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The map label for this gene is ydhJ [H]

Identifier: 77456401

GI number: 77456401

Start: 207832

End: 208719

Strand: Direct

Name: ydhJ [H]

Synonym: Pfl01_0173

Alternate gene names: 77456401

Gene position: 207832-208719 (Clockwise)

Preceding gene: 77456400

Following gene: 77456402

Centisome position: 3.23

GC content: 63.51

Gene sequence:

>888_bases
ATGAAAAAACCGTTTCTGACCCTCGGTCGCGTCGTCCTGACGCTGCTGATCGTGACTTTCGCCGTCGTCGTGGTCTGGCG
CATGGTGATGTATTACATGTTCGCGCCCTGGACCCGCGACGGCCACATTCGCGCCGACATCGTGCAGATCGCCCCGGACG
TGTCCGGGCTGATCCAGCAGGTCGAAGTGAAGGACAACCAGTTGGTGAAGCGCGGCCAGGTGCTGTTCAGCATCGACCAG
GACCGTTTCAAACTGGCGCTGCGCCAGGCCAGGGCGGCGGTCGCCGATCGCGAAGAAACCCTGGCTCAGGCGCAGCGTGA
AGCCAAGCGTAACCGTGGTCTGGGCAATCTGGTGCCGGCCGAACAGCTGGAAGAAAGCCTGTCGAAAGTGGCCCGCGCGC
AATCGGCCCTGGCCGAAGCGCTGGTGGCGGTGGACAGCGCTCAGCTCAACCTCGATCGCTCGGTGATCCGCAGCCCGGTG
GACGGCTACGTCAACGACCGTGCGCCACGCTCGCAGGAATTCGTCACCGCCGGGCGTCCGGTGTTGTCGGTGGTCGACAG
CAATTCGTTCCACATCGACGGCTATTTCGAAGAGACCAAACTCGACGGCATCCATGTCGGGCAGTCGGTGGATATCCGCG
TGATCGGCGACCGCGCTCGCCTGCGCGGGCACGTCGAAAGCATCGTCGCCGGCATCGAAGACCGTGACCGTTCGAGCGGC
AGCAACCTGCTGCCCAACGTCAATCCGGCGTTCAGCTGGGTACGTCTGGCGCAACGGATTCCGGTGCGCATTGCCTTCGA
CGATGTGCCGGATGACTTCCGCATGATCGCCGGGCGTACCGCCACTGTGTCGATCATCGACGATCAACCGCAGGAGCCCG
CCAAATGA

Upstream 100 bases:

>100_bases
TGCATTTCTACCGTCTGGTCTGGCACCGGGCATTGTTCAACGTGGCTCTCTACGCCGTGATGCTGTACGGCGTGGATTCA
CTCAGTCGATACCTGATGAC

Downstream 100 bases:

>100_bases
GCAGGGCTCTGATGATCGCCGGTTTGGGCATGATGCTGTCGGCCTGCTCGATGGTCGGGCCGGACTACCACGTGCCCGAA
GACGCGGCGATCCAGCGCAA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKKPFLTLGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTRDGHIRADIVQIAPDVSGLIQQVEVKDNQLVKRGQVLFSIDQ
DRFKLALRQARAAVADREETLAQAQREAKRNRGLGNLVPAEQLEESLSKVARAQSALAEALVAVDSAQLNLDRSVIRSPV
DGYVNDRAPRSQEFVTAGRPVLSVVDSNSFHIDGYFEETKLDGIHVGQSVDIRVIGDRARLRGHVESIVAGIEDRDRSSG
SNLLPNVNPAFSWVRLAQRIPVRIAFDDVPDDFRMIAGRTATVSIIDDQPQEPAK

Sequences:

>Translated_295_residues
MKKPFLTLGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTRDGHIRADIVQIAPDVSGLIQQVEVKDNQLVKRGQVLFSIDQ
DRFKLALRQARAAVADREETLAQAQREAKRNRGLGNLVPAEQLEESLSKVARAQSALAEALVAVDSAQLNLDRSVIRSPV
DGYVNDRAPRSQEFVTAGRPVLSVVDSNSFHIDGYFEETKLDGIHVGQSVDIRVIGDRARLRGHVESIVAGIEDRDRSSG
SNLLPNVNPAFSWVRLAQRIPVRIAFDDVPDDFRMIAGRTATVSIIDDQPQEPAK
>Mature_295_residues
MKKPFLTLGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTRDGHIRADIVQIAPDVSGLIQQVEVKDNQLVKRGQVLFSIDQ
DRFKLALRQARAAVADREETLAQAQREAKRNRGLGNLVPAEQLEESLSKVARAQSALAEALVAVDSAQLNLDRSVIRSPV
DGYVNDRAPRSQEFVTAGRPVLSVVDSNSFHIDGYFEETKLDGIHVGQSVDIRVIGDRARLRGHVESIVAGIEDRDRSSG
SNLLPNVNPAFSWVRLAQRIPVRIAFDDVPDDFRMIAGRTATVSIIDDQPQEPAK

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=273, Percent_Identity=41.3919413919414, Blast_Score=222, Evalue=2e-59,
Organism=Escherichia coli, GI1789637, Length=297, Percent_Identity=38.3838383838384, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1790519, Length=316, Percent_Identity=29.4303797468354, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789041, Length=303, Percent_Identity=26.4026402640264, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788711, Length=316, Percent_Identity=24.3670886075949, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082036, Length=154, Percent_Identity=32.4675324675325, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32818; Mature: 32818

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPFLTLGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTRDGHIRADIVQIAPDVSGLIQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCHHHHHHH
VEVKDNQLVKRGQVLFSIDQDRFKLALRQARAAVADREETLAQAQREAKRNRGLGNLVPA
HHCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EQLEESLSKVARAQSALAEALVAVDSAQLNLDRSVIRSPVDGYVNDRAPRSQEFVTAGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCC
VLSVVDSNSFHIDGYFEETKLDGIHVGQSVDIRVIGDRARLRGHVESIVAGIEDRDRSSG
EEEEECCCCEEECCEECCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCC
SNLLPNVNPAFSWVRLAQRIPVRIAFDDVPDDFRMIAGRTATVSIIDDQPQEPAK
CCCCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKKPFLTLGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTRDGHIRADIVQIAPDVSGLIQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCHHHHHHH
VEVKDNQLVKRGQVLFSIDQDRFKLALRQARAAVADREETLAQAQREAKRNRGLGNLVPA
HHCCHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EQLEESLSKVARAQSALAEALVAVDSAQLNLDRSVIRSPVDGYVNDRAPRSQEFVTAGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCC
VLSVVDSNSFHIDGYFEETKLDGIHVGQSVDIRVIGDRARLRGHVESIVAGIEDRDRSSG
EEEEECCCCEEECCEECCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCC
SNLLPNVNPAFSWVRLAQRIPVRIAFDDVPDDFRMIAGRTATVSIIDDQPQEPAK
CCCCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]