Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456400

Identifier: 77456400

GI number: 77456400

Start: 207626

End: 207835

Strand: Direct

Name: 77456400

Synonym: Pfl01_0172

Alternate gene names: NA

Gene position: 207626-207835 (Clockwise)

Preceding gene: 77456399

Following gene: 77456401

Centisome position: 3.22

GC content: 54.29

Gene sequence:

>210_bases
ATGATCGGTGATCTGGACATCAGCGGCATATTCCTGCCGACCCTGCTGGTGTTGATGGGCATCACTTATGTGCTGTTTGT
GTTGGTACACGGCGTGCTCACACGCCTGCATTTCTACCGTCTGGTCTGGCACCGGGCATTGTTCAACGTGGCTCTCTACG
CCGTGATGCTGTACGGCGTGGATTCACTCAGTCGATACCTGATGACATGA

Upstream 100 bases:

>100_bases
TGTTGCATGCCTTGAGCGGTTTGCGCCTGGCGCTGTTGCCCGGCGTGGAATTCGTTTCCAACGCAGAGCCCGAAGAACCG
CTGCCCGAAGGAGCGCCCCT

Downstream 100 bases:

>100_bases
AAAAACCGTTTCTGACCCTCGGTCGCGTCGTCCTGACGCTGCTGATCGTGACTTTCGCCGTCGTCGTGGTCTGGCGCATG
GTGATGTATTACATGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MIGDLDISGIFLPTLLVLMGITYVLFVLVHGVLTRLHFYRLVWHRALFNVALYAVMLYGVDSLSRYLMT

Sequences:

>Translated_69_residues
MIGDLDISGIFLPTLLVLMGITYVLFVLVHGVLTRLHFYRLVWHRALFNVALYAVMLYGVDSLSRYLMT
>Mature_69_residues
MIGDLDISGIFLPTLLVLMGITYVLFVLVHGVLTRLHFYRLVWHRALFNVALYAVMLYGVDSLSRYLMT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7933; Mature: 7933

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGDLDISGIFLPTLLVLMGITYVLFVLVHGVLTRLHFYRLVWHRALFNVALYAVMLYGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLSRYLMT
HHHHHHHCC
>Mature Secondary Structure
MIGDLDISGIFLPTLLVLMGITYVLFVLVHGVLTRLHFYRLVWHRALFNVALYAVMLYGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLSRYLMT
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA