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The map label for this gene is hslR [H]

Identifier: 77456493

GI number: 77456493

Start: 312122

End: 312529

Strand: Direct

Name: hslR [H]

Synonym: Pfl01_0265

Alternate gene names: 77456493

Gene position: 312122-312529 (Clockwise)

Preceding gene: 77456489

Following gene: 77456495

Centisome position: 4.85

GC content: 60.05

Gene sequence:

>408_bases
ATGGCACAAAAAAGCGAAGAAGACGACAAGGTTCGTCTCGACAAGTGGCTGTGGGCCGCGCGTTTTTTCAAGACTCGCGC
TTTGGCCAAAGCCGCCATCGAGAGTGGCAAGGTGCATTGTCGGGGAGAGCGCTGCAAGCCCGGCAAAGAACCACGCATTG
GCGACGAATTCGAGATTCGCGCCGGCTTCGATGAGAAGACCGTGGTGGTTCAGGCCTTGTCGATCGTGCGTCGCGGCGCA
CCTGAGGCGCAGACGCTGTACGCCGAGACCGAGGCCAGCATTGCCAAACGTGAAGCGGCTGCGGCGATGCGCAAGGCAGG
CGCCCTGGGCGTGACCACCGATGGCAAACCGAGCAAGAAGCAGCGTCGGGATCTGTTTAAGTTTCGTGGGAACAGTAGCG
GCGAATAA

Upstream 100 bases:

>100_bases
GTTGAACCGGCGAAGATCACAGTTTATCTGGAGGGCCGAGTTCTTGCGCCCGACAGAATCGGTAGTACAGTTCCGACTAC
TGGCTGAACGAGGAATTCAT

Downstream 100 bases:

>100_bases
AAAAACGCAGCCTGACGGCCTGGGCTCAAGACCCGCCGGCGGCTGCGTTTTTTCAGTAACCGTTGATTACTGCGCGGACA
CCACGCTCATCCGCGAAACC

Product: RNA-binding S4

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAQKSEEDDKVRLDKWLWAARFFKTRALAKAAIESGKVHCRGERCKPGKEPRIGDEFEIRAGFDEKTVVVQALSIVRRGA
PEAQTLYAETEASIAKREAAAAMRKAGALGVTTDGKPSKKQRRDLFKFRGNSSGE

Sequences:

>Translated_135_residues
MAQKSEEDDKVRLDKWLWAARFFKTRALAKAAIESGKVHCRGERCKPGKEPRIGDEFEIRAGFDEKTVVVQALSIVRRGA
PEAQTLYAETEASIAKREAAAAMRKAGALGVTTDGKPSKKQRRDLFKFRGNSSGE
>Mature_134_residues
AQKSEEDDKVRLDKWLWAARFFKTRALAKAAIESGKVHCRGERCKPGKEPRIGDEFEIRAGFDEKTVVVQALSIVRRGAP
EAQTLYAETEASIAKREAAAAMRKAGALGVTTDGKPSKKQRRDLFKFRGNSSGE

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=124, Percent_Identity=52.4193548387097, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 14968; Mature: 14837

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKSEEDDKVRLDKWLWAARFFKTRALAKAAIESGKVHCRGERCKPGKEPRIGDEFEIR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEE
AGFDEKTVVVQALSIVRRGAPEAQTLYAETEASIAKREAAAAMRKAGALGVTTDGKPSKK
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
QRRDLFKFRGNSSGE
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
AQKSEEDDKVRLDKWLWAARFFKTRALAKAAIESGKVHCRGERCKPGKEPRIGDEFEIR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEE
AGFDEKTVVVQALSIVRRGAPEAQTLYAETEASIAKREAAAAMRKAGALGVTTDGKPSKK
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
QRRDLFKFRGNSSGE
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]