| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aaeB [H]
Identifier: 77456399
GI number: 77456399
Start: 205566
End: 207629
Strand: Direct
Name: aaeB [H]
Synonym: Pfl01_0171
Alternate gene names: 77456399
Gene position: 205566-207629 (Clockwise)
Preceding gene: 77456398
Following gene: 77456400
Centisome position: 3.19
GC content: 63.71
Gene sequence:
>2064_bases GTGAACGGGTTCTTTTCCGGCATGCCCCCCGCGCGGGACTGGTTCTACGGGATCCGCACGTTCGCGGCCTCGATGACCGC GCTGTACATCGCCTTGCTCATGCAGATGCCGCGTCCGTACTGGGCGATGGCCACGGTGTACATCGTTTCCAGTCCGTTCC TCGGCCCGACCAGTTCCAAGGCGCTGTATCGGGCGATCGGCACGTTTCTCGGTGCAGCGGCGGCGGTGCTGTTCGTGCCG ATGTTCGTCCAGAGCCCGTACGTGCTGGTGGTGGTCATCGCCTTGTGGACGGGGATTCTGCTGTTCCTGTCCCTGCACCT GCGCACCGCCAACAACTACGCGCTGATGCTGGCCGGCTACACCTTGCCGTTGATCGCTCTACCGGTGGTGGATAACCCGC TGGCGGTGTGGGACGTGGCCGAGTCGCGAACTGAAGAGATCTTCCTCGGCATCGCCGTGGCGGCGGTGGTCGGTGCGATG TTCTGGCCACGGCGCCTGGCACCGGTGTTCAACGATGCCGTGGGCAAATGGTTCGCCGACGCCACGACCTACAGCCTGAA ATTCCTCAGCCGCGACGTGCAGCCCGAAGCGGTCGCAGCCCTGCGCATGGCAATGGTCGGCAGTTTCAACAGCCTGGAAT TGATGATCGGCCAGTTGCCGCACGAAGGTGCGCGTCCGCAGACGGTGCGCAACACCAAGGAACTGCGCGGGCGGATGATC CACCTGCTGCCGGTGATCGACGCCCTTGAAGACTCGCTTTACGCCCTCGAACGGCGCACGCCCGAGCTGGTGGAAAAGTT CGCACCACTGCTCATCTCGACCCGCGAATGGCTTGGCCACAAAGACGCCGATCTGGAACGCTGGCAAGCGCTGCGGGATC AGCTCGAAGCGCTGCAACCGAGCGCCGAAGCCCTCGAAGATCGCAAGCAGTTGCTGTTTTCCAACGCGCTGTATCGCCTC GGCGAGTTCATCGATCTGTGGCAGGACTGCCGCAGCCTGCAGGACGCAATCCTGTGCGAGCGCCAGGACAGCTGGCGCGC GGTCTATCGTCACTGGCGCCTCGGTCGCCTGACGCCATTCATCGACCGCGGGCTGATGTTGTATTCGGTGGCCTCGACCA TCCTGGCGATCATCGTCGCTTCGGTACTGTGGATCCTGCTGGGCTGGACCGACGGCGGCAGCGCGGTGATTCTGGCGGCG GTGTCGTGCAGTTTCTTCGCCTCGATGGACGACCCGGCGCCGCAGATCTACCGGTTCTTTTTCTGGACCGGGATGTCGGT GCTGTTCGCCAGCCTGTACCTGTTTCTGGTGTTGCCGAACCTGCATGACTTTCCGATGCTGGTGCTGGCGTTCGCGGTGC CGTTCATCTGTGTCGGCACCCTGACGGTGCAGCCCCGTTTCTACCTCGGCATGCTGCTGACGCTGGTCAACACCTCGTCG TTCATCAGTATTTCCGGTGCTTACGACGCGGACTTCTTTGCCTTCGTCAATTCCAACCTGGCGGGCCCGATTGGGTTGTT GTTCGCGTTTATCTGGACCCTGATCGCCCGGCCGTTCGGCGCCGAACTGGCGGCCAAACGCCTGACCCGTTTCAGCTGGA AAGACATCGTCAGCATGACCGAACCGGCGAACCTCGCCGAACATCGACAACTCGGCGTGCAATTGCTCGACCGCCTGATG CAGCACCTGCCGCGTCTGGCGCTGACCGGGCAGGACACCGGCATCGCCATGCGCGAAGTGCGCGTGGGGCTGAACCTGCT CGACCTGCTCGCCTATACGCCGCGAGTGACGGGCGCGCCGAACGCGCTGCTCAAGCAAGTAGTGGCTGAGGTTGGCGAGT ATTTCCGGGCCTGTCTCAAGGCCGGGGAACGCCTGCCGGCGCCGAGCGCCCTGCTGATGACCATGGATCGCACCCGCCGT GCGCTCAGCGGCCACGGCGATGAAGACACCCGACTCAACCTGTTGCATGCCTTGAGCGGTTTGCGCCTGGCGCTGTTGCC CGGCGTGGAATTCGTTTCCAACGCAGAGCCCGAAGAACCGCTGCCCGAAGGAGCGCCCCTATGA
Upstream 100 bases:
>100_bases GTCATGAAGTGCTCGAAGGCATCGACCAGCGCGATCTGGAGGCTACGCTTCGAGTACTGAGAGCTTTCGAGGCGGCCACT CCGCCAACGGTGATCAATCC
Downstream 100 bases:
>100_bases TCGGTGATCTGGACATCAGCGGCATATTCCTGCCGACCCTGCTGGTGTTGATGGGCATCACTTATGTGCTGTTTGTGTTG GTACACGGCGTGCTCACACG
Product: fusaric acid resistance protein
Products: NA
Alternate protein names: pHBA efflux pump protein B [H]
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MNGFFSGMPPARDWFYGIRTFAASMTALYIALLMQMPRPYWAMATVYIVSSPFLGPTSSKALYRAIGTFLGAAAAVLFVP MFVQSPYVLVVVIALWTGILLFLSLHLRTANNYALMLAGYTLPLIALPVVDNPLAVWDVAESRTEEIFLGIAVAAVVGAM FWPRRLAPVFNDAVGKWFADATTYSLKFLSRDVQPEAVAALRMAMVGSFNSLELMIGQLPHEGARPQTVRNTKELRGRMI HLLPVIDALEDSLYALERRTPELVEKFAPLLISTREWLGHKDADLERWQALRDQLEALQPSAEALEDRKQLLFSNALYRL GEFIDLWQDCRSLQDAILCERQDSWRAVYRHWRLGRLTPFIDRGLMLYSVASTILAIIVASVLWILLGWTDGGSAVILAA VSCSFFASMDDPAPQIYRFFFWTGMSVLFASLYLFLVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFYLGMLLTLVNTSS FISISGAYDADFFAFVNSNLAGPIGLLFAFIWTLIARPFGAELAAKRLTRFSWKDIVSMTEPANLAEHRQLGVQLLDRLM QHLPRLALTGQDTGIAMREVRVGLNLLDLLAYTPRVTGAPNALLKQVVAEVGEYFRACLKAGERLPAPSALLMTMDRTRR ALSGHGDEDTRLNLLHALSGLRLALLPGVEFVSNAEPEEPLPEGAPL
Sequences:
>Translated_687_residues MNGFFSGMPPARDWFYGIRTFAASMTALYIALLMQMPRPYWAMATVYIVSSPFLGPTSSKALYRAIGTFLGAAAAVLFVP MFVQSPYVLVVVIALWTGILLFLSLHLRTANNYALMLAGYTLPLIALPVVDNPLAVWDVAESRTEEIFLGIAVAAVVGAM FWPRRLAPVFNDAVGKWFADATTYSLKFLSRDVQPEAVAALRMAMVGSFNSLELMIGQLPHEGARPQTVRNTKELRGRMI HLLPVIDALEDSLYALERRTPELVEKFAPLLISTREWLGHKDADLERWQALRDQLEALQPSAEALEDRKQLLFSNALYRL GEFIDLWQDCRSLQDAILCERQDSWRAVYRHWRLGRLTPFIDRGLMLYSVASTILAIIVASVLWILLGWTDGGSAVILAA VSCSFFASMDDPAPQIYRFFFWTGMSVLFASLYLFLVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFYLGMLLTLVNTSS FISISGAYDADFFAFVNSNLAGPIGLLFAFIWTLIARPFGAELAAKRLTRFSWKDIVSMTEPANLAEHRQLGVQLLDRLM QHLPRLALTGQDTGIAMREVRVGLNLLDLLAYTPRVTGAPNALLKQVVAEVGEYFRACLKAGERLPAPSALLMTMDRTRR ALSGHGDEDTRLNLLHALSGLRLALLPGVEFVSNAEPEEPLPEGAPL >Mature_687_residues MNGFFSGMPPARDWFYGIRTFAASMTALYIALLMQMPRPYWAMATVYIVSSPFLGPTSSKALYRAIGTFLGAAAAVLFVP MFVQSPYVLVVVIALWTGILLFLSLHLRTANNYALMLAGYTLPLIALPVVDNPLAVWDVAESRTEEIFLGIAVAAVVGAM FWPRRLAPVFNDAVGKWFADATTYSLKFLSRDVQPEAVAALRMAMVGSFNSLELMIGQLPHEGARPQTVRNTKELRGRMI HLLPVIDALEDSLYALERRTPELVEKFAPLLISTREWLGHKDADLERWQALRDQLEALQPSAEALEDRKQLLFSNALYRL GEFIDLWQDCRSLQDAILCERQDSWRAVYRHWRLGRLTPFIDRGLMLYSVASTILAIIVASVLWILLGWTDGGSAVILAA VSCSFFASMDDPAPQIYRFFFWTGMSVLFASLYLFLVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFYLGMLLTLVNTSS FISISGAYDADFFAFVNSNLAGPIGLLFAFIWTLIARPFGAELAAKRLTRFSWKDIVSMTEPANLAEHRQLGVQLLDRLM QHLPRLALTGQDTGIAMREVRVGLNLLDLLAYTPRVTGAPNALLKQVVAEVGEYFRACLKAGERLPAPSALLMTMDRTRR ALSGHGDEDTRLNLLHALSGLRLALLPGVEFVSNAEPEEPLPEGAPL
Specific function: Efflux pump whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell [H]
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=595, Percent_Identity=23.5294117647059, Blast_Score=115, Evalue=8e-27, Organism=Escherichia coli, GI1787933, Length=592, Percent_Identity=26.0135135135135, Blast_Score=109, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 76402; Mature: 76402
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGFFSGMPPARDWFYGIRTFAASMTALYIALLMQMPRPYWAMATVYIVSSPFLGPTSSK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHH ALYRAIGTFLGAAAAVLFVPMFVQSPYVLVVVIALWTGILLFLSLHLRTANNYALMLAGY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC TLPLIALPVVDNPLAVWDVAESRTEEIFLGIAVAAVVGAMFWPRRLAPVFNDAVGKWFAD HHHHHEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATTYSLKFLSRDVQPEAVAALRMAMVGSFNSLELMIGQLPHEGARPQTVRNTKELRGRMI HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH HLLPVIDALEDSLYALERRTPELVEKFAPLLISTREWLGHKDADLERWQALRDQLEALQP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC SAEALEDRKQLLFSNALYRLGEFIDLWQDCRSLQDAILCERQDSWRAVYRHWRLGRLTPF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH IDRGLMLYSVASTILAIIVASVLWILLGWTDGGSAVILAAVSCSFFASMDDPAPQIYRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH FWTGMSVLFASLYLFLVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFYLGMLLTLVNTSS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCCCC FISISGAYDADFFAFVNSNLAGPIGLLFAFIWTLIARPFGAELAAKRLTRFSWKDIVSMT EEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC EPANLAEHRQLGVQLLDRLMQHLPRLALTGQDTGIAMREVRVGLNLLDLLAYTPRVTGAP CCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC NALLKQVVAEVGEYFRACLKAGERLPAPSALLMTMDRTRRALSGHGDEDTRLNLLHALSG HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC LRLALLPGVEFVSNAEPEEPLPEGAPL CHHHHHCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNGFFSGMPPARDWFYGIRTFAASMTALYIALLMQMPRPYWAMATVYIVSSPFLGPTSSK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHH ALYRAIGTFLGAAAAVLFVPMFVQSPYVLVVVIALWTGILLFLSLHLRTANNYALMLAGY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC TLPLIALPVVDNPLAVWDVAESRTEEIFLGIAVAAVVGAMFWPRRLAPVFNDAVGKWFAD HHHHHEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATTYSLKFLSRDVQPEAVAALRMAMVGSFNSLELMIGQLPHEGARPQTVRNTKELRGRMI HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH HLLPVIDALEDSLYALERRTPELVEKFAPLLISTREWLGHKDADLERWQALRDQLEALQP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC SAEALEDRKQLLFSNALYRLGEFIDLWQDCRSLQDAILCERQDSWRAVYRHWRLGRLTPF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH IDRGLMLYSVASTILAIIVASVLWILLGWTDGGSAVILAAVSCSFFASMDDPAPQIYRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH FWTGMSVLFASLYLFLVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFYLGMLLTLVNTSS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCCCC FISISGAYDADFFAFVNSNLAGPIGLLFAFIWTLIARPFGAELAAKRLTRFSWKDIVSMT EEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC EPANLAEHRQLGVQLLDRLMQHLPRLALTGQDTGIAMREVRVGLNLLDLLAYTPRVTGAP CCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC NALLKQVVAEVGEYFRACLKAGERLPAPSALLMTMDRTRRALSGHGDEDTRLNLLHALSG HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC LRLALLPGVEFVSNAEPEEPLPEGAPL CHHHHHCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA