| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is phoP [C]
Identifier: 77456417
GI number: 77456417
Start: 228363
End: 229574
Strand: Direct
Name: phoP [C]
Synonym: Pfl01_0189
Alternate gene names: 77456417
Gene position: 228363-229574 (Clockwise)
Preceding gene: 77456416
Following gene: 77456420
Centisome position: 3.55
GC content: 65.18
Gene sequence:
>1212_bases ATGACGGCCGTCGATTTACCCGCTGTACCCCGAGTGCTGATTGCCGAGGCCGACCCGTGGTCTCGTGACCTGCTCAAACA AGTGTTGCTGAATGTGCGCTGCGATGCGCGGCTGGACCTGTGCGCCGATGGCCAGGAGGCAATGACGCTGCTCAGCGAAG TCCCTTATGACTTGGCGATCGTCGACTGGGAGTTGCCCGGCGTCGATGGCTTGAGCGTGTTGCGCAGTGTCCGCCAGCGC AAACGCAATCCGCCGCTGCCGTTCATTCTGATGAGCAGTCGCAACGACAGCGCCAGCGTGCGCGAAGCCTTGCCGCTGGC GCCGACAGCCTACCTGGCCAAACCCCTGAACATGGAAAGCCTGACCGAGCGTTTGCAAGGGCTGCTGCTCAATGCCGGCG AGGAAGTATTCTGTGAAGTGCCTGCACTGGCGCCAGGCATGACCCTCTCGGTGTTCCTCGAACGCCGCCGCGAGCAGGCC GACGGCGCACCGCTGATGACCGACGTGCAGGTGGCGGTCAAGCGCAGCCTCAATCCCAACGGCTTGGACCTGAAGCTGCT GGAAGAGGAAATCCGCACCGATCCGCAGATCACCGCCGTGTTGATCGCCGCCGCCAACAGCGCCGCCCAGCACCATGGCG CGCCGGTGCAGACCCTGGCGCAGGCGCTGCATCGTCTGGGCACCGGGCAGAGCATGAATCTGATTCTTGGCCTTGCACTC AAACGCAGCGCCCGGCTCAGCGACCCATGCCTGGCGGATTACGCCGAGCGCTATTGGGGCCTGTCGCTGCACACCGCCGA GTACGCCCGTACGCTGGCGCGGCTGCTCGATCTGGATCAGGAGCGCTGCTACTGCGCCGGGATGCTCCATCGCCTCGGCG ATCTCGCGTTGCTGCGTTGTCTTCAAGAGTGGAAGCAGGCCGGCGGTGAGCTGGATGAACTGGAGGAAGTCGGCGATGCG CTGGCGGAATTCGGTGCGGCGTACGGTTCGGCGTTGCGCACCCGCTGGCGGTTGCCGCTGGAGCTGCGCGAGCTGATTGC CTCGGTCTACCAGCTCGGTGGCGGGGTCTATTCCCGCGAGGCGCTGGTGATGAACATGGCGGCGCAGATGGCGCGGCTGA CCGAGCATGAGGGCGTTGAGGAGCTGGCGAAGAGCCGCACGGCGCGGTTGCTCAAGATCGGCCTGCCGGAGCTGATGCGG ATGCGCAAATAG
Upstream 100 bases:
>100_bases CGGCGGGTTTTTTCATGCCCGGGAAACACGGGCGCGGTTTTCAGGTTGTACCGAAACGCCAGCATTGGCTAAGGTTCAAG CATTGCAAGGGAGGGCGAGC
Downstream 100 bases:
>100_bases CGGTTTGATTGCGCATCCGGTCGGGAATCAGGCGGAAATGATCCGGTTCTTGCCCTGCCGTTTGGCCTCGTACATCGCTG CGTCCGCGCGGGCGAACAGG
Product: signal transduction protein
Products: NA
Alternate protein names: Response Regulator; Signal Transduction Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Chemotaxis-Related Response Regulator; Two-Component Response Regulator; Phosphate Regulon Transcriptional Regulatory Protein PhoB
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTAVDLPAVPRVLIAEADPWSRDLLKQVLLNVRCDARLDLCADGQEAMTLLSEVPYDLAIVDWELPGVDGLSVLRSVRQR KRNPPLPFILMSSRNDSASVREALPLAPTAYLAKPLNMESLTERLQGLLLNAGEEVFCEVPALAPGMTLSVFLERRREQA DGAPLMTDVQVAVKRSLNPNGLDLKLLEEEIRTDPQITAVLIAAANSAAQHHGAPVQTLAQALHRLGTGQSMNLILGLAL KRSARLSDPCLADYAERYWGLSLHTAEYARTLARLLDLDQERCYCAGMLHRLGDLALLRCLQEWKQAGGELDELEEVGDA LAEFGAAYGSALRTRWRLPLELRELIASVYQLGGGVYSREALVMNMAAQMARLTEHEGVEELAKSRTARLLKIGLPELMR MRK
Sequences:
>Translated_403_residues MTAVDLPAVPRVLIAEADPWSRDLLKQVLLNVRCDARLDLCADGQEAMTLLSEVPYDLAIVDWELPGVDGLSVLRSVRQR KRNPPLPFILMSSRNDSASVREALPLAPTAYLAKPLNMESLTERLQGLLLNAGEEVFCEVPALAPGMTLSVFLERRREQA DGAPLMTDVQVAVKRSLNPNGLDLKLLEEEIRTDPQITAVLIAAANSAAQHHGAPVQTLAQALHRLGTGQSMNLILGLAL KRSARLSDPCLADYAERYWGLSLHTAEYARTLARLLDLDQERCYCAGMLHRLGDLALLRCLQEWKQAGGELDELEEVGDA LAEFGAAYGSALRTRWRLPLELRELIASVYQLGGGVYSREALVMNMAAQMARLTEHEGVEELAKSRTARLLKIGLPELMR MRK >Mature_402_residues TAVDLPAVPRVLIAEADPWSRDLLKQVLLNVRCDARLDLCADGQEAMTLLSEVPYDLAIVDWELPGVDGLSVLRSVRQRK RNPPLPFILMSSRNDSASVREALPLAPTAYLAKPLNMESLTERLQGLLLNAGEEVFCEVPALAPGMTLSVFLERRREQAD GAPLMTDVQVAVKRSLNPNGLDLKLLEEEIRTDPQITAVLIAAANSAAQHHGAPVQTLAQALHRLGTGQSMNLILGLALK RSARLSDPCLADYAERYWGLSLHTAEYARTLARLLDLDQERCYCAGMLHRLGDLALLRCLQEWKQAGGELDELEEVGDAL AEFGAAYGSALRTRWRLPLELRELIASVYQLGGGVYSREALVMNMAAQMARLTEHEGVEELAKSRTARLLKIGLPELMRM RK
Specific function: Member Of The Two-Component Regulatory System Phoq/Phop Involved In The Regulation Of Acid Phosphatase. [C]
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44471; Mature: 44340
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVDLPAVPRVLIAEADPWSRDLLKQVLLNVRCDARLDLCADGQEAMTLLSEVPYDLAI CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE VDWELPGVDGLSVLRSVRQRKRNPPLPFILMSSRNDSASVREALPLAPTAYLAKPLNMES EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHCCCCHHH LTERLQGLLLNAGEEVFCEVPALAPGMTLSVFLERRREQADGAPLMTDVQVAVKRSLNPN HHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC GLDLKLLEEEIRTDPQITAVLIAAANSAAQHHGAPVQTLAQALHRLGTGQSMNLILGLAL CCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHH KRSARLSDPCLADYAERYWGLSLHTAEYARTLARLLDLDQERCYCAGMLHRLGDLALLRC HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LQEWKQAGGELDELEEVGDALAEFGAAYGSALRTRWRLPLELRELIASVYQLGGGVYSRE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH ALVMNMAAQMARLTEHEGVEELAKSRTARLLKIGLPELMRMRK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure TAVDLPAVPRVLIAEADPWSRDLLKQVLLNVRCDARLDLCADGQEAMTLLSEVPYDLAI CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE VDWELPGVDGLSVLRSVRQRKRNPPLPFILMSSRNDSASVREALPLAPTAYLAKPLNMES EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHCCCCHHH LTERLQGLLLNAGEEVFCEVPALAPGMTLSVFLERRREQADGAPLMTDVQVAVKRSLNPN HHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC GLDLKLLEEEIRTDPQITAVLIAAANSAAQHHGAPVQTLAQALHRLGTGQSMNLILGLAL CCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHH KRSARLSDPCLADYAERYWGLSLHTAEYARTLARLLDLDQERCYCAGMLHRLGDLALLRC HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LQEWKQAGGELDELEEVGDALAEFGAAYGSALRTRWRLPLELRELIASVYQLGGGVYSRE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH ALVMNMAAQMARLTEHEGVEELAKSRTARLLKIGLPELMRMRK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA