| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is hslO
Identifier: 77456495
GI number: 77456495
Start: 313501
End: 314403
Strand: Direct
Name: hslO
Synonym: Pfl01_0267
Alternate gene names: 77456495
Gene position: 313501-314403 (Clockwise)
Preceding gene: 77456493
Following gene: 77456496
Centisome position: 4.87
GC content: 61.9
Gene sequence:
>903_bases ATGACCGATTTCCTCGATACCGATTACACCCAACGCTTCATCTTCGATGACAGCGACACGCGCGGCGAACTGGTGTCGCT GGAGCGCAGCTACGCCGAAGTGCTCGCCAAGCACCCGTACCCGGAACCGGTTGCGCAATTGCTGGGTGAACTGATGGCCG CCGCCTCGTTGCTGGTGGGCACCCTGAAATTCGATGGCTTGCTGATTCTTCAGGCCCGTTCCGAAGGCCCGATCCCGCTG CTGATGATCGAGTGCTCCAGCGAGCGCGAGATTCGTGGCCTGGCGCGCTACCACGCCGAGCAGATCCCGGCCGACGCAAC CCTTGGCGACCTGATGCCGAACGGTGTCCTGGCCTTGACCGTCGACCCGATCGCCGGCCAGCGTTATCAGGGCATCGTCG ACCTCGACGGCGAAACCCTGTCCGACTGCTTTACCAACTATTTCGTCATGTCCCAGCAGGTCGGCACTCGCTTCAAGCTC TGTGCCGATGGCCGTCGTGCCCGTGGTCTGCTGCTGCAGCAACTGCCGGCCGATCGCCTGAAAGACGAAGAAGAACGCGC CGCCAGCTGGCAGCACATCACCGCGCTGGGCAACACCCTGACCGCTGATGAACTGTTGAGCCTGGACAACGAAACGGTTC TGCATCGCCTCTACCATGAAGAGCAGGTTCGTCTGTTCGATGTGCAGAAACTGCGCTTCCACTGCAGCTGCTCCCGCGAG CGTTCGGGCAATGCACTGGTCAGCCTGGGTCTGGAAGATGCGCAGGCACTGGTGGCCGAGCAAGGTGGCCAGGTCGAGAT CGATTGCCAGTTCTGCAACCAGCGCTACCTGTTCGACGCGGCGGATATCGCTCAATTGTTCGCTGGCGCGGGCGTCGAGA CGCCGTCAGATACCCGGCACTAA
Upstream 100 bases:
>100_bases TGCCTCCCGTGGCTGAACATCGGCATCAAAAAGGATGCCAGAAGCGCGGGATTTTCATTCTTTGTAACCATTTTGTCATC ACATTCAGATACCCAGACCT
Downstream 100 bases:
>100_bases AACGGTTCAGCGCAGGTAAATTCACTGCTCAACGACGGAATTACGCCGTTACGACGGGAGGGCCCTACTCTTTTTGGGCT TTTCTGGCATAATCCGGCCC
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTDFLDTDYTQRFIFDDSDTRGELVSLERSYAEVLAKHPYPEPVAQLLGELMAAASLLVGTLKFDGLLILQARSEGPIPL LMIECSSEREIRGLARYHAEQIPADATLGDLMPNGVLALTVDPIAGQRYQGIVDLDGETLSDCFTNYFVMSQQVGTRFKL CADGRRARGLLLQQLPADRLKDEEERAASWQHITALGNTLTADELLSLDNETVLHRLYHEEQVRLFDVQKLRFHCSCSRE RSGNALVSLGLEDAQALVAEQGGQVEIDCQFCNQRYLFDAADIAQLFAGAGVETPSDTRH
Sequences:
>Translated_300_residues MTDFLDTDYTQRFIFDDSDTRGELVSLERSYAEVLAKHPYPEPVAQLLGELMAAASLLVGTLKFDGLLILQARSEGPIPL LMIECSSEREIRGLARYHAEQIPADATLGDLMPNGVLALTVDPIAGQRYQGIVDLDGETLSDCFTNYFVMSQQVGTRFKL CADGRRARGLLLQQLPADRLKDEEERAASWQHITALGNTLTADELLSLDNETVLHRLYHEEQVRLFDVQKLRFHCSCSRE RSGNALVSLGLEDAQALVAEQGGQVEIDCQFCNQRYLFDAADIAQLFAGAGVETPSDTRH >Mature_299_residues TDFLDTDYTQRFIFDDSDTRGELVSLERSYAEVLAKHPYPEPVAQLLGELMAAASLLVGTLKFDGLLILQARSEGPIPLL MIECSSEREIRGLARYHAEQIPADATLGDLMPNGVLALTVDPIAGQRYQGIVDLDGETLSDCFTNYFVMSQQVGTRFKLC ADGRRARGLLLQQLPADRLKDEEERAASWQHITALGNTLTADELLSLDNETVLHRLYHEEQVRLFDVQKLRFHCSCSRER SGNALVSLGLEDAQALVAEQGGQVEIDCQFCNQRYLFDAADIAQLFAGAGVETPSDTRH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=292, Percent_Identity=39.3835616438356, Blast_Score=224, Evalue=6e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_PSEPF (Q3KJP5)
Other databases:
- EMBL: CP000094 - RefSeq: YP_346000.1 - ProteinModelPortal: Q3KJP5 - SMR: Q3KJP5 - STRING: Q3KJP5 - GeneID: 3713254 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_0267 - eggNOG: COG1281 - HOGENOM: HBG296531 - OMA: GYIQNPG - ProtClustDB: PRK00114 - BioCyc: PFLU205922:PFL_0267-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 - Gene3D: G3DSA:1.10.287.480 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 33324; Mature: 33193
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFLDTDYTQRFIFDDSDTRGELVSLERSYAEVLAKHPYPEPVAQLLGELMAAASLLVG CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TLKFDGLLILQARSEGPIPLLMIECSSEREIRGLARYHAEQIPADATLGDLMPNGVLALT HEEECCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEE VDPIAGQRYQGIVDLDGETLSDCFTNYFVMSQQVGTRFKLCADGRRARGLLLQQLPADRL ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHC KDEEERAASWQHITALGNTLTADELLSLDNETVLHRLYHEEQVRLFDVQKLRFHCSCSRE CCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEHHHHHEEECCCCC RSGNALVSLGLEDAQALVAEQGGQVEIDCQFCNQRYLFDAADIAQLFAGAGVETPSDTRH CCCCEEEEECHHHHHHHHHCCCCEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TDFLDTDYTQRFIFDDSDTRGELVSLERSYAEVLAKHPYPEPVAQLLGELMAAASLLVG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TLKFDGLLILQARSEGPIPLLMIECSSEREIRGLARYHAEQIPADATLGDLMPNGVLALT HEEECCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEE VDPIAGQRYQGIVDLDGETLSDCFTNYFVMSQQVGTRFKLCADGRRARGLLLQQLPADRL ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHC KDEEERAASWQHITALGNTLTADELLSLDNETVLHRLYHEEQVRLFDVQKLRFHCSCSRE CCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEHHHHHEEECCCCC RSGNALVSLGLEDAQALVAEQGGQVEIDCQFCNQRYLFDAADIAQLFAGAGVETPSDTRH CCCCEEEEECHHHHHHHHHCCCCEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA