPYYSNKLQFIAPKDKEFKTDKDSLKGKVIGAQRATLAGTFMEDNMPGVEVKLYDT QENAYLDLISGRLDGILADKYVNYEWLKSDAGKAYEFKGDPVEESDKIGIAVRKGDPIREKLNAALKEIVADGTYKKIND KYFPFSIY
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=244, Percent_Identity=44.2622950819672, Blast_Score=187, Evalue=7e-49, Organism=Escherichia coli, GI1788649, Length=249, Percent_Identity=39.7590361445783, Blast_Score=174, Evalue=4e-45, Organism=Escherichia coli, GI1787088, Length=245, Percent_Identity=40, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=36.1702127659575, Blast_Score=159, Evalue=1e-40, Organism=Escherichia coli, GI1788228, Length=222, Percent_Identity=32.8828828828829, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1787031, Length=247, Percent_Identity=34.412955465587, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27406; Mature: 27406
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNYKKVFLAAAVTLAFSAGAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAK CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHH MKVECSVVTSDWDGIIPALNAKKFDFLISSMSITDERKGAVDFTDPYYSNKLQFIAPKDK EEEEEEEEECCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC EFKTDKDSLKGKVIGAQRATLAGTFMEDNMPGVEVKLYDTQENAYLDLISGRLDGILADK CCCCCHHHCCEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEHHCCCCCEEHHH YVNYEWLKSDAGKAYEFKGDPVEESDKIGIAVRKGDPIREKLNAALKEIVADGTYKKIND HCCHHEECCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCC KYFPFSIY CCCCEEEC >Mature Secondary Structure MQNYKKVFLAAAVTLAFSAGAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAK CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHH MKVECSVVTSDWDGIIPALNAKKFDFLISSMSITDERKGAVDFTDPYYSNKLQFIAPKDK EEEEEEEEECCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC EFKTDKDSLKGKVIGAQRATLAGTFMEDNMPGVEVKLYDTQENAYLDLISGRLDGILADK CCCCCHHHCCEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEHHCCCCCEEHHH YVNYEWLKSDAGKAYEFKGDPVEESDKIGIAVRKGDPIREKLNAALKEIVADGTYKKIND HCCHHEECCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCC KYFPFSIY CCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]